General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000566540
Gene ID:	ENSG00000140650
Gene Name:	PMM2
Sequence (UNICHARACTER ENCODING)	GUGCCAACGUGUCUUGUAAGGUGCGGCUAGAAACUGGGGACAUGGCAGCGCCUGGCCCAGCGCUCUGCCUCUUCGACGUGGAUGGGACCCUCACCGCCCCGCGGCAGAAAAUUACCAAAGAAAUGGAUGACUUCCUACЖAAAAUUGAGGCAGAAGAUCAAAAUCGGAGUGGUAGGCGGAUCGGACUUUGAGAAAGUGCAGGAGCAACUGGGAAAUGAUGAAUAUUCAAAGUCAUCUGGGUGAGGCCCUAAUCCAAGAUUUAAUCAACUACUGUCUGAGCUACAUUGCGAAAAUUAAЖCUCCCGAAGAAGAGAAAGAAAAUAUAAGACAAAAGUUUGUAGCAGAUCUACGGAAAGAGUUUGCUGGAAAAGGCCUCACGUUUUCCAUAGGAGGCCAGAUCAGCUUUGAUGUCUUUCCUGAUGGAUGGGЖCAAGAGAUACUGUCUGCGACAUGUGGAAAAUGACGGUUAUAAGACCAUUUAUUUCUUUGGAGACAAAACUAUGCCAGGUGGCAAUGACCAUGAGAUCUUCACAGACCCCAGAACCAUGGGCUACUCCGUGACAGCGCCUGAGGACACGCGCAGGAUCUGUGAЖCUGCUGUUCUCCUAACGUGGGAGCGGGAGGGGCGGGGUCCCGGCUGACAAGCCAGCAUAGGGCAUUCGGUGGCCAGAGCCGAGGGUCCUCCCACACGUGCUCACCCACCCGCAGCCUAGGCAGGCUCUGCAUGCUAUGCCAGGCAUGUGCAGUCUGGЖCUUCCACCUCCAGUGCCAGAAACUUCCAGAAGGAAGGAGAAAACUCUUGUCAAGAAUGGCCCAGAGGAAUGCCUCGCACAAAAGGUCUUCCCCACCCACCCCCAGCCCCCUAGUCUAAUACCCACCCUGAUACGUGCAAUCAUGUAGUUUUGGCGGAAAUUUCCCCAUCAUUCUAGGAUGAUACAGAAAGAAAAЖCUGUGCCUGGACCCUCCCUCUUGGUGGGUCUGUGGAAACAUAAGCGGUUUUUUUAAUGGGCCCCUGCAUCAAUACCAAACAUGGGGGUUUGGUAAUGAGAAACCAGGACAGGCCAUCUGCAGUGACCCAGCCCAGGACGAAGUUUACЖAACACCPCCUGGAACGAAGCUCCCGCCUGCAUGUCACCUUGAUGGGGGCUGUGAGUGGGGCAGUGUGAUACCCAGUGЖCUAGACGCACUCUGCGUUUUCCCGUGUUUGGGGCUGAGGCCUGCUGGЖCAGAUGGCUGGCCAAGUGGGAGCAGACCCUAGGGAGUUUGCACCUCGGCUGGGCCGGAUUCGGACCGGCUCUGUGUUCACUACACUCAGAAUAGCCUGGCUGCUUCUCUGUCUCCGAGЖCCGGAGGUAGUGGGAACCAACAGCUGGGCUGGAGAGUUGGUGCUGGCAAAACAGUCCUUGCCCUGGGGCCGGUUCUUACCCAGGUCCAGAGAAACCAACGCGGGAUGUCAGACUUCACCAAAAGGЖCUUUCUGGUUGCCCCUGGCUGGCUUCCUGGAGGCGUUCGCCUCUAGUUUCUCAGGGAUGGAGCGAGAGCCCAGCCAGAGAЖCAGUAAGAGGAGCU
Sequence (SHORT NAMES ENCODING)	GUGCCAACGUGUCUUGUAAGGUGCGGCUAGAAACUGGGGACAUGGCAGCGCCUGGCCCAGCGCUCUGCCUCUUCGACGUGGAUGGGACCCUCACCGCCCCGCGGCAGAAAAUUACCAAAGAAAUGGAUGACUUCCUACm6AAAAAUUGAGGCAGAAGAUCAAAAUCGGAGUGGUAGGCGGAUCGGACUUUGAGAAAGUGCAGGAGCAACUGGGAAAUGAUGAAUAUUCAAAGUCAUCUGGGUGAGGCCCUAAUCCAAGAUUUAAUCAACUACUGUCUGAGCUACAUUGCGAAAAUUAAm6ACUCCCGAAGAAGAGAAAGAAAAUAUAAGACAAAAGUUUGUAGCAGAUCUACGGAAAGAGUUUGCUGGAAAAGGCCUCACGUUUUCCAUAGGAGGCCAGAUCAGCUUUGAUGUCUUUCCUGAUGGAUGGGm6ACAAGAGAUACUGUCUGCGACAUGUGGAAAAUGACGGUUAUAAGACCAUUUAUUUCUUUGGAGACAAAACUAUGCCAGGUGGCAAUGACCAUGAGAUCUUCACAGACCCCAGAACCAUGGGCUACUCCGUGACAGCGCCUGAGGACACGCGCAGGAUCUGUGAm6ACUGCUGUUCUCCUAACGUGGGAGCGGGAGGGGCGGGGUCCCGGCUGACAAGCCAGCAUAGGGCAUUCGGUGGCCAGAGCCGAGGGUCCUCCCACACGUGCUCACCCACCCGCAGCCUAGGCAGGCUCUGCAUGCUAUGCCAGGCAUGUGCAGUCUGGm6ACUUCCACCUCCAGUGCCAGAAACUUCCAGAAGGAAGGAGAAAACUCUUGUCAAGAAUGGCCCAGAGGAAUGCCUCGCACAAAAGGUCUUCCCCACCCACCCCCAGCCCCCUAGUCUAAUACCCACCCUGAUACGUGCAAUCAUGUAGUUUUGGCGGAAAUUUCCCCAUCAUUCUAGGAUGAUACAGAAAGAAAAm6ACUGUGCCUGGACCCUCCCUCUUGGUGGGUCUGUGGAAACAUAAGCGGUUUUUUUAAUGGGCCCCUGCAUCAAUACCAAACAUGGGGGUUUGGUAAUGAGAAACCAGGACAGGCCAUCUGCAGUGACCCAGCCCAGGACGAAGUUUACm6AAACACCYCCUGGAACGAAGCUCCCGCCUGCAUGUCACCUUGAUGGGGGCUGUGAGUGGGGCAGUGUGAUACCCAGUGm6ACUAGACGCACUCUGCGUUUUCCCGUGUUUGGGGCUGAGGCCUGCUGGm6ACAGAUGGCUGGCCAAGUGGGAGCAGACCCUAGGGAGUUUGCACCUCGGCUGGGCCGGAUUCGGACCGGCUCUGUGUUCACUACACUCAGAAUAGCCUGGCUGCUUCUCUGUCUCCGAGm6ACCGGAGGUAGUGGGAACCAACAGCUGGGCUGGAGAGUUGGUGCUGGCAAAACAGUCCUUGCCCUGGGGCCGGUUCUUACCCAGGUCCAGAGAAACCAACGCGGGAUGUCAGACUUCACCAAAAGGm6ACUUUCUGGUUGCCCCUGGCUGGCUUCCUGGAGGCGUUCGCCUCUAGUUUCUCAGGGAUGGAGCGAGAGCCCAGCCAGAGAm6ACAGUAAGAGGAGCU
Sequence (MODOMICS CODE ENCODING)	GUGCCAACGUGUCUUGUAAGGUGCGGCUAGAAACUGGGGACAUGGCAGCGCCUGGCCCAGCGCUCUGCCUCUUCGACGUGGAUGGGACCCUCACCGCCCCGCGGCAGAAAAUUACCAAAGAAAUGGAUGACUUCCUAC2000000006AAAAAUUGAGGCAGAAGAUCAAAAUCGGAGUGGUAGGCGGAUCGGACUUUGAGAAAGUGCAGGAGCAACUGGGAAAUGAUGAAUAUUCAAAGUCAUCUGGGUGAGGCCCUAAUCCAAGAUUUAAUCAACUACUGUCUGAGCUACAUUGCGAAAAUUAA2000000006ACUCCCGAAGAAGAGAAAGAAAAUAUAAGACAAAAGUUUGUAGCAGAUCUACGGAAAGAGUUUGCUGGAAAAGGCCUCACGUUUUCCAUAGGAGGCCAGAUCAGCUUUGAUGUCUUUCCUGAUGGAUGGG2000000006ACAAGAGAUACUGUCUGCGACAUGUGGAAAAUGACGGUUAUAAGACCAUUUAUUUCUUUGGAGACAAAACUAUGCCAGGUGGCAAUGACCAUGAGAUCUUCACAGACCCCAGAACCAUGGGCUACUCCGUGACAGCGCCUGAGGACACGCGCAGGAUCUGUGA2000000006ACUGCUGUUCUCCUAACGUGGGAGCGGGAGGGGCGGGGUCCCGGCUGACAAGCCAGCAUAGGGCAUUCGGUGGCCAGAGCCGAGGGUCCUCCCACACGUGCUCACCCACCCGCAGCCUAGGCAGGCUCUGCAUGCUAUGCCAGGCAUGUGCAGUCUGG2000000006ACUUCCACCUCCAGUGCCAGAAACUUCCAGAAGGAAGGAGAAAACUCUUGUCAAGAAUGGCCCAGAGGAAUGCCUCGCACAAAAGGUCUUCCCCACCCACCCCCAGCCCCCUAGUCUAAUACCCACCCUGAUACGUGCAAUCAUGUAGUUUUGGCGGAAAUUUCCCCAUCAUUCUAGGAUGAUACAGAAAGAAAA2000000006ACUGUGCCUGGACCCUCCCUCUUGGUGGGUCUGUGGAAACAUAAGCGGUUUUUUUAAUGGGCCCCUGCAUCAAUACCAAACAUGGGGGUUUGGUAAUGAGAAACCAGGACAGGCCAUCUGCAGUGACCCAGCCCAGGACGAAGUUUAC2000000006AAACACC2000000009UCCUGGAACGAAGCUCCCGCCUGCAUGUCACCUUGAUGGGGGCUGUGAGUGGGGCAGUGUGAUACCCAGUG2000000006ACUAGACGCACUCUGCGUUUUCCCGUGUUUGGGGCUGAGGCCUGCUGG2000000006ACAGAUGGCUGGCCAAGUGGGAGCAGACCCUAGGGAGUUUGCACCUCGGCUGGGCCGGAUUCGGACCGGCUCUGUGUUCACUACACUCAGAAUAGCCUGGCUGCUUCUCUGUCUCCGAG2000000006ACCGGAGGUAGUGGGAACCAACAGCUGGGCUGGAGAGUUGGUGCUGGCAAAACAGUCCUUGCCCUGGGGCCGGUUCUUACCCAGGUCCAGAGAAACCAACGCGGGAUGUCAGACUUCACCAAAAGG2000000006ACUUUCUGGUUGCCCCUGGCUGGCUUCCUGGAGGCGUUCGCCUCUAGUUUCUCAGGGAUGGAGCGAGAGCCCAGCCAGAGA2000000006ACAGUAAGAGGAGCU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	139	297	427	590	748	943	1091	1098	1169	1217	1336	1462	1543
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	16:8801830:+	16:8806393:+	16:8813030:+	16:8847810:+	16:8847968:+	16:8848163:+	16:8848311:+	16:8848318:+	16:8848389:+	16:8848437:+	16:8848556:+	16:8848682:+	16:8848763:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 Yfn77uLS5tv8	ArijeGVTwYBw KTLz8piFYdwC BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KTLz8piFYdwC BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 8cMbzB4aD5Se BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	ArijeGVTwYBw BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 93arJtwJmuS9 nfCHyrYzE6fB WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8