General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000557389
Gene ID:	ENSG00000100906
Gene Name:	NFKBIA
Sequence (UNICHARACTER ENCODING)	CGGGGCGGCAGCGGGGACGCGAAGUCCCCGGUUGCAUAAGGCGGGGCGGGAGUUUCUGGCCGCUGGCGGGCGCCGAGCAGCCGGGAGGGGAAGUACAGGGCGUUCCGAGCUGGCGGGAGGGCGGGGCGGUCUGGCCGGCGCCCGCCGGGGCCGCGGGGGGAGGGGGGCGGAAAGUCCCUGGGCGCCUGCCAGGAACACUCAGCUCAUAAUAACCUCGCGGAAAACACCGCGGCCUCGGCCUCCAGAAACCCCGGCCUUGCGCAAUCCCCCGCAGCCCGCGCCUCCCUGGGCCCCACGCGGUGCACUCACCACCCCUGGGGUUUUUCCCUCUCUUCCCCACAGGUUCCUGCACUUGGCCAUCAPCCAUGAAGAAAAGGCACUGACCAUGGAAGUGAUCCGCCAGGUGAAGGGAGACCUGGCCUUCCUCAACUUCCAGAACAACCUGCAGCAGACUCCACUCCACUUGGCUGUGAUCACCAACCAGCCAGAAAUUGCUGAGGCACUUCUGGGAGCUGGCUGUGAUCCUGAGCUCCGAGACUUUCGAGGAAAUACCCCCCUACACCUUGCCUGUGAGCAGGGCUGCCUGGCCAGCGUGGGAGUCCUGACUCAGUCCUGCACCACCCCGCACCUCCACUCCAPCCUGAAGGCUACCAACUACAAUGGCCACACGUGUCUACACUUAGCCUCUAUCCAUGGCUACCUGGGCAUCGUGGAGCUUUUGGUGUCCUUGGGUGCUGAUGUCAAUGCUCAGGAGCCCUGUAAUGGCCGGACUGCCCUUCACCUCGCAGUGGACCUGCAAAAUCCUGACCUGGUGUCACUCCUGUUGAAGUGUGGGGCUGAUGUCAACAGAGUUACCUACCAGGGCUAUUCUCCCUACCAGCUCACCUGGGGCCGCCCAAGCACCCGGAUACAGCAGCAGCUGGGCCAGCUGACACUAGAAAACCUUCAGAUGCUGCCAGAGAGUGAGGAUGAGGAGAGCUAUGACACAGAGUCAGAGUUCACGGAGUUCACAGAGGACGAGCUGCCCUAUGAUGACUGUGUGUUUGGAGGCCAGCGUCUGACGUUAUGЖGCGCAAAGGGGCUGAAAGAACAUGGЖCUUGUAUAUUUGUACAAAAAAAAAGUUUUAUUUUUCUAAAAAAAGAAAAAAGAAGAAAAAAUUUAAAGGGUGUACUUAUAUCCACACUGCACACUGCCUGGCCCAAAACGUCUUAUUGUGGUAGGAUCAGCCCUCAUUUUGUUGCUUUUGUGAЖCUUUUUGUAGGGGACGAGAAAGAUCAUUGAAAUUCUGAGAAAACUUCUUUUAAACCUCACCUUUGUGGGGUUUUUGGAGAAGGUUAUCAAAAAUUUCAUGGAAGGACCACAUUUUAUAUUUAUUGUGCUUCGAGUGACUGACCCCAGUGGUAUCCUGUGACAUGUAЖCAGCCAGGAGUGUUAAGCGUUCAGUGAUGUGGGGUGAAAAGUUACUACCUGUCAAGGUUUGUGUUACCCUCCUGUAAAUGGUGUACAUAAUGUAUUGUUGGUAAUUAUUUUGGUACUUUUA
Sequence (SHORT NAMES ENCODING)	CGGGGCGGCAGCGGGGACGCGAAGUCCCCGGUUGCAUAAGGCGGGGCGGGAGUUUCUGGCCGCUGGCGGGCGCCGAGCAGCCGGGAGGGGAAGUACAGGGCGUUCCGAGCUGGCGGGAGGGCGGGGCGGUCUGGCCGGCGCCCGCCGGGGCCGCGGGGGGAGGGGGGCGGAAAGUCCCUGGGCGCCUGCCAGGAACACUCAGCUCAUAAUAACCUCGCGGAAAACACCGCGGCCUCGGCCUCCAGAAACCCCGGCCUUGCGCAAUCCCCCGCAGCCCGCGCCUCCCUGGGCCCCACGCGGUGCACUCACCACCCCUGGGGUUUUUCCCUCUCUUCCCCACAGGUUCCUGCACUUGGCCAUCAYCCAUGAAGAAAAGGCACUGACCAUGGAAGUGAUCCGCCAGGUGAAGGGAGACCUGGCCUUCCUCAACUUCCAGAACAACCUGCAGCAGACUCCACUCCACUUGGCUGUGAUCACCAACCAGCCAGAAAUUGCUGAGGCACUUCUGGGAGCUGGCUGUGAUCCUGAGCUCCGAGACUUUCGAGGAAAUACCCCCCUACACCUUGCCUGUGAGCAGGGCUGCCUGGCCAGCGUGGGAGUCCUGACUCAGUCCUGCACCACCCCGCACCUCCACUCCAYCCUGAAGGCUACCAACUACAAUGGCCACACGUGUCUACACUUAGCCUCUAUCCAUGGCUACCUGGGCAUCGUGGAGCUUUUGGUGUCCUUGGGUGCUGAUGUCAAUGCUCAGGAGCCCUGUAAUGGCCGGACUGCCCUUCACCUCGCAGUGGACCUGCAAAAUCCUGACCUGGUGUCACUCCUGUUGAAGUGUGGGGCUGAUGUCAACAGAGUUACCUACCAGGGCUAUUCUCCCUACCAGCUCACCUGGGGCCGCCCAAGCACCCGGAUACAGCAGCAGCUGGGCCAGCUGACACUAGAAAACCUUCAGAUGCUGCCAGAGAGUGAGGAUGAGGAGAGCUAUGACACAGAGUCAGAGUUCACGGAGUUCACAGAGGACGAGCUGCCCUAUGAUGACUGUGUGUUUGGAGGCCAGCGUCUGACGUUAUGm6AGCGCAAAGGGGCUGAAAGAACAUGGm6ACUUGUAUAUUUGUACAAAAAAAAAGUUUUAUUUUUCUAAAAAAAGAAAAAAGAAGAAAAAAUUUAAAGGGUGUACUUAUAUCCACACUGCACACUGCCUGGCCCAAAACGUCUUAUUGUGGUAGGAUCAGCCCUCAUUUUGUUGCUUUUGUGAm6ACUUUUUGUAGGGGACGAGAAAGAUCAUUGAAAUUCUGAGAAAACUUCUUUUAAACCUCACCUUUGUGGGGUUUUUGGAGAAGGUUAUCAAAAAUUUCAUGGAAGGACCACAUUUUAUAUUUAUUGUGCUUCGAGUGACUGACCCCAGUGGUAUCCUGUGACAUGUAm6ACAGCCAGGAGUGUUAAGCGUUCAGUGAUGUGGGGUGAAAAGUUACUACCUGUCAAGGUUUGUGUUACCCUCCUGUAAAUGGUGUACAUAAUGUAUUGUUGGUAAUUAUUUUGGUACUUUUA
Sequence (MODOMICS CODE ENCODING)	CGGGGCGGCAGCGGGGACGCGAAGUCCCCGGUUGCAUAAGGCGGGGCGGGAGUUUCUGGCCGCUGGCGGGCGCCGAGCAGCCGGGAGGGGAAGUACAGGGCGUUCCGAGCUGGCGGGAGGGCGGGGCGGUCUGGCCGGCGCCCGCCGGGGCCGCGGGGGGAGGGGGGCGGAAAGUCCCUGGGCGCCUGCCAGGAACACUCAGCUCAUAAUAACCUCGCGGAAAACACCGCGGCCUCGGCCUCCAGAAACCCCGGCCUUGCGCAAUCCCCCGCAGCCCGCGCCUCCCUGGGCCCCACGCGGUGCACUCACCACCCCUGGGGUUUUUCCCUCUCUUCCCCACAGGUUCCUGCACUUGGCCAUCA2000000009UCCAUGAAGAAAAGGCACUGACCAUGGAAGUGAUCCGCCAGGUGAAGGGAGACCUGGCCUUCCUCAACUUCCAGAACAACCUGCAGCAGACUCCACUCCACUUGGCUGUGAUCACCAACCAGCCAGAAAUUGCUGAGGCACUUCUGGGAGCUGGCUGUGAUCCUGAGCUCCGAGACUUUCGAGGAAAUACCCCCCUACACCUUGCCUGUGAGCAGGGCUGCCUGGCCAGCGUGGGAGUCCUGACUCAGUCCUGCACCACCCCGCACCUCCACUCCA2000000009UCCUGAAGGCUACCAACUACAAUGGCCACACGUGUCUACACUUAGCCUCUAUCCAUGGCUACCUGGGCAUCGUGGAGCUUUUGGUGUCCUUGGGUGCUGAUGUCAAUGCUCAGGAGCCCUGUAAUGGCCGGACUGCCCUUCACCUCGCAGUGGACCUGCAAAAUCCUGACCUGGUGUCACUCCUGUUGAAGUGUGGGGCUGAUGUCAACAGAGUUACCUACCAGGGCUAUUCUCCCUACCAGCUCACCUGGGGCCGCCCAAGCACCCGGAUACAGCAGCAGCUGGGCCAGCUGACACUAGAAAACCUUCAGAUGCUGCCAGAGAGUGAGGAUGAGGAGAGCUAUGACACAGAGUCAGAGUUCACGGAGUUCACAGAGGACGAGCUGCCCUAUGAUGACUGUGUGUUUGGAGGCCAGCGUCUGACGUUAUG2000000006AGCGCAAAGGGGCUGAAAGAACAUGG2000000006ACUUGUAUAUUUGUACAAAAAAAAAGUUUUAUUUUUCUAAAAAAAGAAAAAAGAAGAAAAAAUUUAAAGGGUGUACUUAUAUCCACACUGCACACUGCCUGGCCCAAAACGUCUUAUUGUGGUAGGAUCAGCCCUCAUUUUGUUGCUUUUGUGA2000000006ACUUUUUGUAGGGGACGAGAAAGAUCAUUGAAAUUCUGAGAAAACUUCUUUUAAACCUCACCUUUGUGGGGUUUUUGGAGAAGGUUAUCAAAAAUUUCAUGGAAGGACCACAUUUUAUAUUUAUUGUGCUUCGAGUGACUGACCCCAGUGGUAUCCUGUGACAUGUA2000000006ACAGCCAGGAGUGUUAAGCGUUCAGUGAUGUGGGGUGAAAAGUUACUACCUGUCAAGGUUUGUGUUACCCUCCUGUAAAUGGUGUACAUAAUGUAUUGUUGGUAAUUAUUUUGGUACUUUUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	363	639	1069	1095	1249	1416
Modification Positions	Y	Y	m6A	m6A	m6A	m6A
Genomic Coordinates	14:35403778:-	14:35403173:-	14:35402013:-	14:35401987:-	14:35401833:-	14:35401666:-
Level of Experimental Evidence	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 Yfn77uLS5tv8	834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL	5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 8cMbzB4aD5Se ArijeGVTwYBw WiQcrNTGZHPT Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U ArijeGVTwYBw KTLz8piFYdwC KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8