General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000697765
Gene ID:	ENSG00000259153
Gene Name:	MAP3K9-DT
Sequence (UNICHARACTER ENCODING)	AAACUAAAAGGCUGGAAGGGAGGCAGCUGCCUUUGUUUGCCAUGGAUGGGUAGGGGCUGCACUGAGCAGCACCGGUGUUCUUCAUCCGGCUGCACCCCCAACAGAGCUCUUUCUUCCCCAGAUCCCUUUUACAGUUGGAUUCUCCCUCUUGGAUCUGGCUCUGCCUUAGUCCGACCUAGAGGGAUCAGCUUCGCCCACGCCCACUCUCACCCGGAACCUUUCAUCUCUUAUUGAAGCCUUUUAGGCCCAUUGGGAUGUUCAUUAGAЖCUCUGAAAACUACAGUUCUCCCCUUUAUGAGGЖCUGCACCACAGCUCGCCCUCUCCUGGGUUCCGGUAAGAAGAGAUUCCAAUACCACUCUUUUUUCAGAAUUCAGAAAGGCAAGAGACCACCUUACUGAGCUUCAAЖCUGGGGCUGGGAACGCUGCCAUGAAUUGGGCUUGGUCUGUCUGAAGGGAGCCACCUUUUCGACAAUCCUUAGЖCUUCUUUUGCCUGUUGGAAUUACACCUUGGAUCGUGGCGAAGUCUAUAGAGGUCAGAUUAAGAAGAACCAAAGCAGAAUAAACGUAGAACCCGAUGCUGAGUUCACGAGUGAGGACGACCUCUUCCUAUAUGCUUUGCUAUACCCUGCGUUUUGAЖCAUUAAGGACGAGAUAGGAGGCCCAUAAUGUUUCUUCUUGCUUUAAUCCUGUCGUGGCAACGUUGACUUCCAGGUCUCAGUUUGUUGUCCAGGCCAGAGUGCAGUGGCGCAAUCUCGGCUCACUGCAGCCUCAACAUCCUAGGCUCAAGCCAUCCUCCCACCUCACCCUCCCGAGUAGCUGGAAGUACAGGCUCGUCUUGAACUCUGGGCUGAAGUCAUCCACCUGCCUCGGCCUCCCAAAGUGCUAGGAUUACAGGCCUUAGCCACCUCACCUAGUCCUCUGAAAUUUCUAAAUAAGCCAGUGCUGAAGGAUCUAGCCCAACUUCUACCAAACUUUGUUACCUUUUCCCCUUCAGUGGUAGGAAUAGACAUGAUUUAUUUAGCAAGGGUGAGUGCUUUUGUUGAAUUUUAGUUUGGGGUUUAUUAUUACACAAACUAAAGACAGCGGGGCAAUUUGGAAAGAUAACUAGGCAGCUGCAUGACUUCAGGCAGGUGUCCUAACACUGUACUCUUAAAGUGAGGGGAGUGAACUGGAAGAUAUCCUGUGUCCUCAUAGUUUGAACAUUCUGUGGUUCGCUCAUCAAUAUGACUACACUGUAUAGUCAUAGCACACAUUUGAGGUCUUGAAGAAGAGAGAUGAGGCUUGUUCUAAAAAGCAUCCAGAGUAGGUCUUGAAAAAGGAUUUCUGUUUAAGUAAAGACCUAAAACAAUGCUCAGAUUCCUAUUAUACAUAGGAUCCAUGAACUGGAAAAGAUAUGGAUGAGUCUGAGUAAAUUAUCUAGGUUUUGUUUUAGACAAAACCAUUCCACUGUCAAGCAGCAGAGAGCAAGGGAGUGGGGAUGGAGGUAUAUUGUGUUUUUUUAAAGGCCAUAAGAAAAUAAUUGUCUUGAUAAAAUUUUAACUUAGGACUGGGUAUGGUGGCUCGUGCCUGAAAUCUCAGCAGUUUGGGAGGCUGAGGCAGGAGGAUCACUUGAGCCCAGGAAGGAGACCAGCCUGAGCAACAUGGCGAGACCCCUAUCUCUACAAAAAAUGUUAAAAUUUGCCAGGCAUGGUGGUGCAAGCCUGUAGUCCCAGCUGUUUGAGAGGCUGAGGCAGGAAGAUUGCUUGAACCUAGGAGGUCAAGGCUGUAGUGAACAGUGUUUGCUAUACCACAUUCCAAUCUGGUGACAAAGCAAGACCCUGUCUCAAAAAAAAGAAUUUUUUUUAACUUGAGGGAAAAAAAGUUUUACAAACUGUAGACACACAGCAAAACAGAAACAGGAAAAAAAGUACUAAAAAGAGAAAAAUGUCAGUAGUGGGUCUCUAAGUAGUCGGAUUAUGAGUAAUUGGCCUGGUUGCAGAGUGAGCCCAUGGGЖCAGCCCUCUGAAAUUAUACUGCUUACAACCAUGCUGAGUCUGCAAGGЖCUUCGUCCAAGCCUUUCCGUCCAGGACCUCAA
Sequence (SHORT NAMES ENCODING)	AAACUAAAAGGCUGGAAGGGAGGCAGCUGCCUUUGUUUGCCAUGGAUGGGUAGGGGCUGCACUGAGCAGCACCGGUGUUCUUCAUCCGGCUGCACCCCCAACAGAGCUCUUUCUUCCCCAGAUCCCUUUUACAGUUGGAUUCUCCCUCUUGGAUCUGGCUCUGCCUUAGUCCGACCUAGAGGGAUCAGCUUCGCCCACGCCCACUCUCACCCGGAACCUUUCAUCUCUUAUUGAAGCCUUUUAGGCCCAUUGGGAUGUUCAUUAGAm6ACUCUGAAAACUACAGUUCUCCCCUUUAUGAGGm6ACUGCACCACAGCUCGCCCUCUCCUGGGUUCCGGUAAGAAGAGAUUCCAAUACCACUCUUUUUUCAGAAUUCAGAAAGGCAAGAGACCACCUUACUGAGCUUCAAm6ACUGGGGCUGGGAACGCUGCCAUGAAUUGGGCUUGGUCUGUCUGAAGGGAGCCACCUUUUCGACAAUCCUUAGm6ACUUCUUUUGCCUGUUGGAAUUACACCUUGGAUCGUGGCGAAGUCUAUAGAGGUCAGAUUAAGAAGAACCAAAGCAGAAUAAACGUAGAACCCGAUGCUGAGUUCACGAGUGAGGACGACCUCUUCCUAUAUGCUUUGCUAUACCCUGCGUUUUGAm6ACAUUAAGGACGAGAUAGGAGGCCCAUAAUGUUUCUUCUUGCUUUAAUCCUGUCGUGGCAACGUUGACUUCCAGGUCUCAGUUUGUUGUCCAGGCCAGAGUGCAGUGGCGCAAUCUCGGCUCACUGCAGCCUCAACAUCCUAGGCUCAAGCCAUCCUCCCACCUCACCCUCCCGAGUAGCUGGAAGUACAGGCUCGUCUUGAACUCUGGGCUGAAGUCAUCCACCUGCCUCGGCCUCCCAAAGUGCUAGGAUUACAGGCCUUAGCCACCUCACCUAGUCCUCUGAAAUUUCUAAAUAAGCCAGUGCUGAAGGAUCUAGCCCAACUUCUACCAAACUUUGUUACCUUUUCCCCUUCAGUGGUAGGAAUAGACAUGAUUUAUUUAGCAAGGGUGAGUGCUUUUGUUGAAUUUUAGUUUGGGGUUUAUUAUUACACAAACUAAAGACAGCGGGGCAAUUUGGAAAGAUAACUAGGCAGCUGCAUGACUUCAGGCAGGUGUCCUAACACUGUACUCUUAAAGUGAGGGGAGUGAACUGGAAGAUAUCCUGUGUCCUCAUAGUUUGAACAUUCUGUGGUUCGCUCAUCAAUAUGACUACACUGUAUAGUCAUAGCACACAUUUGAGGUCUUGAAGAAGAGAGAUGAGGCUUGUUCUAAAAAGCAUCCAGAGUAGGUCUUGAAAAAGGAUUUCUGUUUAAGUAAAGACCUAAAACAAUGCUCAGAUUCCUAUUAUACAUAGGAUCCAUGAACUGGAAAAGAUAUGGAUGAGUCUGAGUAAAUUAUCUAGGUUUUGUUUUAGACAAAACCAUUCCACUGUCAAGCAGCAGAGAGCAAGGGAGUGGGGAUGGAGGUAUAUUGUGUUUUUUUAAAGGCCAUAAGAAAAUAAUUGUCUUGAUAAAAUUUUAACUUAGGACUGGGUAUGGUGGCUCGUGCCUGAAAUCUCAGCAGUUUGGGAGGCUGAGGCAGGAGGAUCACUUGAGCCCAGGAAGGAGACCAGCCUGAGCAACAUGGCGAGACCCCUAUCUCUACAAAAAAUGUUAAAAUUUGCCAGGCAUGGUGGUGCAAGCCUGUAGUCCCAGCUGUUUGAGAGGCUGAGGCAGGAAGAUUGCUUGAACCUAGGAGGUCAAGGCUGUAGUGAACAGUGUUUGCUAUACCACAUUCCAAUCUGGUGACAAAGCAAGACCCUGUCUCAAAAAAAAGAAUUUUUUUUAACUUGAGGGAAAAAAAGUUUUACAAACUGUAGACACACAGCAAAACAGAAACAGGAAAAAAAGUACUAAAAAGAGAAAAAUGUCAGUAGUGGGUCUCUAAGUAGUCGGAUUAUGAGUAAUUGGCCUGGUUGCAGAGUGAGCCCAUGGGm6ACAGCCCUCUGAAAUUAUACUGCUUACAACCAUGCUGAGUCUGCAAGGm6ACUUCGUCCAAGCCUUUCCGUCCAGGACCUCAA
Sequence (MODOMICS CODE ENCODING)	AAACUAAAAGGCUGGAAGGGAGGCAGCUGCCUUUGUUUGCCAUGGAUGGGUAGGGGCUGCACUGAGCAGCACCGGUGUUCUUCAUCCGGCUGCACCCCCAACAGAGCUCUUUCUUCCCCAGAUCCCUUUUACAGUUGGAUUCUCCCUCUUGGAUCUGGCUCUGCCUUAGUCCGACCUAGAGGGAUCAGCUUCGCCCACGCCCACUCUCACCCGGAACCUUUCAUCUCUUAUUGAAGCCUUUUAGGCCCAUUGGGAUGUUCAUUAGA2000000006ACUCUGAAAACUACAGUUCUCCCCUUUAUGAGG2000000006ACUGCACCACAGCUCGCCCUCUCCUGGGUUCCGGUAAGAAGAGAUUCCAAUACCACUCUUUUUUCAGAAUUCAGAAAGGCAAGAGACCACCUUACUGAGCUUCAA2000000006ACUGGGGCUGGGAACGCUGCCAUGAAUUGGGCUUGGUCUGUCUGAAGGGAGCCACCUUUUCGACAAUCCUUAG2000000006ACUUCUUUUGCCUGUUGGAAUUACACCUUGGAUCGUGGCGAAGUCUAUAGAGGUCAGAUUAAGAAGAACCAAAGCAGAAUAAACGUAGAACCCGAUGCUGAGUUCACGAGUGAGGACGACCUCUUCCUAUAUGCUUUGCUAUACCCUGCGUUUUGA2000000006ACAUUAAGGACGAGAUAGGAGGCCCAUAAUGUUUCUUCUUGCUUUAAUCCUGUCGUGGCAACGUUGACUUCCAGGUCUCAGUUUGUUGUCCAGGCCAGAGUGCAGUGGCGCAAUCUCGGCUCACUGCAGCCUCAACAUCCUAGGCUCAAGCCAUCCUCCCACCUCACCCUCCCGAGUAGCUGGAAGUACAGGCUCGUCUUGAACUCUGGGCUGAAGUCAUCCACCUGCCUCGGCCUCCCAAAGUGCUAGGAUUACAGGCCUUAGCCACCUCACCUAGUCCUCUGAAAUUUCUAAAUAAGCCAGUGCUGAAGGAUCUAGCCCAACUUCUACCAAACUUUGUUACCUUUUCCCCUUCAGUGGUAGGAAUAGACAUGAUUUAUUUAGCAAGGGUGAGUGCUUUUGUUGAAUUUUAGUUUGGGGUUUAUUAUUACACAAACUAAAGACAGCGGGGCAAUUUGGAAAGAUAACUAGGCAGCUGCAUGACUUCAGGCAGGUGUCCUAACACUGUACUCUUAAAGUGAGGGGAGUGAACUGGAAGAUAUCCUGUGUCCUCAUAGUUUGAACAUUCUGUGGUUCGCUCAUCAAUAUGACUACACUGUAUAGUCAUAGCACACAUUUGAGGUCUUGAAGAAGAGAGAUGAGGCUUGUUCUAAAAAGCAUCCAGAGUAGGUCUUGAAAAAGGAUUUCUGUUUAAGUAAAGACCUAAAACAAUGCUCAGAUUCCUAUUAUACAUAGGAUCCAUGAACUGGAAAAGAUAUGGAUGAGUCUGAGUAAAUUAUCUAGGUUUUGUUUUAGACAAAACCAUUCCACUGUCAAGCAGCAGAGAGCAAGGGAGUGGGGAUGGAGGUAUAUUGUGUUUUUUUAAAGGCCAUAAGAAAAUAAUUGUCUUGAUAAAAUUUUAACUUAGGACUGGGUAUGGUGGCUCGUGCCUGAAAUCUCAGCAGUUUGGGAGGCUGAGGCAGGAGGAUCACUUGAGCCCAGGAAGGAGACCAGCCUGAGCAACAUGGCGAGACCCCUAUCUCUACAAAAAAUGUUAAAAUUUGCCAGGCAUGGUGGUGCAAGCCUGUAGUCCCAGCUGUUUGAGAGGCUGAGGCAGGAAGAUUGCUUGAACCUAGGAGGUCAAGGCUGUAGUGAACAGUGUUUGCUAUACCACAUUCCAAUCUGGUGACAAAGCAAGACCCUGUCUCAAAAAAAAGAAUUUUUUUUAACUUGAGGGAAAAAAAGUUUUACAAACUGUAGACACACAGCAAAACAGAAACAGGAAAAAAAGUACUAAAAAGAGAAAAAUGUCAGUAGUGGGUCUCUAAGUAGUCGGAUUAUGAGUAAUUGGCCUGGUUGCAGAGUGAGCCCAUGGG2000000006ACAGCCCUCUGAAAUUAUACUGCUUACAACCAUGCUGAGUCUGCAAGG2000000006ACUUCGUCCAAGCCUUUCCGUCCAGGACCUCAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	267	300	405	478	634	1989	2037
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	14:70810226:+	14:70810259:+	14:70810364:+	14:70810437:+	14:70810593:+	14:70815136:+	14:70815184:+
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	aHkqKEJkRYyb msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9 Yfn77uLS5tv8	gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL nfCHyrYzE6fB Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL	4HMi5ykupT9V 5aTkEfEpX8Xm aHkqKEJkRYyb msuJfBpJvM5H VyCX26p5UBRL	msuJfBpJvM5H VyCX26p5UBRL	gBgcfFQ5WN9C jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9 bXBqJigD9oV3 Yfn77uLS5tv8	6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 bXBqJigD9oV3 JkWoGWVwjNda Yfn77uLS5tv8