General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000556162
Gene ID:	ENSG00000129515
Gene Name:	SNX6
Sequence (UNICHARACTER ENCODING)	AGGGAGAUGCGCGCCUGCGCCGGCCCUCGCCUCGGAGCAGCCAUGAUGGCCUGGACGACGGCCCGGACUUCCUCUCAGAAGAGGACCGCGGACUUAAAGCAAUAAAUGUAGAUCUUCAAAGUGAUGCUGCUCUGCAGGUGGACAUUUCUGAUGCUCUUAGUGAGCGGGAUAAAGUAAAAUUCACUGUUCACACAAAGAGUUCAUUGCCAAAUUUUAAACAAAACGAGUUUUCAGUUGUUCGGCAACAUGAGGAAUUUAUCUGGCUUCAUGAUUCCUUUGUUGAAAAUGAAGACUAUGCAGGUUAUAUCAUUCCACCAGCACCACCAAGЖCCUGAUUUUGAUGCUUCAAGGGAAAAACUACЖGAAGCUUGGUGAAGGAGAAGGGUCAAUGACGAAGGAAGAAUUCACAAAGAUGAAACAGGAACUGGAAGCGGGUUGGAUAACAGAGAACCUUGGGUUUAUUCUACUGCUACCUCCAUCCUCUGCAUCCUUCUUUUUUGUCUUCACUGAAUGACUACCCUCACAGAGAUCAAACUUCUCCCAUCAUUGGUCCUGCUGGUUUGCUGUGAAUAUUUGGCAAUAUUCAAGAAGЖCAGUUGCGAUGCAUGAAGUGUUCCUGUGUCGUGUGGCAGCACAPCCUAUUUUGAGAAGAGAUUUAAAUUUCCAUGUCUUCUUGGAAUAUAAUCAAGAUUUGAGUGUGCGAGGAAAAAAUAAAAAAGAGAAACUUGAAGACUUCUPUAAAAACAUGGUUAAAUCAGCAGAUGGAGUAAUCGUUUCAGGAGUAAAGGAUGUAGAUGAUUUCUUUGAGCACGAACGAACAUUUCUUUUGGAGUAUCAUAACCGAGUUAAGGAUGCAUCUGCUAAAUCUGAUAGAAUGACAAGAUCCCACAAAAGUGCUGCAGAUGAUUACAAUAGAAUUGGUUCUUCAUUAUAUGCUPUAGGAACUCAGGAUUCUACAGAUAUAUGCAAGUUUUUUCUCAAAGUUUCAGAACUGUUCGAUAAAACAAGAAAAAUAGAAGCACGAGUGUCUGCUGAUGAAGACCUCAAACUUUCUGAUCUUUUAAAAUAUUACUUAAGAGAAUCUCAAGCUGCUAAGGAUCUCCUGUAUCGAAGGUCUAGGUCACUAGUGGAUUAUGAAAAUGCUAAUAAAGCACUGGAUAAAGCAAGAGCAAAAAAUAAAGAUGUUCUACAGGCCGAAACUUCCCAACAAUUAUGUUGUCAGAAAUUUGAAAAAAUAUCUGAGUCUGCAAAACAAGAACUUAUAGAUUUUAAGACAAGAAGAGUUGCUGCAUUCAGAAAAAAUUUAGUGGAACUGGCAGAGUUAGAACUGAAGCAUGCAAAGG#UAAUCUACAGUUGCUGCAGAACUGCCUGGCAGUGUUAAAUGGAGACACAPAAGCCACACUCCGCCUUCCUGUUAAAAAGGGCUGCCUUCCUUCAAAUUUUAUUUUUGUUUUCUUAAUGAUGUUAAGCAUUUAUGCUCACUGGAAACAAACAAAAAGCAGCUGAAAAAGUGCAUCAACUCCUCUUUUUCUGAGAAACAUGGAGCAGCGCACGCCCAGGCGAUGCCAGUCUGUGUGCCGUGAUGCCGCACUGUGUUCCCCAUGACAGUGGUCCAUCAUCGUGCACUC#UCAUACUCAGAAGUCCAAAGUUCAUUCUUCUPUAAAGUAGCCUCUAUAЖCUCUGUUUAUUUUAUAAAUAGUAUUCCUUAUGGCUGCCACUCUUAUUUACCUPUAAAUAAUUUCUGAAAUUUAACCUUUUCAGAAUGCAUUGUUGAAACAAGAUAAAGAUUGCCUUUUUUGAAUUUUUUAAAUUUUGUUUUUAAAAGCAUAUACCACCUUAGUUCAUUCAUGUAUCCUG
Sequence (SHORT NAMES ENCODING)	AGGGAGAUGCGCGCCUGCGCCGGCCCUCGCCUCGGAGCAGCCAUGAUGGCCUGGACGACGGCCCGGACUUCCUCUCAGAAGAGGACCGCGGACUUAAAGCAAUAAAUGUAGAUCUUCAAAGUGAUGCUGCUCUGCAGGUGGACAUUUCUGAUGCUCUUAGUGAGCGGGAUAAAGUAAAAUUCACUGUUCACACAAAGAGUUCAUUGCCAAAUUUUAAACAAAACGAGUUUUCAGUUGUUCGGCAACAUGAGGAAUUUAUCUGGCUUCAUGAUUCCUUUGUUGAAAAUGAAGACUAUGCAGGUUAUAUCAUUCCACCAGCACCACCAAGm6ACCUGAUUUUGAUGCUUCAAGGGAAAAACUACm6AGAAGCUUGGUGAAGGAGAAGGGUCAAUGACGAAGGAAGAAUUCACAAAGAUGAAACAGGAACUGGAAGCGGGUUGGAUAACAGAGAACCUUGGGUUUAUUCUACUGCUACCUCCAUCCUCUGCAUCCUUCUUUUUUGUCUUCACUGAAUGACUACCCUCACAGAGAUCAAACUUCUCCCAUCAUUGGUCCUGCUGGUUUGCUGUGAAUAUUUGGCAAUAUUCAAGAAGm6ACAGUUGCGAUGCAUGAAGUGUUCCUGUGUCGUGUGGCAGCACAYCCUAUUUUGAGAAGAGAUUUAAAUUUCCAUGUCUUCUUGGAAUAUAAUCAAGAUUUGAGUGUGCGAGGAAAAAAUAAAAAAGAGAAACUUGAAGACUUCUYUAAAAACAUGGUUAAAUCAGCAGAUGGAGUAAUCGUUUCAGGAGUAAAGGAUGUAGAUGAUUUCUUUGAGCACGAACGAACAUUUCUUUUGGAGUAUCAUAACCGAGUUAAGGAUGCAUCUGCUAAAUCUGAUAGAAUGACAAGAUCCCACAAAAGUGCUGCAGAUGAUUACAAUAGAAUUGGUUCUUCAUUAUAUGCUYUAGGAACUCAGGAUUCUACAGAUAUAUGCAAGUUUUUUCUCAAAGUUUCAGAACUGUUCGAUAAAACAAGAAAAAUAGAAGCACGAGUGUCUGCUGAUGAAGACCUCAAACUUUCUGAUCUUUUAAAAUAUUACUUAAGAGAAUCUCAAGCUGCUAAGGAUCUCCUGUAUCGAAGGUCUAGGUCACUAGUGGAUUAUGAAAAUGCUAAUAAAGCACUGGAUAAAGCAAGAGCAAAAAAUAAAGAUGUUCUACAGGCCGAAACUUCCCAACAAUUAUGUUGUCAGAAAUUUGAAAAAAUAUCUGAGUCUGCAAAACAAGAACUUAUAGAUUUUAAGACAAGAAGAGUUGCUGCAUUCAGAAAAAAUUUAGUGGAACUGGCAGAGUUAGAACUGAAGCAUGCAAAGGGmUAAUCUACAGUUGCUGCAGAACUGCCUGGCAGUGUUAAAUGGAGACACAYAAGCCACACUCCGCCUUCCUGUUAAAAAGGGCUGCCUUCCUUCAAAUUUUAUUUUUGUUUUCUUAAUGAUGUUAAGCAUUUAUGCUCACUGGAAACAAACAAAAAGCAGCUGAAAAAGUGCAUCAACUCCUCUUUUUCUGAGAAACAUGGAGCAGCGCACGCCCAGGCGAUGCCAGUCUGUGUGCCGUGAUGCCGCACUGUGUUCCCCAUGACAGUGGUCCAUCAUCGUGCACUCGmUCAUACUCAGAAGUCCAAAGUUCAUUCUUCUYUAAAGUAGCCUCUAUAm6ACUCUGUUUAUUUUAUAAAUAGUAUUCCUUAUGGCUGCCACUCUUAUUUACCUYUAAAUAAUUUCUGAAAUUUAACCUUUUCAGAAUGCAUUGUUGAAACAAGAUAAAGAUUGCCUUUUUUGAAUUUUUUAAAUUUUGUUUUUAAAAGCAUAUACCACCUUAGUUCAUUCAUGUAUCCUG
Sequence (MODOMICS CODE ENCODING)	AGGGAGAUGCGCGCCUGCGCCGGCCCUCGCCUCGGAGCAGCCAUGAUGGCCUGGACGACGGCCCGGACUUCCUCUCAGAAGAGGACCGCGGACUUAAAGCAAUAAAUGUAGAUCUUCAAAGUGAUGCUGCUCUGCAGGUGGACAUUUCUGAUGCUCUUAGUGAGCGGGAUAAAGUAAAAUUCACUGUUCACACAAAGAGUUCAUUGCCAAAUUUUAAACAAAACGAGUUUUCAGUUGUUCGGCAACAUGAGGAAUUUAUCUGGCUUCAUGAUUCCUUUGUUGAAAAUGAAGACUAUGCAGGUUAUAUCAUUCCACCAGCACCACCAAG2000000006ACCUGAUUUUGAUGCUUCAAGGGAAAAACUAC2000000006AGAAGCUUGGUGAAGGAGAAGGGUCAAUGACGAAGGAAGAAUUCACAAAGAUGAAACAGGAACUGGAAGCGGGUUGGAUAACAGAGAACCUUGGGUUUAUUCUACUGCUACCUCCAUCCUCUGCAUCCUUCUUUUUUGUCUUCACUGAAUGACUACCCUCACAGAGAUCAAACUUCUCCCAUCAUUGGUCCUGCUGGUUUGCUGUGAAUAUUUGGCAAUAUUCAAGAAG2000000006ACAGUUGCGAUGCAUGAAGUGUUCCUGUGUCGUGUGGCAGCACA2000000009UCCUAUUUUGAGAAGAGAUUUAAAUUUCCAUGUCUUCUUGGAAUAUAAUCAAGAUUUGAGUGUGCGAGGAAAAAAUAAAAAAGAGAAACUUGAAGACUUCU2000000009UUAAAAACAUGGUUAAAUCAGCAGAUGGAGUAAUCGUUUCAGGAGUAAAGGAUGUAGAUGAUUUCUUUGAGCACGAACGAACAUUUCUUUUGGAGUAUCAUAACCGAGUUAAGGAUGCAUCUGCUAAAUCUGAUAGAAUGACAAGAUCCCACAAAAGUGCUGCAGAUGAUUACAAUAGAAUUGGUUCUUCAUUAUAUGCU2000000009UUAGGAACUCAGGAUUCUACAGAUAUAUGCAAGUUUUUUCUCAAAGUUUCAGAACUGUUCGAUAAAACAAGAAAAAUAGAAGCACGAGUGUCUGCUGAUGAAGACCUCAAACUUUCUGAUCUUUUAAAAUAUUACUUAAGAGAAUCUCAAGCUGCUAAGGAUCUCCUGUAUCGAAGGUCUAGGUCACUAGUGGAUUAUGAAAAUGCUAAUAAAGCACUGGAUAAAGCAAGAGCAAAAAAUAAAGAUGUUCUACAGGCCGAAACUUCCCAACAAUUAUGUUGUCAGAAAUUUGAAAAAAUAUCUGAGUCUGCAAAACAAGAACUUAUAGAUUUUAAGACAAGAAGAGUUGCUGCAUUCAGAAAAAAUUUAGUGGAACUGGCAGAGUUAGAACUGAAGCAUGCAAAGG2000000090GUAAUCUACAGUUGCUGCAGAACUGCCUGGCAGUGUUAAAUGGAGACACA2000000009UAAGCCACACUCCGCCUUCCUGUUAAAAAGGGCUGCCUUCCUUCAAAUUUUAUUUUUGUUUUCUUAAUGAUGUUAAGCAUUUAUGCUCACUGGAAACAAACAAAAAGCAGCUGAAAAAGUGCAUCAACUCCUCUUUUUCUGAGAAACAUGGAGCAGCGCACGCCCAGGCGAUGCCAGUCUGUGUGCCGUGAUGCCGCACUGUGUUCCCCAUGACAGUGGUCCAUCAUCGUGCACUC2000000090GUCAUACUCAGAAGUCCAAAGUUCAUUCUUCU2000000009UUAAAGUAGCCUCUAUA2000000006ACUCUGUUUAUUUUAUAAAUAGUAUUCCUUAUGGCUGCCACUCUUAUUUACCU2000000009UUAAAUAAUUUCUGAAAUUUAACCUUUUCAGAAUGCAUUGUUGAAACAAGAUAAAGAUUGCCUUUUUUGAAUUUUUUAAAUUUUGUUUUUAAAAGCAUAUACCACCUUAGUUCAUUCAUGUAUCCUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	329	361	590	634	735	935	1341	1391	1627	1659	1676	1729
Modification Positions	m6A	m6A	m6A	Y	Y	Y	Gm	Y	Gm	Y	m6A	Y
Genomic Coordinates	14:34605697:-	14:34605665:-	14:34603446:-	14:34603402:-	14:34597599:-	14:34586261:-	14:34563174:-	14:34563124:-	14:34562888:-	14:34562856:-	14:34562839:-	14:34562786:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	ArijeGVTwYBw nfCHyrYzE6fB BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	8cMbzB4aD5Se KTLz8piFYdwC BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	jaSvBXBkn3xs YkSG92k4EHDM	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	jaSvBXBkn3xs YkSG92k4EHDM	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	KjeH7Nsffuas LZJKems7W2wi XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8