General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000555709
Gene ID:	ENSG00000100714
Gene Name:	MTHFD1
Sequence (UNICHARACTER ENCODING)	ЖGUGUGAUCCCCUGGCCAGUCCCUAAGCACGUGGGUUGGGUUGUCCUGCUUGGCUGCGGAGGGAGUGGAACCUCGAUAUUGGUGGUGUCCAUCGUGGGCAGCGGACUAAUAAAGGCCAUGGCGCCAGCAGAAAUCCUGAACGGGAAGGAGAUCUCCGCGCAAAUAAGGGCGAGACUGAAAAAUCAAGUCACUCAGUUGAAGGAGCAAGUACCUGGUUUCACACCACGCCUGGCAAUAUUACAGGUUGGCAACAGAGAUGAUUCCAAUCUPUAUAUAAAUGUGAAGCUGAAGGCUGCUGAAGAGAUUGGGAUCAAAGCCACUCACAUUAAGUUACCAAGAACAACCACAGAAUCUGAGGUGAUGAAGUACЖUUACAUCUUUGAAUGAAGACUCUACUGUACAUGGGUUCUUAGUGCAGCUACCUPUAGAUUCAGAGAAUUCCAUUAЖCACUGAAGAAGUGAUCAAUGCUAUUGCACCCGAGAAGGAUGUGGAUGGAUUGACUAGCAUCAAUGCUGGGAAЖCUUGCUAGAGGUGACCUCAAUGACUGUUUCAUUCCUUGUACGCCUAAGGGAUGCUUGGAACUCAUCAAAGAGЖCAGGUAAAUAAAGGUGACAPCCUGGUGGUUGCAACUGGUCAGCCUGAAAUGGUUAAAGGGGAGUGGAUCAAACCUGGGGCAAUAGUCAUCGACUGUGGAAUCAAUUAUGUCCCAGAUGAUAAAAAACCAAAUGGGAGAAAAGUUGUGGGUGAUGUGGCAUACGACGAGGCCAAAGAGAGGGCGAGCUUCAUCACUCCUGUUCCUGGCGGCGUAGGGCCCAUGACAGUUGCAAUGCUCAUGCAGAGCACAGUAGAGAGUGCCAAGCGUUUCCUGGAGAAAUUUAAGCCAGGAAAGUGGAUGAUUCAGUAUAЖCAACCUUAACCUCAAGACACCUGUUCCAAGUGACAUUGAUAUAUCACGAUCUUGUAAЖCCGAAGCCCAUUGGUAAGCUGGCUCGAGAAAUUGGUCUGCUGUCUGAAGAGGUAGAAUUAUAUGGUGAAACAAAGGCCAAAGUUCUGCUGUCAGCACUAGAACGCCUGAAGCACCGGCCUGAUGGGAAAUACGUGGUGGUGACUGGAAUAЖCUCCAACACCCCUGGGAGAAGGGAAAAGCACAACUACЖAUCGGGCUAGUGCAAGCCCUUGGUGCCCAUCUCUACCAGAAUGUCUUUGCGUGUGUGCGACAGCCUUCUCAGGGCCCCACCUUUGGAAUAAAAGGUGGCGCUGCAGGAGGCGGCUACUCCCAGGUCAUUCCUAUGGAAGAGUUUAAUCUCCACCUCACAGGUGACAPCCAUGCCAUCACUGCAGCUAAUAACCUCGUUGCUGCGGCCAUUGAUGCUCGGAUAUUUCAUGAACUGACCCAGЖCAGACAAGGCUCUCUPUAAUCGUUUGGUGCCAUCAGUAAAUGGAGUGAGAAGGUUCUCUGACAPCCAAAUCCGAAGGUUAAAGAGACUAGGCAUUGAAAAGACUGACCCUACCACACUGACAGAUGAAGAGAUAAACAGAUPUGCAAGAUUGGACAUUGAUCCAGAAACCAUAЖCUUGGCAAAGAGUGUUGGAUACCAAUGAUAGAUUCCUGAGGAAGAUCACGAUUGGACAGGCUCCAACGGAGAAGGGUCACACʍCGGACGGUAACAAUUUGUCCCUUUCCAAGGAAAUUAGUUCAGAGGCACUAGAUCUUGCUGCUUCUCUCCUCCUCCAUCCUCUCUCAUACGACUGAUACUGCCAGGUGUUGUUCUGCCUUCUCCCUUUUAAAAUGGAAGUGAGUAGGUGUGUGGCAUUGAGCACUCCUGACAGCUUUUGCAAUAAAUCCCAUGUGUCACCUGUGUGUUUUUCCCCCGGCAUUUUUUCCUGGAGGUGGAGAGCCCCAAGUGAAUAUCCUUGCAUAGAAAUUGAUUAAAAUUGCUUCUUUUUUGUGGCCAUUUCACUGUAUAUCUCCUUGGUUUAAGAGGUACCAUAUUAUUCCCUUGUAUAUGAAAGAAACAAUAAGCGCAUGAUUAUAAGCGGCCUUCAUAGGGAUAAAAUCAUAGCUUUUUGGUC
Sequence (SHORT NAMES ENCODING)	m6AGUGUGAUCCCCUGGCCAGUCCCUAAGCACGUGGGUUGGGUUGUCCUGCUUGGCUGCGGAGGGAGUGGAACCUCGAUAUUGGUGGUGUCCAUCGUGGGCAGCGGACUAAUAAAGGCCAUGGCGCCAGCAGAAAUCCUGAACGGGAAGGAGAUCUCCGCGCAAAUAAGGGCGAGACUGAAAAAUCAAGUCACUCAGUUGAAGGAGCAAGUACCUGGUUUCACACCACGCCUGGCAAUAUUACAGGUUGGCAACAGAGAUGAUUCCAAUCUYUAUAUAAAUGUGAAGCUGAAGGCUGCUGAAGAGAUUGGGAUCAAAGCCACUCACAUUAAGUUACCAAGAACAACCACAGAAUCUGAGGUGAUGAAGUACm6AUUACAUCUUUGAAUGAAGACUCUACUGUACAUGGGUUCUUAGUGCAGCUACCUYUAGAUUCAGAGAAUUCCAUUAm6ACACUGAAGAAGUGAUCAAUGCUAUUGCACCCGAGAAGGAUGUGGAUGGAUUGACUAGCAUCAAUGCUGGGAAm6ACUUGCUAGAGGUGACCUCAAUGACUGUUUCAUUCCUUGUACGCCUAAGGGAUGCUUGGAACUCAUCAAAGAGm6ACAGGUAAAUAAAGGUGACAYCCUGGUGGUUGCAACUGGUCAGCCUGAAAUGGUUAAAGGGGAGUGGAUCAAACCUGGGGCAAUAGUCAUCGACUGUGGAAUCAAUUAUGUCCCAGAUGAUAAAAAACCAAAUGGGAGAAAAGUUGUGGGUGAUGUGGCAUACGACGAGGCCAAAGAGAGGGCGAGCUUCAUCACUCCUGUUCCUGGCGGCGUAGGGCCCAUGACAGUUGCAAUGCUCAUGCAGAGCACAGUAGAGAGUGCCAAGCGUUUCCUGGAGAAAUUUAAGCCAGGAAAGUGGAUGAUUCAGUAUAm6ACAACCUUAACCUCAAGACACCUGUUCCAAGUGACAUUGAUAUAUCACGAUCUUGUAAm6ACCGAAGCCCAUUGGUAAGCUGGCUCGAGAAAUUGGUCUGCUGUCUGAAGAGGUAGAAUUAUAUGGUGAAACAAAGGCCAAAGUUCUGCUGUCAGCACUAGAACGCCUGAAGCACCGGCCUGAUGGGAAAUACGUGGUGGUGACUGGAAUAm6ACUCCAACACCCCUGGGAGAAGGGAAAAGCACAACUACm6AAUCGGGCUAGUGCAAGCCCUUGGUGCCCAUCUCUACCAGAAUGUCUUUGCGUGUGUGCGACAGCCUUCUCAGGGCCCCACCUUUGGAAUAAAAGGUGGCGCUGCAGGAGGCGGCUACUCCCAGGUCAUUCCUAUGGAAGAGUUUAAUCUCCACCUCACAGGUGACAYCCAUGCCAUCACUGCAGCUAAUAACCUCGUUGCUGCGGCCAUUGAUGCUCGGAUAUUUCAUGAACUGACCCAGm6ACAGACAAGGCUCUCUYUAAUCGUUUGGUGCCAUCAGUAAAUGGAGUGAGAAGGUUCUCUGACAYCCAAAUCCGAAGGUUAAAGAGACUAGGCAUUGAAAAGACUGACCCUACCACACUGACAGAUGAAGAGAUAAACAGAUYUGCAAGAUUGGACAUUGAUCCAGAAACCAUAm6ACUUGGCAAAGAGUGUUGGAUACCAAUGAUAGAUUCCUGAGGAAGAUCACGAUUGGACAGGCUCCAACGGAGAAGGGUCACACAmCGGACGGUAACAAUUUGUCCCUUUCCAAGGAAAUUAGUUCAGAGGCACUAGAUCUUGCUGCUUCUCUCCUCCUCCAUCCUCUCUCAUACGACUGAUACUGCCAGGUGUUGUUCUGCCUUCUCCCUUUUAAAAUGGAAGUGAGUAGGUGUGUGGCAUUGAGCACUCCUGACAGCUUUUGCAAUAAAUCCCAUGUGUCACCUGUGUGUUUUUCCCCCGGCAUUUUUUCCUGGAGGUGGAGAGCCCCAAGUGAAUAUCCUUGCAUAGAAAUUGAUUAAAAUUGCUUCUUUUUUGUGGCCAUUUCACUGUAUAUCUCCUUGGUUUAAGAGGUACCAUAUUAUUCCCUUGUAUAUGAAAGAAACAAUAAGCGCAUGAUUAUAAGCGGCCUUCAUAGGGAUAAAAUCAUAGCUUUUUGGUC
Sequence (MODOMICS CODE ENCODING)	2000000006AGUGUGAUCCCCUGGCCAGUCCCUAAGCACGUGGGUUGGGUUGUCCUGCUUGGCUGCGGAGGGAGUGGAACCUCGAUAUUGGUGGUGUCCAUCGUGGGCAGCGGACUAAUAAAGGCCAUGGCGCCAGCAGAAAUCCUGAACGGGAAGGAGAUCUCCGCGCAAAUAAGGGCGAGACUGAAAAAUCAAGUCACUCAGUUGAAGGAGCAAGUACCUGGUUUCACACCACGCCUGGCAAUAUUACAGGUUGGCAACAGAGAUGAUUCCAAUCU2000000009UUAUAUAAAUGUGAAGCUGAAGGCUGCUGAAGAGAUUGGGAUCAAAGCCACUCACAUUAAGUUACCAAGAACAACCACAGAAUCUGAGGUGAUGAAGUAC2000000006AUUACAUCUUUGAAUGAAGACUCUACUGUACAUGGGUUCUUAGUGCAGCUACCU2000000009UUAGAUUCAGAGAAUUCCAUUA2000000006ACACUGAAGAAGUGAUCAAUGCUAUUGCACCCGAGAAGGAUGUGGAUGGAUUGACUAGCAUCAAUGCUGGGAA2000000006ACUUGCUAGAGGUGACCUCAAUGACUGUUUCAUUCCUUGUACGCCUAAGGGAUGCUUGGAACUCAUCAAAGAG2000000006ACAGGUAAAUAAAGGUGACA2000000009UCCUGGUGGUUGCAACUGGUCAGCCUGAAAUGGUUAAAGGGGAGUGGAUCAAACCUGGGGCAAUAGUCAUCGACUGUGGAAUCAAUUAUGUCCCAGAUGAUAAAAAACCAAAUGGGAGAAAAGUUGUGGGUGAUGUGGCAUACGACGAGGCCAAAGAGAGGGCGAGCUUCAUCACUCCUGUUCCUGGCGGCGUAGGGCCCAUGACAGUUGCAAUGCUCAUGCAGAGCACAGUAGAGAGUGCCAAGCGUUUCCUGGAGAAAUUUAAGCCAGGAAAGUGGAUGAUUCAGUAUA2000000006ACAACCUUAACCUCAAGACACCUGUUCCAAGUGACAUUGAUAUAUCACGAUCUUGUAA2000000006ACCGAAGCCCAUUGGUAAGCUGGCUCGAGAAAUUGGUCUGCUGUCUGAAGAGGUAGAAUUAUAUGGUGAAACAAAGGCCAAAGUUCUGCUGUCAGCACUAGAACGCCUGAAGCACCGGCCUGAUGGGAAAUACGUGGUGGUGACUGGAAUA2000000006ACUCCAACACCCCUGGGAGAAGGGAAAAGCACAACUAC2000000006AAUCGGGCUAGUGCAAGCCCUUGGUGCCCAUCUCUACCAGAAUGUCUUUGCGUGUGUGCGACAGCCUUCUCAGGGCCCCACCUUUGGAAUAAAAGGUGGCGCUGCAGGAGGCGGCUACUCCCAGGUCAUUCCUAUGGAAGAGUUUAAUCUCCACCUCACAGGUGACA2000000009UCCAUGCCAUCACUGCAGCUAAUAACCUCGUUGCUGCGGCCAUUGAUGCUCGGAUAUUUCAUGAACUGACCCAG2000000006ACAGACAAGGCUCUCU2000000009UUAAUCGUUUGGUGCCAUCAGUAAAUGGAGUGAGAAGGUUCUCUGACA2000000009UCCAAAUCCGAAGGUUAAAGAGACUAGGCAUUGAAAAGACUGACCCUACCACACUGACAGAUGAAGAGAUAAACAGAU2000000009UUGCAAGAUUGGACAUUGAUCCAGAAACCAUA2000000006ACUUGGCAAAGAGUGUUGGAUACCAAUGAUAGAUUCCUGAGGAAGAUCACGAUUGGACAGGCUCCAACGGAGAAGGGUCACAC2000000090ACGGACGGUAACAAUUUGUCCCUUUCCAAGGAAAUUAGUUCAGAGGCACUAGAUCUUGCUGCUUCUCUCCUCCUCCAUCCUCUCUCAUACGACUGAUACUGCCAGGUGUUGUUCUGCCUUCUCCCUUUUAAAAUGGAAGUGAGUAGGUGUGUGGCAUUGAGCACUCCUGACAGCUUUUGCAAUAAAUCCCAUGUGUCACCUGUGUGUUUUUCCCCCGGCAUUUUUUCCUGGAGGUGGAGAGCCCCAAGUGAAUAUCCUUGCAUAGAAAUUGAUUAAAAUUGCUUCUUUUUUGUGGCCAUUUCACUGUAUAUCUCCUUGGUUUAAGAGGUACCAUAUUAUUCCCUUGUAUAUGAAAGAAACAAUAAGCGCAUGAUUAUAAGCGGCCUUCAUAGGGAUAAAAUCAUAGCUUUUUGGUC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1	270	370	424	446	519	592	612	903	961	1112	1150	1317	1391	1407	1455	1533	1565	1648
Modification Positions	m6A	Y	m6A	Y	m6A	m6A	m6A	Y	m6A	m6A	m6A	m6A	Y	m6A	Y	Y	Y	m6A	Am
Genomic Coordinates	14:64388311:+	14:64411116:+	14:64415370:+	14:64415424:+	14:64415446:+	14:64415663:+	14:64415736:+	14:64419830:+	14:64425797:+	14:64426046:+	14:64427341:+	14:64427379:+	14:64431557:+	14:64431631:+	14:64431794:+	14:64431842:+	14:64435627:+	14:64435659:+	14:64439166:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	5FhTyQVy2tKW 5Nnepx5V7yHo 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	ArijeGVTwYBw BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	8cMbzB4aD5Se ArijeGVTwYBw BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	8cMbzB4aD5Se 93arJtwJmuS9 ArijeGVTwYBw KTLz8piFYdwC BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	jaSvBXBkn3xs YkSG92k4EHDM