General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000703115
Gene ID:	ENSG00000103051
Gene Name:	COG4
Sequence (UNICHARACTER ENCODING)	GUAUACGAACGGCUCUGCGGCGAGGAGAAAGUGGUGGAGAGAGAGCUGGAUGCUCUUUUGGAЖCAGCAAAACACCAUUGAAAGUAAGAUGGUCACUCUCCACCGAAUGGGUCCUAAUCUGCAGCUGAUUGAGGGAGAUGCAAAGCAGCUGGCUGGAAUGAUCACCUPUACCUGCAACCUGGCUGAGAAUGUGUCCAGCAAAGUUCGUCAGCUUGACCUGGCCAAGAACCGCCUCUAUCAGGCCAUUCAGAGAGCUGAUGACAUCUUGGACCUGAAGUUCUGCAUGGAUGGAGUUCAGACUGCUUUGAGGAGUGAAGAUUAUGAGCAGGCUGCAGCACAUACUCAUCGCUACUUGUGCCUGGACAAGUCGGUCAUUGAGCUCAGCCGACAGGGCAAAGAGGGGAGCAUGAUUGAUGCCAACCUGAAAUUGCUGCAGGAAGCUGAGCAACGUCUCAAAGCCAUUGUGGCAGAGAAGUUUGCCAUUGCCACCAAGGAAGGUGAUCUGCCCCAGGUGGAGCGCUUCUUCAAGAUCUUCCCЖCUGCUGGGUUUGCAUGAGGAGGGAUUAAGAAAGUUCUCGGAGUACCUUUGCAAGCAGGUGGCCAGUAAAGCUGAGGAGAAUCUGCUCAUGGUGCUGGGGACAGACAUGAGUGAUCGGAGAGCUGCAGUCAUCUUUGCAGAUACACUUACUCUUCUGUUUGAAGGGAUUGCCCGCAUUGUGGAGACCCACCAGCCAAUAGUGGAGACCUAUUAUGGGCCAGGGAGACUCUAUACCCUGAUCAAAUAUCUGCAGUGAAAACAUCUCCACUCUGAAGAAGACACUGGAGAGUGACUGCACCAAGCUCUUCAGCCAGGGCAUUGGAGGGGAGCAGGCCCAGGCCAAGUUUGACAGCUGCCUUUCUGACUUGGCCGCCGUGUCCAACAAAUUCCGAGACCUCUUGCAGGAAGGGCUGACGGAGCUCAACAGCACAGCCAUCAAGCCACAGGUGCAGCCUUGGAUCAACAGCUUUUUCUCCGUCUCCCACAACAUCGAGGAGGAAGAAUUCAAUGACUAUGAGGCCAACGACCCUUGGGUACAACAGUUCAPCCUUAACCUGGAGCAGCAAAUGGCAGAGUUCAAGGCCAGCCUGUCCCCGGUCAUCUACGACAGCCUAACCGGCCUCAUGACUAGCCUUGUUGCCGUCGAGUUGGAGAAAGUGGUGCUGAAAUCCACCUPUAACCGGCUGGGUGGUCUGCAGUUUGACAAGGAGCUGAGGUCGCUCAUUGCCUACCUUACCACGGUGACCACCUGGACCAPCCGAGACAAGUUUGCCCGGCUCUCCCAGAUGGCCACCAPCCUCAAUCUGGAGCGGGUGACCGAGAUCCUCGAUUACUGGGGACCCAAUUCCGGCCCAUUGACGUGGCGCCUCACCCCUGCUGAAGUGCGCCAGGUGCUGGCCCUGCGGAUAGACUUCCGCAGUGAAGAUAUCAAGAGGCUGCGCCUGUAGCUGCCUGGAUGAGCACACCUGGCUCAUCACACUUGCAGGCC
Sequence (SHORT NAMES ENCODING)	GUAUACGAACGGCUCUGCGGCGAGGAGAAAGUGGUGGAGAGAGAGCUGGAUGCUCUUUUGGAm6ACAGCAAAACACCAUUGAAAGUAAGAUGGUCACUCUCCACCGAAUGGGUCCUAAUCUGCAGCUGAUUGAGGGAGAUGCAAAGCAGCUGGCUGGAAUGAUCACCUYUACCUGCAACCUGGCUGAGAAUGUGUCCAGCAAAGUUCGUCAGCUUGACCUGGCCAAGAACCGCCUCUAUCAGGCCAUUCAGAGAGCUGAUGACAUCUUGGACCUGAAGUUCUGCAUGGAUGGAGUUCAGACUGCUUUGAGGAGUGAAGAUUAUGAGCAGGCUGCAGCACAUACUCAUCGCUACUUGUGCCUGGACAAGUCGGUCAUUGAGCUCAGCCGACAGGGCAAAGAGGGGAGCAUGAUUGAUGCCAACCUGAAAUUGCUGCAGGAAGCUGAGCAACGUCUCAAAGCCAUUGUGGCAGAGAAGUUUGCCAUUGCCACCAAGGAAGGUGAUCUGCCCCAGGUGGAGCGCUUCUUCAAGAUCUUCCCm6ACUGCUGGGUUUGCAUGAGGAGGGAUUAAGAAAGUUCUCGGAGUACCUUUGCAAGCAGGUGGCCAGUAAAGCUGAGGAGAAUCUGCUCAUGGUGCUGGGGACAGACAUGAGUGAUCGGAGAGCUGCAGUCAUCUUUGCAGAUACACUUACUCUUCUGUUUGAAGGGAUUGCCCGCAUUGUGGAGACCCACCAGCCAAUAGUGGAGACCUAUUAUGGGCCAGGGAGACUCUAUACCCUGAUCAAAUAUCUGCAGUGAAAACAUCUCCACUCUGAAGAAGACACUGGAGAGUGACUGCACCAAGCUCUUCAGCCAGGGCAUUGGAGGGGAGCAGGCCCAGGCCAAGUUUGACAGCUGCCUUUCUGACUUGGCCGCCGUGUCCAACAAAUUCCGAGACCUCUUGCAGGAAGGGCUGACGGAGCUCAACAGCACAGCCAUCAAGCCACAGGUGCAGCCUUGGAUCAACAGCUUUUUCUCCGUCUCCCACAACAUCGAGGAGGAAGAAUUCAAUGACUAUGAGGCCAACGACCCUUGGGUACAACAGUUCAYCCUUAACCUGGAGCAGCAAAUGGCAGAGUUCAAGGCCAGCCUGUCCCCGGUCAUCUACGACAGCCUAACCGGCCUCAUGACUAGCCUUGUUGCCGUCGAGUUGGAGAAAGUGGUGCUGAAAUCCACCUYUAACCGGCUGGGUGGUCUGCAGUUUGACAAGGAGCUGAGGUCGCUCAUUGCCUACCUUACCACGGUGACCACCUGGACCAYCCGAGACAAGUUUGCCCGGCUCUCCCAGAUGGCCACCAYCCUCAAUCUGGAGCGGGUGACCGAGAUCCUCGAUUACUGGGGACCCAAUUCCGGCCCAUUGACGUGGCGCCUCACCCCUGCUGAAGUGCGCCAGGUGCUGGCCCUGCGGAUAGACUUCCGCAGUGAAGAUAUCAAGAGGCUGCGCCUGUAGCUGCCUGGAUGAGCACACCUGGCUCAUCACACUUGCAGGCC
Sequence (MODOMICS CODE ENCODING)	GUAUACGAACGGCUCUGCGGCGAGGAGAAAGUGGUGGAGAGAGAGCUGGAUGCUCUUUUGGA2000000006ACAGCAAAACACCAUUGAAAGUAAGAUGGUCACUCUCCACCGAAUGGGUCCUAAUCUGCAGCUGAUUGAGGGAGAUGCAAAGCAGCUGGCUGGAAUGAUCACCU2000000009UUACCUGCAACCUGGCUGAGAAUGUGUCCAGCAAAGUUCGUCAGCUUGACCUGGCCAAGAACCGCCUCUAUCAGGCCAUUCAGAGAGCUGAUGACAUCUUGGACCUGAAGUUCUGCAUGGAUGGAGUUCAGACUGCUUUGAGGAGUGAAGAUUAUGAGCAGGCUGCAGCACAUACUCAUCGCUACUUGUGCCUGGACAAGUCGGUCAUUGAGCUCAGCCGACAGGGCAAAGAGGGGAGCAUGAUUGAUGCCAACCUGAAAUUGCUGCAGGAAGCUGAGCAACGUCUCAAAGCCAUUGUGGCAGAGAAGUUUGCCAUUGCCACCAAGGAAGGUGAUCUGCCCCAGGUGGAGCGCUUCUUCAAGAUCUUCCC2000000006ACUGCUGGGUUUGCAUGAGGAGGGAUUAAGAAAGUUCUCGGAGUACCUUUGCAAGCAGGUGGCCAGUAAAGCUGAGGAGAAUCUGCUCAUGGUGCUGGGGACAGACAUGAGUGAUCGGAGAGCUGCAGUCAUCUUUGCAGAUACACUUACUCUUCUGUUUGAAGGGAUUGCCCGCAUUGUGGAGACCCACCAGCCAAUAGUGGAGACCUAUUAUGGGCCAGGGAGACUCUAUACCCUGAUCAAAUAUCUGCAGUGAAAACAUCUCCACUCUGAAGAAGACACUGGAGAGUGACUGCACCAAGCUCUUCAGCCAGGGCAUUGGAGGGGAGCAGGCCCAGGCCAAGUUUGACAGCUGCCUUUCUGACUUGGCCGCCGUGUCCAACAAAUUCCGAGACCUCUUGCAGGAAGGGCUGACGGAGCUCAACAGCACAGCCAUCAAGCCACAGGUGCAGCCUUGGAUCAACAGCUUUUUCUCCGUCUCCCACAACAUCGAGGAGGAAGAAUUCAAUGACUAUGAGGCCAACGACCCUUGGGUACAACAGUUCA2000000009UCCUUAACCUGGAGCAGCAAAUGGCAGAGUUCAAGGCCAGCCUGUCCCCGGUCAUCUACGACAGCCUAACCGGCCUCAUGACUAGCCUUGUUGCCGUCGAGUUGGAGAAAGUGGUGCUGAAAUCCACCU2000000009UUAACCGGCUGGGUGGUCUGCAGUUUGACAAGGAGCUGAGGUCGCUCAUUGCCUACCUUACCACGGUGACCACCUGGACCA2000000009UCCGAGACAAGUUUGCCCGGCUCUCCCAGAUGGCCACCA2000000009UCCUCAAUCUGGAGCGGGUGACCGAGAUCCUCGAUUACUGGGGACCCAAUUCCGGCCCAUUGACGUGGCGCCUCACCCCUGCUGAAGUGCGCCAGGUGCUGGCCCUGCGGAUAGACUUCCGCAGUGAAGAUAUCAAGAGGCUGCGCCUGUAGCUGCCUGGAUGAGCACACCUGGCUCAUCACACUUGCAGGCC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	63	167	537	1083	1212	1293	1332
Modification Positions	m6A	Y	m6A	Y	Y	Y	Y
Genomic Coordinates	16:70519696:-	16:70517684:-	16:70512296:-	16:70482126:-	16:70481771:-	16:70481414:-	16:70481375:-
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	bXBqJigD9oV3 Yfn77uLS5tv8	dA7YoLwHrzgR ksEP666umrV9	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8