General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000568509
Gene ID:	ENSG00000197912
Gene Name:	SPG7
Sequence (UNICHARACTER ENCODING)	UGAAGCGCAGGGAGACAAAACGUCCACCUCUAGAGCCGAGGCGGCGGUUGCCUGUCGCGUGCCCGUGGUCUUCUGCCUGCCCCCGGACAUCUCGGGCCACGUCCGGCCCGGCCUCCGGCCGCGCUGCCCUAACGGGCGUCACGGGGCAUGAAGAGCUCUGGGCGGCUGCGAGGGGAGGGUACCGGGGCAGCGGGGCGGUCGCUCGGGGCUCCCGCGCGGUGACUCUUGCUCUGCCGUCGAAGAGAACGGCCCUCGGGCGCGUCGCGGCCGCGGCUCCAGAGCCCCUGGGCCUCGCGCUCUGAGAGCCUGAGCCGCUUGAGGAGGCCAAGCGCCCACGAACCGCAUUCCCUGCCUUGCUAGUUAGUUCUCCAACACGCGAAAAAGGUAGACGAGGACUGGUUUUCUUUGCAGCUAAAAUGAAUCAAGCCUCUGAGAUUAGUUGUCACUGUGUUGCCCAGGCUGGUCUUAAACUCCUAGGCUCGAAGGAGCCUUCUACCUCAGCCUCCCAAGUAGCUGAGACUAUAGGCGAGCACCUCCACAACAUGCACUUUUUAUUUCCUUUAUUUUAAUUUUUUUUUAUUUUUUUAUUAUUUUUAGAGAUGGGGUCUUGCUCCGUCACCCAGGCUGGAGUUCACUGCAGCCUCAAACUCCUGGGCUCACUCAACCCUCCUGCCUCAGCCUCCCAAAGUAUUAAGAUCACAGGCAUAAGCUACCACGCCCAGCCUGUACCUUUUAUUUCUUUUUAUUGCCUAAUUAUAGCCCUAUCCGUUUUGGUGUCAUUUUAAAGUCUAAAUAUAUGAUGUGUUUUUUUGUCAAUAUAUCACAAAUUACAUAUUUACAAUCCAACUGGGAAGCUUGGGAGUAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGUCGCCGGGCGCGGUGGCUCAUGCCUGUAAUCUUAGCACUUUGGGAGGCCAAGGUGGGCGGAUCACCUGAGGUCAGAAGUUCAAGACCAGCCUGGUCAACAUGGUGAAACCCGGGAGACGGUGGUUGCCGUGAGCCUAGAUCACCGCACUGCUGAGCGAGACUCCAUCUCAAAAAAAAAAAGAAAACUUCUCAGGACUUUUUCGUAAUAAGGCUGUCAUAAUACUGCCUGAUGUAUUUUAUGUAAUGAAUUGCAGЖCUGCAGAAAGCAGGGЖCUUAGCUGAGAAAAUUAAUCGUGCACUCAUUCAGCAAAGGUUUCAGGGCCUGCUGUGUGGAGACACGGUUCCAAGCACUGCUGCAGUAGCAGGGAGGAAACAGAACGGЖCCUCAAACGCUGUCCCAGCAAGGЖCUCCAGUCUCUGCCUUGUGGAUGUGUAACUGGCACAUGAUGUACCAGAAЖCUCCUGUGUGUGGUUGUAUCCGGUGCGUGACACAGUЖCUCUCUCCAGCUGCUCCUUGGAUUUGGGAAGCAGCCGAAGAUUUACGGGCCAUGGAGGCUCCUUCUAUCCCUGGAAAUCGGCCCUUGGGAAUUAAGCUGAGUUAUGUGGUUAAAGCCGUCAUGACAGCCAUCCCCUGGCUGGGCCAGUUCUGGGAAUAЖCUAUAAUGCUUAUACUACAGGAUGGCCAAUUCAGAACUUCUUACUAGUGCUGAAUUCAAUAAAGGUUUAAUAACACAUUU
Sequence (SHORT NAMES ENCODING)	UGAAGCGCAGGGAGACAAAACGUCCACCUCUAGAGCCGAGGCGGCGGUUGCCUGUCGCGUGCCCGUGGUCUUCUGCCUGCCCCCGGACAUCUCGGGCCACGUCCGGCCCGGCCUCCGGCCGCGCUGCCCUAACGGGCGUCACGGGGCAUGAAGAGCUCUGGGCGGCUGCGAGGGGAGGGUACCGGGGCAGCGGGGCGGUCGCUCGGGGCUCCCGCGCGGUGACUCUUGCUCUGCCGUCGAAGAGAACGGCCCUCGGGCGCGUCGCGGCCGCGGCUCCAGAGCCCCUGGGCCUCGCGCUCUGAGAGCCUGAGCCGCUUGAGGAGGCCAAGCGCCCACGAACCGCAUUCCCUGCCUUGCUAGUUAGUUCUCCAACACGCGAAAAAGGUAGACGAGGACUGGUUUUCUUUGCAGCUAAAAUGAAUCAAGCCUCUGAGAUUAGUUGUCACUGUGUUGCCCAGGCUGGUCUUAAACUCCUAGGCUCGAAGGAGCCUUCUACCUCAGCCUCCCAAGUAGCUGAGACUAUAGGCGAGCACCUCCACAACAUGCACUUUUUAUUUCCUUUAUUUUAAUUUUUUUUUAUUUUUUUAUUAUUUUUAGAGAUGGGGUCUUGCUCCGUCACCCAGGCUGGAGUUCACUGCAGCCUCAAACUCCUGGGCUCACUCAACCCUCCUGCCUCAGCCUCCCAAAGUAUUAAGAUCACAGGCAUAAGCUACCACGCCCAGCCUGUACCUUUUAUUUCUUUUUAUUGCCUAAUUAUAGCCCUAUCCGUUUUGGUGUCAUUUUAAAGUCUAAAUAUAUGAUGUGUUUUUUUGUCAAUAUAUCACAAAUUACAUAUUUACAAUCCAACUGGGAAGCUUGGGAGUAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGUCGCCGGGCGCGGUGGCUCAUGCCUGUAAUCUUAGCACUUUGGGAGGCCAAGGUGGGCGGAUCACCUGAGGUCAGAAGUUCAAGACCAGCCUGGUCAACAUGGUGAAACCCGGGAGACGGUGGUUGCCGUGAGCCUAGAUCACCGCACUGCUGAGCGAGACUCCAUCUCAAAAAAAAAAAGAAAACUUCUCAGGACUUUUUCGUAAUAAGGCUGUCAUAAUACUGCCUGAUGUAUUUUAUGUAAUGAAUUGCAGm6ACUGCAGAAAGCAGGGm6ACUUAGCUGAGAAAAUUAAUCGUGCACUCAUUCAGCAAAGGUUUCAGGGCCUGCUGUGUGGAGACACGGUUCCAAGCACUGCUGCAGUAGCAGGGAGGAAACAGAACGGm6ACCUCAAACGCUGUCCCAGCAAGGm6ACUCCAGUCUCUGCCUUGUGGAUGUGUAACUGGCACAUGAUGUACCAGAAm6ACUCCUGUGUGUGGUUGUAUCCGGUGCGUGACACAGUm6ACUCUCUCCAGCUGCUCCUUGGAUUUGGGAAGCAGCCGAAGAUUUACGGGCCAUGGAGGCUCCUUCUAUCCCUGGAAAUCGGCCCUUGGGAAUUAAGCUGAGUUAUGUGGUUAAAGCCGUCAUGACAGCCAUCCCCUGGCUGGGCCAGUUCUGGGAAUAm6ACUAUAAUGCUUAUACUACAGGAUGGCCAAUUCAGAACUUCUUACUAGUGCUGAAUUCAAUAAAGGUUUAAUAACACAUUU
Sequence (MODOMICS CODE ENCODING)	UGAAGCGCAGGGAGACAAAACGUCCACCUCUAGAGCCGAGGCGGCGGUUGCCUGUCGCGUGCCCGUGGUCUUCUGCCUGCCCCCGGACAUCUCGGGCCACGUCCGGCCCGGCCUCCGGCCGCGCUGCCCUAACGGGCGUCACGGGGCAUGAAGAGCUCUGGGCGGCUGCGAGGGGAGGGUACCGGGGCAGCGGGGCGGUCGCUCGGGGCUCCCGCGCGGUGACUCUUGCUCUGCCGUCGAAGAGAACGGCCCUCGGGCGCGUCGCGGCCGCGGCUCCAGAGCCCCUGGGCCUCGCGCUCUGAGAGCCUGAGCCGCUUGAGGAGGCCAAGCGCCCACGAACCGCAUUCCCUGCCUUGCUAGUUAGUUCUCCAACACGCGAAAAAGGUAGACGAGGACUGGUUUUCUUUGCAGCUAAAAUGAAUCAAGCCUCUGAGAUUAGUUGUCACUGUGUUGCCCAGGCUGGUCUUAAACUCCUAGGCUCGAAGGAGCCUUCUACCUCAGCCUCCCAAGUAGCUGAGACUAUAGGCGAGCACCUCCACAACAUGCACUUUUUAUUUCCUUUAUUUUAAUUUUUUUUUAUUUUUUUAUUAUUUUUAGAGAUGGGGUCUUGCUCCGUCACCCAGGCUGGAGUUCACUGCAGCCUCAAACUCCUGGGCUCACUCAACCCUCCUGCCUCAGCCUCCCAAAGUAUUAAGAUCACAGGCAUAAGCUACCACGCCCAGCCUGUACCUUUUAUUUCUUUUUAUUGCCUAAUUAUAGCCCUAUCCGUUUUGGUGUCAUUUUAAAGUCUAAAUAUAUGAUGUGUUUUUUUGUCAAUAUAUCACAAAUUACAUAUUUACAAUCCAACUGGGAAGCUUGGGAGUAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGUCGCCGGGCGCGGUGGCUCAUGCCUGUAAUCUUAGCACUUUGGGAGGCCAAGGUGGGCGGAUCACCUGAGGUCAGAAGUUCAAGACCAGCCUGGUCAACAUGGUGAAACCCGGGAGACGGUGGUUGCCGUGAGCCUAGAUCACCGCACUGCUGAGCGAGACUCCAUCUCAAAAAAAAAAAGAAAACUUCUCAGGACUUUUUCGUAAUAAGGCUGUCAUAAUACUGCCUGAUGUAUUUUAUGUAAUGAAUUGCAG2000000006ACUGCAGAAAGCAGGG2000000006ACUUAGCUGAGAAAAUUAAUCGUGCACUCAUUCAGCAAAGGUUUCAGGGCCUGCUGUGUGGAGACACGGUUCCAAGCACUGCUGCAGUAGCAGGGAGGAAACAGAACGG2000000006ACCUCAAACGCUGUCCCAGCAAGG2000000006ACUCCAGUCUCUGCCUUGUGGAUGUGUAACUGGCACAUGAUGUACCAGAA2000000006ACUCCUGUGUGUGGUUGUAUCCGGUGCGUGACACAGU2000000006ACUCUCUCCAGCUGCUCCUUGGAUUUGGGAAGCAGCCGAAGAUUUACGGGCCAUGGAGGCUCCUUCUAUCCCUGGAAAUCGGCCCUUGGGAAUUAAGCUGAGUUAUGUGGUUAAAGCCGUCAUGACAGCCAUCCCCUGGCUGGGCCAGUUCUGGGAAUA2000000006ACUAUAAUGCUUAUACUACAGGAUGGCCAAUUCAGAACUUCUUACUAGUGCUGAAUUCAAUAAAGGUUUAAUAACACAUUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1157	1173	1282	1306	1356	1393	1552
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	16:89498810:+	16:89498826:+	16:89498935:+	16:89498959:+	16:89499009:+	16:89499046:+	16:89499205:+
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv jNkxUQNx8GRd VL7zkHvkfkoB	6UuHp6YApVKv jNkxUQNx8GRd VL7zkHvkfkoB VyCX26p5UBRL	5FhTyQVy2tKW 6UuHp6YApVKv Ap2q43bQLNek gZuvgwMuBfgh msuJfBpJvM5H nGifePrmgHfe VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe VL7zkHvkfkoB WdHxkJGRmFxn Lny8GcCeVGc9