General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000603633
Gene ID:	ENSG00000270816
Gene Name:	LINC00221
Sequence (UNICHARACTER ENCODING)	GCCCЖCUUCCCGACAGCCCCCGCGCAUCUCUGUGGCAGCUGCUCCGUGCUUCCCGCCCCGCCGCGCCCGCCCACCCAACGGCGCUGUGUCCCGCCGGUAGCUCAGCGGGGACUUCCUUUAUGUGGUACAGGGUUGGGCCUGGAGACCCGGAUGCCGGCGAGGUCCUGGCUGGGAGAGGCCGCCGCUGCCUUCAGGUUUCCGAGACAAUGGAGACUCUGAGAACAUCCAGAAAUAUCCACAGGACUGGCGAGGCUGUGGGCUUUCAACCACCACGAGAGGCUGUUUGCAUAUGAUUCUUCUAAAAUUGACAUCAGUGAAAUGCCUUGAAGAUAAUAAAGUGUUGAAGAAAUAAACAAAAUCAGAAUAUAUGGGAUCAGUUAGAAAGCUCUUAUUUAAGUAAUACAAACCAUGUCCUCAGAUGUCACAGAGCUCAGGUAUAGUCAAAAUUGUUUCUUGGAUGAAUCUCUGGAGAAGGAGAGUUGGCUCUGCAGAGAUGGAUCAUCGUGUGUGUCACCCUUGCAAUGUGUUCCUGACAGCCCAUGGAAGCGGGCUAGUGGAUUCAGCUCCAGCAGUAЖCUGUUGGUUGGGAUGGЖCAACCCAGAAAUGGGGCAUGUGAGGAAGAGAAAAUGAAAGUGGAUAGCCUGUUACCGAAAACUGCUGGЖCUAAGЖCACUUGUAAGCCUGUCAAUCUCAGUGGCCAACAGACAUGAAAAAAAUUUCCAACAUCAUUAAUUAUCAGAGAAAUGCAAAUAAAAACAACAAUGAAAUACCAUCUCAGACCAGUCAUAAUAGCUAAUAUGAAAAAAGUUAAACAAAAAACAGCUGCUGGGUGGGAAGUGAAGAAAAGGGAACACAUACAUGGGUGGUGGAAAUGUAAAUUAGUUCAGCACUGUGCAAAGCAGUUUAGAGAAUUCUCAAAGAACUUGAAACAGAGCUACUGUUUGACCCAGCAAUCCCAUCAUUAGGUAUAUAGCCAAAGUAAAAUAAAUCAUUCUACCAAAAAAUGCACAUGCACUCAUGCCUCUUGCCACACUAUUCACAACAGCAAAGAUAUGGAAUCAAUCUAGGUGCCAAUCAAUGAUGUAUUAGAUGAAUAAAAUGGUAUGUAUGCAAUAUAAAAUCAUAAAAUACCACACAUUCAUAAAAAAAAGUGUGGUGGCUCACACCUAUAAUCCCAGCACUUUGGGAGGCUGAGGCAGACAGAUCAUGAGGUCAGGAGAUCAAGAUCAUCCUGGCCAAUAUAGUGAAACCCCCUCUCUGCUAAAAAUACAAAAUUUAGCUGGGCAUAGUGGCACAUGCCUGUAAUCCCAGCUACCCGGGAGGCUGAGGCAGGAGAAUCACUUGAACCAGGGACUUAGAGGUUGCAGUAAGCUGAGAUCGCGUCACUGCACUCCUGCCUGGUGAGAGAGUGAGACUCUGUCACAAAAGAAACAAAAUCAUGUCCUUUGCAGCAACAUGGAUGCAGCUGGAGGUCAUAGUCGUAAACAAGUUAACACAGAAAAAGGAAACAAAAUAUCACAUGUUCUCACUUGAAAGUGAGUGCUAAAGGUUGAGCACAUGUGGЖCAUGACCAUGGAAACAAUAGGCACUGUGAЖCUGCUGGAGUGGGGAGGGAGAGAGAGGUGCAUGGGUUGAAAGЖCUGACUAUUGGGUAUUAUGCUAACUCCCUGGGUGAGGGGAUCCAUACCCCAAACCUCAGCAUCACACAAUAUGCCCAUGUAAAAAAACUUGCAUAUGUACCCCCUGUACCUGAAAUAAAAGUUGAAAUUUUAAAAAUAAUAUUAAAAUUAUAAUUAAAUAAUUUUUCUUCAAUUUUUUGAAUAGUUUAACAAUAA
Sequence (SHORT NAMES ENCODING)	GCCCm6ACUUCCCGACAGCCCCCGCGCAUCUCUGUGGCAGCUGCUCCGUGCUUCCCGCCCCGCCGCGCCCGCCCACCCAACGGCGCUGUGUCCCGCCGGUAGCUCAGCGGGGACUUCCUUUAUGUGGUACAGGGUUGGGCCUGGAGACCCGGAUGCCGGCGAGGUCCUGGCUGGGAGAGGCCGCCGCUGCCUUCAGGUUUCCGAGACAAUGGAGACUCUGAGAACAUCCAGAAAUAUCCACAGGACUGGCGAGGCUGUGGGCUUUCAACCACCACGAGAGGCUGUUUGCAUAUGAUUCUUCUAAAAUUGACAUCAGUGAAAUGCCUUGAAGAUAAUAAAGUGUUGAAGAAAUAAACAAAAUCAGAAUAUAUGGGAUCAGUUAGAAAGCUCUUAUUUAAGUAAUACAAACCAUGUCCUCAGAUGUCACAGAGCUCAGGUAUAGUCAAAAUUGUUUCUUGGAUGAAUCUCUGGAGAAGGAGAGUUGGCUCUGCAGAGAUGGAUCAUCGUGUGUGUCACCCUUGCAAUGUGUUCCUGACAGCCCAUGGAAGCGGGCUAGUGGAUUCAGCUCCAGCAGUAm6ACUGUUGGUUGGGAUGGm6ACAACCCAGAAAUGGGGCAUGUGAGGAAGAGAAAAUGAAAGUGGAUAGCCUGUUACCGAAAACUGCUGGm6ACUAAGm6ACACUUGUAAGCCUGUCAAUCUCAGUGGCCAACAGACAUGAAAAAAAUUUCCAACAUCAUUAAUUAUCAGAGAAAUGCAAAUAAAAACAACAAUGAAAUACCAUCUCAGACCAGUCAUAAUAGCUAAUAUGAAAAAAGUUAAACAAAAAACAGCUGCUGGGUGGGAAGUGAAGAAAAGGGAACACAUACAUGGGUGGUGGAAAUGUAAAUUAGUUCAGCACUGUGCAAAGCAGUUUAGAGAAUUCUCAAAGAACUUGAAACAGAGCUACUGUUUGACCCAGCAAUCCCAUCAUUAGGUAUAUAGCCAAAGUAAAAUAAAUCAUUCUACCAAAAAAUGCACAUGCACUCAUGCCUCUUGCCACACUAUUCACAACAGCAAAGAUAUGGAAUCAAUCUAGGUGCCAAUCAAUGAUGUAUUAGAUGAAUAAAAUGGUAUGUAUGCAAUAUAAAAUCAUAAAAUACCACACAUUCAUAAAAAAAAGUGUGGUGGCUCACACCUAUAAUCCCAGCACUUUGGGAGGCUGAGGCAGACAGAUCAUGAGGUCAGGAGAUCAAGAUCAUCCUGGCCAAUAUAGUGAAACCCCCUCUCUGCUAAAAAUACAAAAUUUAGCUGGGCAUAGUGGCACAUGCCUGUAAUCCCAGCUACCCGGGAGGCUGAGGCAGGAGAAUCACUUGAACCAGGGACUUAGAGGUUGCAGUAAGCUGAGAUCGCGUCACUGCACUCCUGCCUGGUGAGAGAGUGAGACUCUGUCACAAAAGAAACAAAAUCAUGUCCUUUGCAGCAACAUGGAUGCAGCUGGAGGUCAUAGUCGUAAACAAGUUAACACAGAAAAAGGAAACAAAAUAUCACAUGUUCUCACUUGAAAGUGAGUGCUAAAGGUUGAGCACAUGUGGm6ACAUGACCAUGGAAACAAUAGGCACUGUGAm6ACUGCUGGAGUGGGGAGGGAGAGAGAGGUGCAUGGGUUGAAAGm6ACUGACUAUUGGGUAUUAUGCUAACUCCCUGGGUGAGGGGAUCCAUACCCCAAACCUCAGCAUCACACAAUAUGCCCAUGUAAAAAAACUUGCAUAUGUACCCCCUGUACCUGAAAUAAAAGUUGAAAUUUUAAAAAUAAUAUUAAAAUUAUAAUUAAAUAAUUUUUCUUCAAUUUUUUGAAUAGUUUAACAAUAA
Sequence (MODOMICS CODE ENCODING)	GCCC2000000006ACUUCCCGACAGCCCCCGCGCAUCUCUGUGGCAGCUGCUCCGUGCUUCCCGCCCCGCCGCGCCCGCCCACCCAACGGCGCUGUGUCCCGCCGGUAGCUCAGCGGGGACUUCCUUUAUGUGGUACAGGGUUGGGCCUGGAGACCCGGAUGCCGGCGAGGUCCUGGCUGGGAGAGGCCGCCGCUGCCUUCAGGUUUCCGAGACAAUGGAGACUCUGAGAACAUCCAGAAAUAUCCACAGGACUGGCGAGGCUGUGGGCUUUCAACCACCACGAGAGGCUGUUUGCAUAUGAUUCUUCUAAAAUUGACAUCAGUGAAAUGCCUUGAAGAUAAUAAAGUGUUGAAGAAAUAAACAAAAUCAGAAUAUAUGGGAUCAGUUAGAAAGCUCUUAUUUAAGUAAUACAAACCAUGUCCUCAGAUGUCACAGAGCUCAGGUAUAGUCAAAAUUGUUUCUUGGAUGAAUCUCUGGAGAAGGAGAGUUGGCUCUGCAGAGAUGGAUCAUCGUGUGUGUCACCCUUGCAAUGUGUUCCUGACAGCCCAUGGAAGCGGGCUAGUGGAUUCAGCUCCAGCAGUA2000000006ACUGUUGGUUGGGAUGG2000000006ACAACCCAGAAAUGGGGCAUGUGAGGAAGAGAAAAUGAAAGUGGAUAGCCUGUUACCGAAAACUGCUGG2000000006ACUAAG2000000006ACACUUGUAAGCCUGUCAAUCUCAGUGGCCAACAGACAUGAAAAAAAUUUCCAACAUCAUUAAUUAUCAGAGAAAUGCAAAUAAAAACAACAAUGAAAUACCAUCUCAGACCAGUCAUAAUAGCUAAUAUGAAAAAAGUUAAACAAAAAACAGCUGCUGGGUGGGAAGUGAAGAAAAGGGAACACAUACAUGGGUGGUGGAAAUGUAAAUUAGUUCAGCACUGUGCAAAGCAGUUUAGAGAAUUCUCAAAGAACUUGAAACAGAGCUACUGUUUGACCCAGCAAUCCCAUCAUUAGGUAUAUAGCCAAAGUAAAAUAAAUCAUUCUACCAAAAAAUGCACAUGCACUCAUGCCUCUUGCCACACUAUUCACAACAGCAAAGAUAUGGAAUCAAUCUAGGUGCCAAUCAAUGAUGUAUUAGAUGAAUAAAAUGGUAUGUAUGCAAUAUAAAAUCAUAAAAUACCACACAUUCAUAAAAAAAAGUGUGGUGGCUCACACCUAUAAUCCCAGCACUUUGGGAGGCUGAGGCAGACAGAUCAUGAGGUCAGGAGAUCAAGAUCAUCCUGGCCAAUAUAGUGAAACCCCCUCUCUGCUAAAAAUACAAAAUUUAGCUGGGCAUAGUGGCACAUGCCUGUAAUCCCAGCUACCCGGGAGGCUGAGGCAGGAGAAUCACUUGAACCAGGGACUUAGAGGUUGCAGUAAGCUGAGAUCGCGUCACUGCACUCCUGCCUGGUGAGAGAGUGAGACUCUGUCACAAAAGAAACAAAAUCAUGUCCUUUGCAGCAACAUGGAUGCAGCUGGAGGUCAUAGUCGUAAACAAGUUAACACAGAAAAAGGAAACAAAAUAUCACAUGUUCUCACUUGAAAGUGAGUGCUAAAGGUUGAGCACAUGUGG2000000006ACAUGACCAUGGAAACAAUAGGCACUGUGA2000000006ACUGCUGGAGUGGGGAGGGAGAGAGAGGUGCAUGGGUUGAAAG2000000006ACUGACUAUUGGGUAUUAUGCUAACUCCCUGGGUGAGGGGAUCCAUACCCCAAACCUCAGCAUCACACAAUAUGCCCAUGUAAAAAAACUUGCAUAUGUACCCCCUGUACCUGAAAUAAAAGUUGAAAUUUUAAAAAUAAUAUUAAAAUUAUAAUUAAAUAAUUUUUCUUCAAUUUUUUGAAUAGUUUAACAAUAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	5	575	592	661	667	1561	1591	1634
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	14:106482439:+	14:106494334:+	14:106494351:+	14:106494420:+	14:106494426:+	14:106495320:+	14:106495350:+	14:106495393:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	KRfQJWH4K5KH VL7zkHvkfkoB WdHxkJGRmFxn	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn dknfVe6BK8aP	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn dknfVe6BK8aP	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn dknfVe6BK8aP	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn dknfVe6BK8aP	3TeAZFYFxgvp 6UuHp6YApVKv Ap2q43bQLNek jNkxUQNx8GRd NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB WdHxkJGRmFxn dknfVe6BK8aP	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek jNkxUQNx8GRd NjZ8bGGJsNSR QmcpiJ88DBDn UN3tNpbCPHYf VL7zkHvkfkoB WdHxkJGRmFxn dknfVe6BK8aP	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB WdHxkJGRmFxn dknfVe6BK8aP