General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000558566
Gene ID:	ENSG00000092330
Gene Name:	TINF2
Sequence (UNICHARACTER ENCODING)	CGGGCUCGAGACAGCGGCGACGUUUAAAGCUGAGCGACCCAGUGCCACUGGAGACGGUCAGCUUCUCCACUCAGGCUCCUCCAGCCCGAGCCAGAAGACCCCCUCCCCCAGAAUUCUGGGGGCCGAUGGAAGGGAGCCGAGUCAGAUCGCGAGGUACCCAGAGCCGACAGACCGGAGCGACAGGGAGUUGCCAGAAGCCCCGCCCCUAGGAGUGAUCGGAAAGCCUCACCCAUCCGGGUGAGGAACCCGGAGGGACCGCCUCCGGGCGGAGCCCGCCGACCAUGGCUACGCCCCUGGUGGCGGGUCCCGCAGCUCUACGCUUCGCCGCCGCGGCUAGCUGGCAGGUUGUGCGCGGACGCUGCGUGGAACAUUUUCCGCGAGUACUGGAGUUUCUGCGAUCUCUGCGCGCUGUUGCCCCUGGCUUGGUUCGCUACCGGCACCACGAACGCCUUUGUAUGGGCCUAAAGGCCAAGGUGGUGGUGGAGCUGAUCCUGCAGGGCCGGCCUUGGGCCCAAGUCCUGAAAGCCCUGAAUCACCACUUUCCAGAAUCUGGACCUAUAGUGCGGGAUCCCAAGGCUACAAAGCAGGAUCUGAGGAAGAUUUUGGAGGCACAGGAAACUUUUUACCAGCAGGUGAAGCAGCUGUCAGAGGCUCCUGUGGAUUUGGCCUCGAAGCUGCAGAGUGCUCUGUUACUGACUCAGUGAACCUGGCUGAGCCCAUGGAACAGAAUCCUCCUCAGCAACAAAGACUAGCACUCCACAAUCCCCUGCCAAAAGCCAAGCCUGGCACACAUCUUCCUCAGGGACCAUCUUCAAGGACGCACCCAGAACCUCUAGCUGGCCGACACUUCAAUCUGGCCCCUCUAGGCCGACGAAGAGUPCAGUCCCAAUGGGCCUCCACUAGGGGAGGCCAPAAGGAGCGCCCCACAGUCAUGCUGUUUCCCUPUAGGAAUCUCGGCUCACCAACCCAGGUCAUAUCUAAGCCUGAGAGCAAGGAAGAACAUGCGAUAUACACAGCAGЖCCUAGCCAUGGGCACAAGAGCAGCCUCCACUGGGAAGUCUAAGAGUCCAUGCCAGЖCCCUGGGGGGAAGGGCUCUGAAGGAGAACCCAGUUGACUUGCCUGCCACAGAGCAAAAGGAGUGAGUGGAЖCAGAGUUGCUUCUUACUAGGAGCACAUUCUUUGCCUGCCUUCCCUUCAPCCUAUCCUCUUUGCUUGCUCUCACCUCAGGAAUUGCUUGGAUUGCUACAUGGЖCCCCCUGAGЖCUAUCAUUAUUACCUCCUAGGGCCAGGAAGCCAGGUAGGUAGUCUGAGUCAGGAUUGGAUCAACAGCCUCCUCUCUUGGGGACUCUCAAGAGCCUGUGUUCAUCUAGAAGUAGUAGUUUGAUUCUGGUUUCCCUCCUACAGUGUGUCCPCCGUCUCUGUGCAGCUCCGUCAUUACCAUAGGGGACUUGGUUUUAGACUCUGAUGAGGAAGAAAAUGGCCAGGGGGAAGGAAAGGUGAGUGGGAAGGAGCAGAAAGCUGGGAAAGGGGAUGGGUAGAACAAGACUGAGAAAUCCACAUGCUUCAGAAUUCAGAGGGUUCAGGGAAUGGUUUCGGAUAGUAGGCUCUCCCUGCUCCCUUCUCUACAGGAAUCUCUGGAAAACUAUCAGAAGACAAAGUUUGACACCUUGAUACCCACUCUCUGUGAAUACCUACCCCCUUCUGGCCACGGUGCCAUACCUGUUUCUUCCUGUGACUGUAGAGACAGUUCUAGACCUUUGUGAUAGAACUAAAAUGCUCUCUGUACUCUAGUCUCCUGCCUCCUCAGCUCUGCAAGUAGUUUAGUAGGAAUGAAGUGGAAGUCCAGGCUUGGAUUGCCUAACUACACUGCUAAAAAUA
Sequence (SHORT NAMES ENCODING)	CGGGCUCGAGACAGCGGCGACGUUUAAAGCUGAGCGACCCAGUGCCACUGGAGACGGUCAGCUUCUCCACUCAGGCUCCUCCAGCCCGAGCCAGAAGACCCCCUCCCCCAGAAUUCUGGGGGCCGAUGGAAGGGAGCCGAGUCAGAUCGCGAGGUACCCAGAGCCGACAGACCGGAGCGACAGGGAGUUGCCAGAAGCCCCGCCCCUAGGAGUGAUCGGAAAGCCUCACCCAUCCGGGUGAGGAACCCGGAGGGACCGCCUCCGGGCGGAGCCCGCCGACCAUGGCUACGCCCCUGGUGGCGGGUCCCGCAGCUCUACGCUUCGCCGCCGCGGCUAGCUGGCAGGUUGUGCGCGGACGCUGCGUGGAACAUUUUCCGCGAGUACUGGAGUUUCUGCGAUCUCUGCGCGCUGUUGCCCCUGGCUUGGUUCGCUACCGGCACCACGAACGCCUUUGUAUGGGCCUAAAGGCCAAGGUGGUGGUGGAGCUGAUCCUGCAGGGCCGGCCUUGGGCCCAAGUCCUGAAAGCCCUGAAUCACCACUUUCCAGAAUCUGGACCUAUAGUGCGGGAUCCCAAGGCUACAAAGCAGGAUCUGAGGAAGAUUUUGGAGGCACAGGAAACUUUUUACCAGCAGGUGAAGCAGCUGUCAGAGGCUCCUGUGGAUUUGGCCUCGAAGCUGCAGAGUGCUCUGUUACUGACUCAGUGAACCUGGCUGAGCCCAUGGAACAGAAUCCUCCUCAGCAACAAAGACUAGCACUCCACAAUCCCCUGCCAAAAGCCAAGCCUGGCACACAUCUUCCUCAGGGACCAUCUUCAAGGACGCACCCAGAACCUCUAGCUGGCCGACACUUCAAUCUGGCCCCUCUAGGCCGACGAAGAGUYCAGUCCCAAUGGGCCUCCACUAGGGGAGGCCAYAAGGAGCGCCCCACAGUCAUGCUGUUUCCCUYUAGGAAUCUCGGCUCACCAACCCAGGUCAUAUCUAAGCCUGAGAGCAAGGAAGAACAUGCGAUAUACACAGCAGm6ACCUAGCCAUGGGCACAAGAGCAGCCUCCACUGGGAAGUCUAAGAGUCCAUGCCAGm6ACCCUGGGGGGAAGGGCUCUGAAGGAGAACCCAGUUGACUUGCCUGCCACAGAGCAAAAGGAGUGAGUGGAm6ACAGAGUUGCUUCUUACUAGGAGCACAUUCUUUGCCUGCCUUCCCUUCAYCCUAUCCUCUUUGCUUGCUCUCACCUCAGGAAUUGCUUGGAUUGCUACAUGGm6ACCCCCUGAGm6ACUAUCAUUAUUACCUCCUAGGGCCAGGAAGCCAGGUAGGUAGUCUGAGUCAGGAUUGGAUCAACAGCCUCCUCUCUUGGGGACUCUCAAGAGCCUGUGUUCAUCUAGAAGUAGUAGUUUGAUUCUGGUUUCCCUCCUACAGUGUGUCCYCCGUCUCUGUGCAGCUCCGUCAUUACCAUAGGGGACUUGGUUUUAGACUCUGAUGAGGAAGAAAAUGGCCAGGGGGAAGGAAAGGUGAGUGGGAAGGAGCAGAAAGCUGGGAAAGGGGAUGGGUAGAACAAGACUGAGAAAUCCACAUGCUUCAGAAUUCAGAGGGUUCAGGGAAUGGUUUCGGAUAGUAGGCUCUCCCUGCUCCCUUCUCUACAGGAAUCUCUGGAAAACUAUCAGAAGACAAAGUUUGACACCUUGAUACCCACUCUCUGUGAAUACCUACCCCCUUCUGGCCACGGUGCCAUACCUGUUUCUUCCUGUGACUGUAGAGACAGUUCUAGACCUUUGUGAUAGAACUAAAAUGCUCUCUGUACUCUAGUCUCCUGCCUCCUCAGCUCUGCAAGUAGUUUAGUAGGAAUGAAGUGGAAGUCCAGGCUUGGAUUGCCUAACUACACUGCUAAAAAUA
Sequence (MODOMICS CODE ENCODING)	CGGGCUCGAGACAGCGGCGACGUUUAAAGCUGAGCGACCCAGUGCCACUGGAGACGGUCAGCUUCUCCACUCAGGCUCCUCCAGCCCGAGCCAGAAGACCCCCUCCCCCAGAAUUCUGGGGGCCGAUGGAAGGGAGCCGAGUCAGAUCGCGAGGUACCCAGAGCCGACAGACCGGAGCGACAGGGAGUUGCCAGAAGCCCCGCCCCUAGGAGUGAUCGGAAAGCCUCACCCAUCCGGGUGAGGAACCCGGAGGGACCGCCUCCGGGCGGAGCCCGCCGACCAUGGCUACGCCCCUGGUGGCGGGUCCCGCAGCUCUACGCUUCGCCGCCGCGGCUAGCUGGCAGGUUGUGCGCGGACGCUGCGUGGAACAUUUUCCGCGAGUACUGGAGUUUCUGCGAUCUCUGCGCGCUGUUGCCCCUGGCUUGGUUCGCUACCGGCACCACGAACGCCUUUGUAUGGGCCUAAAGGCCAAGGUGGUGGUGGAGCUGAUCCUGCAGGGCCGGCCUUGGGCCCAAGUCCUGAAAGCCCUGAAUCACCACUUUCCAGAAUCUGGACCUAUAGUGCGGGAUCCCAAGGCUACAAAGCAGGAUCUGAGGAAGAUUUUGGAGGCACAGGAAACUUUUUACCAGCAGGUGAAGCAGCUGUCAGAGGCUCCUGUGGAUUUGGCCUCGAAGCUGCAGAGUGCUCUGUUACUGACUCAGUGAACCUGGCUGAGCCCAUGGAACAGAAUCCUCCUCAGCAACAAAGACUAGCACUCCACAAUCCCCUGCCAAAAGCCAAGCCUGGCACACAUCUUCCUCAGGGACCAUCUUCAAGGACGCACCCAGAACCUCUAGCUGGCCGACACUUCAAUCUGGCCCCUCUAGGCCGACGAAGAGU2000000009UCAGUCCCAAUGGGCCUCCACUAGGGGAGGCCA2000000009UAAGGAGCGCCCCACAGUCAUGCUGUUUCCCU2000000009UUAGGAAUCUCGGCUCACCAACCCAGGUCAUAUCUAAGCCUGAGAGCAAGGAAGAACAUGCGAUAUACACAGCAG2000000006ACCUAGCCAUGGGCACAAGAGCAGCCUCCACUGGGAAGUCUAAGAGUCCAUGCCAG2000000006ACCCUGGGGGGAAGGGCUCUGAAGGAGAACCCAGUUGACUUGCCUGCCACAGAGCAAAAGGAGUGAGUGGA2000000006ACAGAGUUGCUUCUUACUAGGAGCACAUUCUUUGCCUGCCUUCCCUUCA2000000009UCCUAUCCUCUUUGCUUGCUCUCACCUCAGGAAUUGCUUGGAUUGCUACAUGG2000000006ACCCCCUGAG2000000006ACUAUCAUUAUUACCUCCUAGGGCCAGGAAGCCAGGUAGGUAGUCUGAGUCAGGAUUGGAUCAACAGCCUCCUCUCUUGGGGACUCUCAAGAGCCUGUGUUCAUCUAGAAGUAGUAGUUUGAUUCUGGUUUCCCUCCUACAGUGUGUCC2000000009UCCGUCUCUGUGCAGCUCCGUCAUUACCAUAGGGGACUUGGUUUUAGACUCUGAUGAGGAAGAAAAUGGCCAGGGGGAAGGAAAGGUGAGUGGGAAGGAGCAGAAAGCUGGGAAAGGGGAUGGGUAGAACAAGACUGAGAAAUCCACAUGCUUCAGAAUUCAGAGGGUUCAGGGAAUGGUUUCGGAUAGUAGGCUCUCCCUGCUCCCUUCUCUACAGGAAUCUCUGGAAAACUAUCAGAAGACAAAGUUUGACACCUUGAUACCCACUCUCUGUGAAUACCUACCCCCUUCUGGCCACGGUGCCAUACCUGUUUCUUCCUGUGACUGUAGAGACAGUUCUAGACCUUUGUGAUAGAACUAAAAUGCUCUCUGUACUCUAGUCUCCUGCCUCCUCAGCUCUGCAAGUAGUUUAGUAGGAAUGAAGUGGAAGUCCAGGCUUGGAUUGCCUAACUACACUGCUAAAAAUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	880	913	945	1020	1076	1147	1196	1249	1259	1408
Modification Positions	Y	Y	Y	m6A	m6A	m6A	Y	m6A	m6A	Y
Genomic Coordinates	14:24240676:-	14:24240643:-	14:24240611:-	14:24240536:-	14:24240480:-	14:24240409:-	14:24240360:-	14:24240307:-	14:24240297:-	14:24240148:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq f6YSioLdAWpr Yfn77uLS5tv8	jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR VL7zkHvkfkoB BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn nfCHyrYzE6fB dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	6UuHp6YApVKv gBgcfFQ5WN9C jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se 93arJtwJmuS9 ArijeGVTwYBw KTLz8piFYdwC nfCHyrYzE6fB WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 Lny8GcCeVGc9 LZJKems7W2wi BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se KTLz8piFYdwC BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G dA7YoLwHrzgR BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8