General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000358377
Gene ID:	ENSG00000119599
Gene Name:	DCAF4
Sequence (UNICHARACTER ENCODING)	CUUUCCGGGUCCUUGCACGCUUCGCUCCAACUCCUGCAGAGCUGAGCCGGAGGGGAAUCCGGAAGGGACACGCUGAACAGGAACAGAAAUGAAUAAAAGUCGCUGGCAGAGUAGAAGACGACAUGGGAGAAGAAGCCACCAGCAGAACCCUUGGUUCAGACUCCGUGAUUCUGAAGACAGGUCUGACUCCCGGGCAGCACAGCCCGCUCACGAUUCCGGCCACGGUGAUGACGAGUCUCCGUCAACCUCGUCUGGCACAGCUGGGACCUCCUCUGUGCCAGAGCUACCUGGGUUUUACUUUGACCCUGAAAAGAAACGCUACUUCCGCUUGCUCCCUGGACAUAACAACUGCAACCCCCUGACGAAAGAGAGCAUCCGGCAGAAGGAGAUGGAGAGCAAGAGACUGCGGCUGCUCCAGGAAGAAGACAGACGGAAAAAGAUUGCCAGGAUGGGAUUUAAUGCAUCUUCCAUGCUACGAAAAAGCCAGCUGGGUUUUCUCAACGUCACCAAUUACUGCCAUUUAGCCCACGAGCUGCGUCUCAGCUGCAUGGAGAGGAAAAAGGUCCAGAUUCGAAGCAUGGAUCCCUCCGCCUUGGCAAGCGACCGAUUUAACCUCAUACUGGCAGAUACCAACAGUGACCGGCUCUUCACAGUGAACGAUGUUAAAGUUGGAGGCUCCAAGUAUGGUAUCAUCAACCUGCAAAGUCUGAAGACCCCUACGCUCAAGGUGUUCAUGCACGAAAACCUCUACUUCACCAACCGGAAGGUGAAUUCGGUGUGCUGGGCCUCGCUGAAUCACUUGGAUUCCCACAUUCUGCUAUGCCUCAUGGGACUCGCAGAGACUCCAGGCUGUGCCACCCUGCUCCCAGCAUCACUGUUCGUCAAUAGUCACCCAGGAAUAGACCGGCCUGGCAUGCUCUGCAGUUUCCGGAUCCCUGGUGCCUGGUCCUGUGCCUGGUCCCUGAAUAUCCAAGCAAAUAACUGCUUCAGUACAGGCUUGUCUCGGCGGGUCCUGUUGACCAACGUGGUGACGGGACACCGGCAGUCCUUUGGGACCAACAGUGAUGUCUUGGCCCAGCAGUUUGCUCUCAUGGCUCCUCUGCUGUUUAAUGGCUGCCGCUCUGGGGAAAUCUUUGCCAUUGAUCUGCGUUGUGGAAAUCAAGGCAAGGGAUGGAAGGCCACCCGCCUGUUUCAUGAUUCAGCAGUGACCUCUGUGCGGAUCCUCCAAGAUGAGCAAUACCUGAUGGCUUCAGACAUGGCUGGAAAGAUCAAGCUGUGGGACCUGAGGACCACGAAGUGCGUAAGGCAGUACGAAGGCCACGUGAAUGAGUACGCCUACCUGCCCCUGCAUGUGCACGAGGAAGAAGGAAUCCUGGUGGCAGUGGGCCAGGACUGCUACACGAGAAUCUGGAGCCUCCACGAUGCCCGCCUACUGAGAACCAUACCCUCCCCGUACCCUGCCUCCAAGGCCGACAUUCCCAGUGUGGCCUUCUCGUCGCGGCUGGGGGGCUCCCGGGGCGCGCCGGGGCUGCUCAUGGCUGUCGGGCAGGЖCCUUUACUGUUACUCCUACAGCUAAUUCUGCAGGGCACAGCCCAGAGCCAUGUGGAUPUGACUUACGGGAGUAAAGCGUAACUUUUUACUGCAUCUAAUGAGGGUGUUUUAAGUGACACUCAGUGUACACAGAUCCCAPCCUCUGGCUGCUAGGAGAGAAGUGCUGAAUGUUCCGUGUGGAGAUGCUCAGGЖAAGUUAUUUGAGUUAAAUUGCUGGCUGAGAGAGCUUGGAAGUCCUUUUCAUAAAAGGUACCUCUUUCCUUUUCUUAUUGAAUUCUUAGAACUUAGUUAACCCUCCCUGCCUUUUCUUAACAAAAAGGЖCUUUUCUAAGGЖCUGAAGAUUGGCAAAAACGAAAAGCUUCUUCCUCCAAGAGCCCAUUGAAGAAGCCCAGUGAUGAGACGGUGAGAUGGUUUGAGUCCUCGGUGCCUGGGUAGCAGGAAGAAAGACCUGCAPCCUGCAUCUGUACUUGGGGAAGCCAGCGGAGAGGACGGGGAGGUUACUUCUCUAAGUUUCUGCAGAAAUAUUGAAGGCUGGAGUUUGGAAUCCUUAAACUUGGCCUUCUCAAACUCAGCAGCAGAUCUCCGGGAUUCUGCUGUUAUUAUCCAAAGGCGUUGGAAGGAAAGAUGGAUCUUCUUACAUGCUAGAAGUUUUAAACGGUCCUUAЖCAUGCCUUUGUUCAAGCACCUUCCAGAAUGUAAGGUUCAGCAGCUCUGGUUUCUAUUACGGUGACUUGAAUGUCAGAUUCAAGGGCCCGGCGUCAAAGGAAAUUGGUUUUGACUUUUUGUAAUCUAGGAGCGACAGUUCGUGAGAUGUUUAUUCAGUGUUAAAGAGCCUGUUUUUCUACCAAACAAUAAAACCAAGAGAAGAAUCAUGGUGUGACAUGCACUUCUGUGAAUGACUUAGGAGAUCAUGAGCUUGGGCUGCU
Sequence (SHORT NAMES ENCODING)	CUUUCCGGGUCCUUGCACGCUUCGCUCCAACUCCUGCAGAGCUGAGCCGGAGGGGAAUCCGGAAGGGACACGCUGAACAGGAACAGAAAUGAAUAAAAGUCGCUGGCAGAGUAGAAGACGACAUGGGAGAAGAAGCCACCAGCAGAACCCUUGGUUCAGACUCCGUGAUUCUGAAGACAGGUCUGACUCCCGGGCAGCACAGCCCGCUCACGAUUCCGGCCACGGUGAUGACGAGUCUCCGUCAACCUCGUCUGGCACAGCUGGGACCUCCUCUGUGCCAGAGCUACCUGGGUUUUACUUUGACCCUGAAAAGAAACGCUACUUCCGCUUGCUCCCUGGACAUAACAACUGCAACCCCCUGACGAAAGAGAGCAUCCGGCAGAAGGAGAUGGAGAGCAAGAGACUGCGGCUGCUCCAGGAAGAAGACAGACGGAAAAAGAUUGCCAGGAUGGGAUUUAAUGCAUCUUCCAUGCUACGAAAAAGCCAGCUGGGUUUUCUCAACGUCACCAAUUACUGCCAUUUAGCCCACGAGCUGCGUCUCAGCUGCAUGGAGAGGAAAAAGGUCCAGAUUCGAAGCAUGGAUCCCUCCGCCUUGGCAAGCGACCGAUUUAACCUCAUACUGGCAGAUACCAACAGUGACCGGCUCUUCACAGUGAACGAUGUUAAAGUUGGAGGCUCCAAGUAUGGUAUCAUCAACCUGCAAAGUCUGAAGACCCCUACGCUCAAGGUGUUCAUGCACGAAAACCUCUACUUCACCAACCGGAAGGUGAAUUCGGUGUGCUGGGCCUCGCUGAAUCACUUGGAUUCCCACAUUCUGCUAUGCCUCAUGGGACUCGCAGAGACUCCAGGCUGUGCCACCCUGCUCCCAGCAUCACUGUUCGUCAAUAGUCACCCAGGAAUAGACCGGCCUGGCAUGCUCUGCAGUUUCCGGAUCCCUGGUGCCUGGUCCUGUGCCUGGUCCCUGAAUAUCCAAGCAAAUAACUGCUUCAGUACAGGCUUGUCUCGGCGGGUCCUGUUGACCAACGUGGUGACGGGACACCGGCAGUCCUUUGGGACCAACAGUGAUGUCUUGGCCCAGCAGUUUGCUCUCAUGGCUCCUCUGCUGUUUAAUGGCUGCCGCUCUGGGGAAAUCUUUGCCAUUGAUCUGCGUUGUGGAAAUCAAGGCAAGGGAUGGAAGGCCACCCGCCUGUUUCAUGAUUCAGCAGUGACCUCUGUGCGGAUCCUCCAAGAUGAGCAAUACCUGAUGGCUUCAGACAUGGCUGGAAAGAUCAAGCUGUGGGACCUGAGGACCACGAAGUGCGUAAGGCAGUACGAAGGCCACGUGAAUGAGUACGCCUACCUGCCCCUGCAUGUGCACGAGGAAGAAGGAAUCCUGGUGGCAGUGGGCCAGGACUGCUACACGAGAAUCUGGAGCCUCCACGAUGCCCGCCUACUGAGAACCAUACCCUCCCCGUACCCUGCCUCCAAGGCCGACAUUCCCAGUGUGGCCUUCUCGUCGCGGCUGGGGGGCUCCCGGGGCGCGCCGGGGCUGCUCAUGGCUGUCGGGCAGGm6ACCUUUACUGUUACUCCUACAGCUAAUUCUGCAGGGCACAGCCCAGAGCCAUGUGGAUYUGACUUACGGGAGUAAAGCGUAACUUUUUACUGCAUCUAAUGAGGGUGUUUUAAGUGACACUCAGUGUACACAGAUCCCAYCCUCUGGCUGCUAGGAGAGAAGUGCUGAAUGUUCCGUGUGGAGAUGCUCAGGm6AAAGUUAUUUGAGUUAAAUUGCUGGCUGAGAGAGCUUGGAAGUCCUUUUCAUAAAAGGUACCUCUUUCCUUUUCUUAUUGAAUUCUUAGAACUUAGUUAACCCUCCCUGCCUUUUCUUAACAAAAAGGm6ACUUUUCUAAGGm6ACUGAAGAUUGGCAAAAACGAAAAGCUUCUUCCUCCAAGAGCCCAUUGAAGAAGCCCAGUGAUGAGACGGUGAGAUGGUUUGAGUCCUCGGUGCCUGGGUAGCAGGAAGAAAGACCUGCAYCCUGCAUCUGUACUUGGGGAAGCCAGCGGAGAGGACGGGGAGGUUACUUCUCUAAGUUUCUGCAGAAAUAUUGAAGGCUGGAGUUUGGAAUCCUUAAACUUGGCCUUCUCAAACUCAGCAGCAGAUCUCCGGGAUUCUGCUGUUAUUAUCCAAAGGCGUUGGAAGGAAAGAUGGAUCUUCUUACAUGCUAGAAGUUUUAAACGGUCCUUAm6ACAUGCCUUUGUUCAAGCACCUUCCAGAAUGUAAGGUUCAGCAGCUCUGGUUUCUAUUACGGUGACUUGAAUGUCAGAUUCAAGGGCCCGGCGUCAAAGGAAAUUGGUUUUGACUUUUUGUAAUCUAGGAGCGACAGUUCGUGAGAUGUUUAUUCAGUGUUAAAGAGCCUGUUUUUCUACCAAACAAUAAAACCAAGAGAAGAAUCAUGGUGUGACAUGCACUUCUGUGAAUGACUUAGGAGAUCAUGAGCUUGGGCUGCU
Sequence (MODOMICS CODE ENCODING)	CUUUCCGGGUCCUUGCACGCUUCGCUCCAACUCCUGCAGAGCUGAGCCGGAGGGGAAUCCGGAAGGGACACGCUGAACAGGAACAGAAAUGAAUAAAAGUCGCUGGCAGAGUAGAAGACGACAUGGGAGAAGAAGCCACCAGCAGAACCCUUGGUUCAGACUCCGUGAUUCUGAAGACAGGUCUGACUCCCGGGCAGCACAGCCCGCUCACGAUUCCGGCCACGGUGAUGACGAGUCUCCGUCAACCUCGUCUGGCACAGCUGGGACCUCCUCUGUGCCAGAGCUACCUGGGUUUUACUUUGACCCUGAAAAGAAACGCUACUUCCGCUUGCUCCCUGGACAUAACAACUGCAACCCCCUGACGAAAGAGAGCAUCCGGCAGAAGGAGAUGGAGAGCAAGAGACUGCGGCUGCUCCAGGAAGAAGACAGACGGAAAAAGAUUGCCAGGAUGGGAUUUAAUGCAUCUUCCAUGCUACGAAAAAGCCAGCUGGGUUUUCUCAACGUCACCAAUUACUGCCAUUUAGCCCACGAGCUGCGUCUCAGCUGCAUGGAGAGGAAAAAGGUCCAGAUUCGAAGCAUGGAUCCCUCCGCCUUGGCAAGCGACCGAUUUAACCUCAUACUGGCAGAUACCAACAGUGACCGGCUCUUCACAGUGAACGAUGUUAAAGUUGGAGGCUCCAAGUAUGGUAUCAUCAACCUGCAAAGUCUGAAGACCCCUACGCUCAAGGUGUUCAUGCACGAAAACCUCUACUUCACCAACCGGAAGGUGAAUUCGGUGUGCUGGGCCUCGCUGAAUCACUUGGAUUCCCACAUUCUGCUAUGCCUCAUGGGACUCGCAGAGACUCCAGGCUGUGCCACCCUGCUCCCAGCAUCACUGUUCGUCAAUAGUCACCCAGGAAUAGACCGGCCUGGCAUGCUCUGCAGUUUCCGGAUCCCUGGUGCCUGGUCCUGUGCCUGGUCCCUGAAUAUCCAAGCAAAUAACUGCUUCAGUACAGGCUUGUCUCGGCGGGUCCUGUUGACCAACGUGGUGACGGGACACCGGCAGUCCUUUGGGACCAACAGUGAUGUCUUGGCCCAGCAGUUUGCUCUCAUGGCUCCUCUGCUGUUUAAUGGCUGCCGCUCUGGGGAAAUCUUUGCCAUUGAUCUGCGUUGUGGAAAUCAAGGCAAGGGAUGGAAGGCCACCCGCCUGUUUCAUGAUUCAGCAGUGACCUCUGUGCGGAUCCUCCAAGAUGAGCAAUACCUGAUGGCUUCAGACAUGGCUGGAAAGAUCAAGCUGUGGGACCUGAGGACCACGAAGUGCGUAAGGCAGUACGAAGGCCACGUGAAUGAGUACGCCUACCUGCCCCUGCAUGUGCACGAGGAAGAAGGAAUCCUGGUGGCAGUGGGCCAGGACUGCUACACGAGAAUCUGGAGCCUCCACGAUGCCCGCCUACUGAGAACCAUACCCUCCCCGUACCCUGCCUCCAAGGCCGACAUUCCCAGUGUGGCCUUCUCGUCGCGGCUGGGGGGCUCCCGGGGCGCGCCGGGGCUGCUCAUGGCUGUCGGGCAGG2000000006ACCUUUACUGUUACUCCUACAGCUAAUUCUGCAGGGCACAGCCCAGAGCCAUGUGGAU2000000009UUGACUUACGGGAGUAAAGCGUAACUUUUUACUGCAUCUAAUGAGGGUGUUUUAAGUGACACUCAGUGUACACAGAUCCCA2000000009UCCUCUGGCUGCUAGGAGAGAAGUGCUGAAUGUUCCGUGUGGAGAUGCUCAGG2000000006AAAGUUAUUUGAGUUAAAUUGCUGGCUGAGAGAGCUUGGAAGUCCUUUUCAUAAAAGGUACCUCUUUCCUUUUCUUAUUGAAUUCUUAGAACUUAGUUAACCCUCCCUGCCUUUUCUUAACAAAAAGG2000000006ACUUUUCUAAGG2000000006ACUGAAGAUUGGCAAAAACGAAAAGCUUCUUCCUCCAAGAGCCCAUUGAAGAAGCCCAGUGAUGAGACGGUGAGAUGGUUUGAGUCCUCGGUGCCUGGGUAGCAGGAAGAAAGACCUGCA2000000009UCCUGCAUCUGUACUUGGGGAAGCCAGCGGAGAGGACGGGGAGGUUACUUCUCUAAGUUUCUGCAGAAAUAUUGAAGGCUGGAGUUUGGAAUCCUUAAACUUGGCCUUCUCAAACUCAGCAGCAGAUCUCCGGGAUUCUGCUGUUAUUAUCCAAAGGCGUUGGAAGGAAAGAUGGAUCUUCUUACAUGCUAGAAGUUUUAAACGGUCCUUA2000000006ACAUGCCUUUGUUCAAGCACCUUCCAGAAUGUAAGGUUCAGCAGCUCUGGUUUCUAUUACGGUGACUUGAAUGUCAGAUUCAAGGGCCCGGCGUCAAAGGAAAUUGGUUUUGACUUUUUGUAAUCUAGGAGCGACAGUUCGUGAGAUGUUUAUUCAGUGUUAAAGAGCCUGUUUUUCUACCAAACAAUAAAACCAAGAGAAGAAUCAUGGUGUGACAUGCACUUCUGUGAAUGACUUAGGAGAUCAUGAGCUUGGGCUGCU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1551	1609	1690	1743	1871	1883	2003	2214
Modification Positions	m6A	Y	Y	m6A	m6A	m6A	Y	m6A
Genomic Coordinates	14:72958780:+	14:72958838:+	14:72958919:+	14:72958972:+	14:72959100:+	14:72959112:+	14:72959232:+	14:72959443:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	5aTkEfEpX8Xm gBgcfFQ5WN9C gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8