General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000575124
Gene ID:	ENSG00000006327
Gene Name:	TNFRSF12A
Sequence (UNICHARACTER ENCODING)	GCGGCGGGCGCAGGACGUGCACUAUGGCUCGGGGCUCGCUGCGCCGGUUGCUGCGGCUCCUCGUGCUGGGGCUCUGGCUGGCGUUGCUGCGCUCCGUGGCCGGGGAGCAAGCGCCAGGUACGCGGGACUCCGGGGUCGGGGAACCCCGGGCCGGGGCUCGGGAGCCGGACUGGGUGUCUGGAGAACAGCGCCGAACUGGGGGAACAGGCGGAUGUGGGGAUCUGGGGUCAGGUGGCCUUCAAACAGCUCGCUCCCGGCUGUGGGAAGUUCCAUCACUCUCCAAGCUUCAUUCACAAUCCGGGCCUCAGUUUCUCCCACCGUCCAAUUGGGGUUGGGGGGGGUCUUCAGUUCCACAAGUCCGAAGUACUUCGAAUGGAGAGAGAAAGCGCUGCAGCACCUCCUGCCCCCUUCCGGCUGCUUUGGCCCAPCCUUGGGGGCGCUCUGAGCCUGACCUUCGUGCUGGGGCUGCUUUCUGGCUUUUUGGUCUGGAGACGAUGCCGCAGGAGAGAGAAGUUCACCACCCCCAUAGAGGAGЖCCGGCGGAGAGGGCUGCCCAGCUGUGGCGCUGAUCCAGUGACAAUGUGCCCCCUGCCAGCCGGGGCUCGCCCACUCAUCAUUCAUUCAPCCAUUCUAGAGCCAGUCUCUGCCUCCCAGACGCGGCGGGAGCCAAGCUCCPCCAACCACAAGGGGGGUGGGGGGCGGUGAAUCACCUCUGAGGCCUGGGCCCAGGGUUCAGGGGAACCUUCCAAGGUGUCUGGUUGCCCUGCCUCUGGCUCCAGAЖCAGAAAGGGAGCCUCACGCUGGCUCACACAAAACAGCUGACACUGACUAAGGAЖCUGCAGCAUPUGCACAGGGGAGGGGGGUGCCCPCCUUCCUAGAGGCCCUGGGGGCCAGGCUGACUUGGGGGGCAGЖCUUGACACUAGGCCCCACUCACUCAGAUGUCCUGAAAUUCCACCACGGGGGUCACCCUGGGGGGUUAGGGACCUAUUUUUAЖCACUAGGGGGCUGGCCCACUAGGAGGGCUGGCCCUAAGAUACAGACCCCCCCAACUCCCCAAAGCGGGGAGGAGAUAUUUAUUUUGGGGAGAGUUUGGAGGGGAGGGAGAAUUUAUUAAUAAAAGAAUCUUUAACUUUAAA
Sequence (SHORT NAMES ENCODING)	GCGGCGGGCGCAGGACGUGCACUAUGGCUCGGGGCUCGCUGCGCCGGUUGCUGCGGCUCCUCGUGCUGGGGCUCUGGCUGGCGUUGCUGCGCUCCGUGGCCGGGGAGCAAGCGCCAGGUACGCGGGACUCCGGGGUCGGGGAACCCCGGGCCGGGGCUCGGGAGCCGGACUGGGUGUCUGGAGAACAGCGCCGAACUGGGGGAACAGGCGGAUGUGGGGAUCUGGGGUCAGGUGGCCUUCAAACAGCUCGCUCCCGGCUGUGGGAAGUUCCAUCACUCUCCAAGCUUCAUUCACAAUCCGGGCCUCAGUUUCUCCCACCGUCCAAUUGGGGUUGGGGGGGGUCUUCAGUUCCACAAGUCCGAAGUACUUCGAAUGGAGAGAGAAAGCGCUGCAGCACCUCCUGCCCCCUUCCGGCUGCUUUGGCCCAYCCUUGGGGGCGCUCUGAGCCUGACCUUCGUGCUGGGGCUGCUUUCUGGCUUUUUGGUCUGGAGACGAUGCCGCAGGAGAGAGAAGUUCACCACCCCCAUAGAGGAGm6ACCGGCGGAGAGGGCUGCCCAGCUGUGGCGCUGAUCCAGUGACAAUGUGCCCCCUGCCAGCCGGGGCUCGCCCACUCAUCAUUCAUUCAYCCAUUCUAGAGCCAGUCUCUGCCUCCCAGACGCGGCGGGAGCCAAGCUCCYCCAACCACAAGGGGGGUGGGGGGCGGUGAAUCACCUCUGAGGCCUGGGCCCAGGGUUCAGGGGAACCUUCCAAGGUGUCUGGUUGCCCUGCCUCUGGCUCCAGAm6ACAGAAAGGGAGCCUCACGCUGGCUCACACAAAACAGCUGACACUGACUAAGGAm6ACUGCAGCAUYUGCACAGGGGAGGGGGGUGCCCYCCUUCCUAGAGGCCCUGGGGGCCAGGCUGACUUGGGGGGCAGm6ACUUGACACUAGGCCCCACUCACUCAGAUGUCCUGAAAUUCCACCACGGGGGUCACCCUGGGGGGUUAGGGACCUAUUUUUAm6ACACUAGGGGGCUGGCCCACUAGGAGGGCUGGCCCUAAGAUACAGACCCCCCCAACUCCCCAAAGCGGGGAGGAGAUAUUUAUUUUGGGGAGAGUUUGGAGGGGAGGGAGAAUUUAUUAAUAAAAGAAUCUUUAACUUUAAA
Sequence (MODOMICS CODE ENCODING)	GCGGCGGGCGCAGGACGUGCACUAUGGCUCGGGGCUCGCUGCGCCGGUUGCUGCGGCUCCUCGUGCUGGGGCUCUGGCUGGCGUUGCUGCGCUCCGUGGCCGGGGAGCAAGCGCCAGGUACGCGGGACUCCGGGGUCGGGGAACCCCGGGCCGGGGCUCGGGAGCCGGACUGGGUGUCUGGAGAACAGCGCCGAACUGGGGGAACAGGCGGAUGUGGGGAUCUGGGGUCAGGUGGCCUUCAAACAGCUCGCUCCCGGCUGUGGGAAGUUCCAUCACUCUCCAAGCUUCAUUCACAAUCCGGGCCUCAGUUUCUCCCACCGUCCAAUUGGGGUUGGGGGGGGUCUUCAGUUCCACAAGUCCGAAGUACUUCGAAUGGAGAGAGAAAGCGCUGCAGCACCUCCUGCCCCCUUCCGGCUGCUUUGGCCCA2000000009UCCUUGGGGGCGCUCUGAGCCUGACCUUCGUGCUGGGGCUGCUUUCUGGCUUUUUGGUCUGGAGACGAUGCCGCAGGAGAGAGAAGUUCACCACCCCCAUAGAGGAG2000000006ACCGGCGGAGAGGGCUGCCCAGCUGUGGCGCUGAUCCAGUGACAAUGUGCCCCCUGCCAGCCGGGGCUCGCCCACUCAUCAUUCAUUCA2000000009UCCAUUCUAGAGCCAGUCUCUGCCUCCCAGACGCGGCGGGAGCCAAGCUCC2000000009UCCAACCACAAGGGGGGUGGGGGGCGGUGAAUCACCUCUGAGGCCUGGGCCCAGGGUUCAGGGGAACCUUCCAAGGUGUCUGGUUGCCCUGCCUCUGGCUCCAGA2000000006ACAGAAAGGGAGCCUCACGCUGGCUCACACAAAACAGCUGACACUGACUAAGGA2000000006ACUGCAGCAU2000000009UUGCACAGGGGAGGGGGGUGCCC2000000009UCCUUCCUAGAGGCCCUGGGGGCCAGGCUGACUUGGGGGGCAG2000000006ACUUGACACUAGGCCCCACUCACUCAGAUGUCCUGAAAUUCCACCACGGGGGUCACCCUGGGGGGUUAGGGACCUAUUUUUA2000000006ACACUAGGGGGCUGGCCCACUAGGAGGGCUGGCCCUAAGAUACAGACCCCCCCAACUCCCCAAAGCGGGGAGGAGAUAUUUAUUUUGGGGAGAGUUUGGAGGGGAGGGAGAAUUUAUUAAUAAAAGAAUCUUUAACUUUAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	428	535	624	675	780	834	844	867	910	992
Modification Positions	Y	m6A	Y	Y	m6A	m6A	Y	Y	m6A	m6A
Genomic Coordinates	16:3021597:+	16:3021785:+	16:3021874:+	16:3021925:+	16:3022030:+	16:3022084:+	16:3022094:+	16:3022117:+	16:3022160:+	16:3022242:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE JkWoGWVwjNda Yfn77uLS5tv8	bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE JkWoGWVwjNda Yfn77uLS5tv8