General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000556683
Gene ID:	ENSG00000139921
Gene Name:	TMX1
Sequence (UNICHARACTER ENCODING)	GGGAGCUGCGACCGCGCUCCCUGUGAGGUGGGCAAGCGGCGAAAUGGCGCCCUCCGGGAGUCUUGCAGUUCCCCUGGCAGUCCUGGUGCUGUUGCUUUGGGGUGCUCCCUGGACGCACGGGCGGCGGAGCAACGUUCGCGUCAUCACGGACGAGAACUGGAGAGAACUGCUGGAAGGAGACUGGAUGAUAGAAUUUUAUGCCCCGUGGUGCCCUGCUUGUCAAAAUCUUCAACCGGAAUGGGAAAGUUUUGCUGAAUGGGGAGAAGAUCUUGAGGUUAAUAUUGCGAAAGUAGAUGUCACAGAGCAGCCAGGACUGAGUGGACGGUUUAUCAUAACUGCUCUUCCUACUAUUUAUCAGUAAGUAUUUGAAGAUUCUAAAUUAUGGAGAAGGAUGCAUUAUAGUGUAAUCAGAAGUAGUAGGCCUCUGGCUUGGAUCAUGCUGGAAGAGCUGAGUUGUAAAGAUGGUGAAUUUAGGCGCUAUCAGGGUCCAAGGACUAAGAAGGACUUCAUAAACUPUAUAAGUGAUAAAGAGUGGAAGAGUAUUGAGCCCGUUUCAUCAUGGUUUGGUCCAGGUUCUGUUCUGAUGAGUAGUAUGUCAGCACUCUUUCAGCUAUCUAUGUGGAUCAGGACUUGCCAUAЖCUACUPUAUUGAAGACCUUGGAUUGCCAGUGUGGGGAUCAUAUACUGUUUUUGCUPUAGCAACUCUGUUUUCCGGACUGUUAUUAGGACUCUGUAUGAUAUUUGUGGCAGAUUGCCUUUGUCCUUCAAAAAGGCGCAGACCACAGCCGUACCCAUACCCUUCAAAAAAAUUAUUAUCAGAAUCUGCACAACCUUUGAAAAAAGUGGAGGAGGAACAAGAGGCGGAUGAAGAAGAUGUUUCAGAAGAAGAAGCUGAAAGUAAAGAAGGAACAAACAAAGЖCUUUCCACAGAAUGCCAPAAGЖCAACGCUCUCUGGGUCCAUCAUUGGCCACAGAUAAAUCCUAGUUAAAUUUUAUAGUUAUCUUAAUAUUAUGAUUUUGAUAAAAACAGAAGAUUGAUCAUUUUGUUUGGUUUGAAGUGAЖCUGUGACUUUUUUGAAUAUUGCAGGGUUCAGUCUAGAUUGUCAUUAAAUUGAAGAGUCUACAUUCAGAACAUAAAAGCACUAGGUAUACЖAGUUUGAAAUAUGAUUUAAGCACAGUAUGAUGGUUUЖAAUAGUUCUCUAAUUUUUGAAAAAUCGUGCCAAGCAAUAAGAUUUAUGUAUAUUUGUUUAAUAAUAACCUAUUUCAAGUCUGAGUUUUGAAAAUUUACAUUUCCCAAGUAUUGCAUUAUUGAGGUAUUUAAGAAGAUUAUUUUAGAGAAAAAUAUUUCUCAUUUGAUAUAAUUUUUCUCUGUUUCACUGUGUGAAAAAAAGAAGAUAUUUCCCAUAAAUGGGAAGUUUGCCCAUUGUCUCAAGAAAUGUGUAUUUCAGUGACAAUUUCGUGGUCUUUUUAGAGGUAUAUUCCAAAAUUUCCUUGUAUUUUUAGGUUAUGCAACUAAUAAAAACUACCUUACAUUAAUUAAUUACЖGUUUUCUACACAUGGUAAUACAGGAUAUGCUACUGAUUUAGGAAGUUUUUAAGUUCAUGGUAUUCUCUUGAUUCCAACAAAGUUUGAUUUUCUCUUGUAUUUUUCUUACUUACUAUGGGUUACAUUUUUUAUUUUUCAAAUUGGAUGAUAAUUUCUUGGAAACAUUUUUUAUGUUUUAGUAAЖCAGUAUUUUUUUGUUGUUUCAAACUGAAGUUUACUGAGAGAUCCAUCAAAUUGAACAAUCUGUUGUAAUUUAAAAUUUUGGCCACUUUUUUCAGAUUUUACAUCAUUCUUGCUGAACUUCAACUUGAAAUUGUUUUUUUUUUUUUUUCUUUUUGGAUGUGAAGGUGAACAUUCCUGAUUUUUGUCUGAUGUGAAAAAGCCUUGGUAUUUUACAUUUUGAAAAUUCAAAGAAGCUUAAUAUAAAAGUUUGCAUUCUACUCAGGAAAAAGCAUCUUCUUGUAUAUGUCUUAAAUGUAUUUUUGUCCUCAUAUACAGAAAGUUCUUAAUUGAUUUUACAGUCUGUAAUGCUUGAUGUUUUAAAAUAAUAACAUUUUUAUAUUUUUUAAAAGЖCAAA
Sequence (SHORT NAMES ENCODING)	GGGAGCUGCGACCGCGCUCCCUGUGAGGUGGGCAAGCGGCGAAAUGGCGCCCUCCGGGAGUCUUGCAGUUCCCCUGGCAGUCCUGGUGCUGUUGCUUUGGGGUGCUCCCUGGACGCACGGGCGGCGGAGCAACGUUCGCGUCAUCACGGACGAGAACUGGAGAGAACUGCUGGAAGGAGACUGGAUGAUAGAAUUUUAUGCCCCGUGGUGCCCUGCUUGUCAAAAUCUUCAACCGGAAUGGGAAAGUUUUGCUGAAUGGGGAGAAGAUCUUGAGGUUAAUAUUGCGAAAGUAGAUGUCACAGAGCAGCCAGGACUGAGUGGACGGUUUAUCAUAACUGCUCUUCCUACUAUUUAUCAGUAAGUAUUUGAAGAUUCUAAAUUAUGGAGAAGGAUGCAUUAUAGUGUAAUCAGAAGUAGUAGGCCUCUGGCUUGGAUCAUGCUGGAAGAGCUGAGUUGUAAAGAUGGUGAAUUUAGGCGCUAUCAGGGUCCAAGGACUAAGAAGGACUUCAUAAACUYUAUAAGUGAUAAAGAGUGGAAGAGUAUUGAGCCCGUUUCAUCAUGGUUUGGUCCAGGUUCUGUUCUGAUGAGUAGUAUGUCAGCACUCUUUCAGCUAUCUAUGUGGAUCAGGACUUGCCAUAm6ACUACUYUAUUGAAGACCUUGGAUUGCCAGUGUGGGGAUCAUAUACUGUUUUUGCUYUAGCAACUCUGUUUUCCGGACUGUUAUUAGGACUCUGUAUGAUAUUUGUGGCAGAUUGCCUUUGUCCUUCAAAAAGGCGCAGACCACAGCCGUACCCAUACCCUUCAAAAAAAUUAUUAUCAGAAUCUGCACAACCUUUGAAAAAAGUGGAGGAGGAACAAGAGGCGGAUGAAGAAGAUGUUUCAGAAGAAGAAGCUGAAAGUAAAGAAGGAACAAACAAAGm6ACUUUCCACAGAAUGCCAYAAGm6ACAACGCUCUCUGGGUCCAUCAUUGGCCACAGAUAAAUCCUAGUUAAAUUUUAUAGUUAUCUUAAUAUUAUGAUUUUGAUAAAAACAGAAGAUUGAUCAUUUUGUUUGGUUUGAAGUGAm6ACUGUGACUUUUUUGAAUAUUGCAGGGUUCAGUCUAGAUUGUCAUUAAAUUGAAGAGUCUACAUUCAGAACAUAAAAGCACUAGGUAUACm6AAGUUUGAAAUAUGAUUUAAGCACAGUAUGAUGGUUUm6AAAUAGUUCUCUAAUUUUUGAAAAAUCGUGCCAAGCAAUAAGAUUUAUGUAUAUUUGUUUAAUAAUAACCUAUUUCAAGUCUGAGUUUUGAAAAUUUACAUUUCCCAAGUAUUGCAUUAUUGAGGUAUUUAAGAAGAUUAUUUUAGAGAAAAAUAUUUCUCAUUUGAUAUAAUUUUUCUCUGUUUCACUGUGUGAAAAAAAGAAGAUAUUUCCCAUAAAUGGGAAGUUUGCCCAUUGUCUCAAGAAAUGUGUAUUUCAGUGACAAUUUCGUGGUCUUUUUAGAGGUAUAUUCCAAAAUUUCCUUGUAUUUUUAGGUUAUGCAACUAAUAAAAACUACCUUACAUUAAUUAAUUACm6AGUUUUCUACACAUGGUAAUACAGGAUAUGCUACUGAUUUAGGAAGUUUUUAAGUUCAUGGUAUUCUCUUGAUUCCAACAAAGUUUGAUUUUCUCUUGUAUUUUUCUUACUUACUAUGGGUUACAUUUUUUAUUUUUCAAAUUGGAUGAUAAUUUCUUGGAAACAUUUUUUAUGUUUUAGUAAm6ACAGUAUUUUUUUGUUGUUUCAAACUGAAGUUUACUGAGAGAUCCAUCAAAUUGAACAAUCUGUUGUAAUUUAAAAUUUUGGCCACUUUUUUCAGAUUUUACAUCAUUCUUGCUGAACUUCAACUUGAAAUUGUUUUUUUUUUUUUUUCUUUUUGGAUGUGAAGGUGAACAUUCCUGAUUUUUGUCUGAUGUGAAAAAGCCUUGGUAUUUUACAUUUUGAAAAUUCAAAGAAGCUUAAUAUAAAAGUUUGCAUUCUACUCAGGAAAAAGCAUCUUCUUGUAUAUGUCUUAAAUGUAUUUUUGUCCUCAUAUACAGAAAGUUCUUAAUUGAUUUUACAGUCUGUAAUGCUUGAUGUUUUAAAAUAAUAACAUUUUUAUAUUUUUUAAAAGm6ACAAA
Sequence (MODOMICS CODE ENCODING)	GGGAGCUGCGACCGCGCUCCCUGUGAGGUGGGCAAGCGGCGAAAUGGCGCCCUCCGGGAGUCUUGCAGUUCCCCUGGCAGUCCUGGUGCUGUUGCUUUGGGGUGCUCCCUGGACGCACGGGCGGCGGAGCAACGUUCGCGUCAUCACGGACGAGAACUGGAGAGAACUGCUGGAAGGAGACUGGAUGAUAGAAUUUUAUGCCCCGUGGUGCCCUGCUUGUCAAAAUCUUCAACCGGAAUGGGAAAGUUUUGCUGAAUGGGGAGAAGAUCUUGAGGUUAAUAUUGCGAAAGUAGAUGUCACAGAGCAGCCAGGACUGAGUGGACGGUUUAUCAUAACUGCUCUUCCUACUAUUUAUCAGUAAGUAUUUGAAGAUUCUAAAUUAUGGAGAAGGAUGCAUUAUAGUGUAAUCAGAAGUAGUAGGCCUCUGGCUUGGAUCAUGCUGGAAGAGCUGAGUUGUAAAGAUGGUGAAUUUAGGCGCUAUCAGGGUCCAAGGACUAAGAAGGACUUCAUAAACU2000000009UUAUAAGUGAUAAAGAGUGGAAGAGUAUUGAGCCCGUUUCAUCAUGGUUUGGUCCAGGUUCUGUUCUGAUGAGUAGUAUGUCAGCACUCUUUCAGCUAUCUAUGUGGAUCAGGACUUGCCAUA2000000006ACUACU2000000009UUAUUGAAGACCUUGGAUUGCCAGUGUGGGGAUCAUAUACUGUUUUUGCU2000000009UUAGCAACUCUGUUUUCCGGACUGUUAUUAGGACUCUGUAUGAUAUUUGUGGCAGAUUGCCUUUGUCCUUCAAAAAGGCGCAGACCACAGCCGUACCCAUACCCUUCAAAAAAAUUAUUAUCAGAAUCUGCACAACCUUUGAAAAAAGUGGAGGAGGAACAAGAGGCGGAUGAAGAAGAUGUUUCAGAAGAAGAAGCUGAAAGUAAAGAAGGAACAAACAAAG2000000006ACUUUCCACAGAAUGCCA2000000009UAAG2000000006ACAACGCUCUCUGGGUCCAUCAUUGGCCACAGAUAAAUCCUAGUUAAAUUUUAUAGUUAUCUUAAUAUUAUGAUUUUGAUAAAAACAGAAGAUUGAUCAUUUUGUUUGGUUUGAAGUGA2000000006ACUGUGACUUUUUUGAAUAUUGCAGGGUUCAGUCUAGAUUGUCAUUAAAUUGAAGAGUCUACAUUCAGAACAUAAAAGCACUAGGUAUAC2000000006AAGUUUGAAAUAUGAUUUAAGCACAGUAUGAUGGUUU2000000006AAAUAGUUCUCUAAUUUUUGAAAAAUCGUGCCAAGCAAUAAGAUUUAUGUAUAUUUGUUUAAUAAUAACCUAUUUCAAGUCUGAGUUUUGAAAAUUUACAUUUCCCAAGUAUUGCAUUAUUGAGGUAUUUAAGAAGAUUAUUUUAGAGAAAAAUAUUUCUCAUUUGAUAUAAUUUUUCUCUGUUUCACUGUGUGAAAAAAAGAAGAUAUUUCCCAUAAAUGGGAAGUUUGCCCAUUGUCUCAAGAAAUGUGUAUUUCAGUGACAAUUUCGUGGUCUUUUUAGAGGUAUAUUCCAAAAUUUCCUUGUAUUUUUAGGUUAUGCAACUAAUAAAAACUACCUUACAUUAAUUAAUUAC2000000006AGUUUUCUACACAUGGUAAUACAGGAUAUGCUACUGAUUUAGGAAGUUUUUAAGUUCAUGGUAUUCUCUUGAUUCCAACAAAGUUUGAUUUUCUCUUGUAUUUUUCUUACUUACUAUGGGUUACAUUUUUUAUUUUUCAAAUUGGAUGAUAAUUUCUUGGAAACAUUUUUUAUGUUUUAGUAA2000000006ACAGUAUUUUUUUGUUGUUUCAAACUGAAGUUUACUGAGAGAUCCAUCAAAUUGAACAAUCUGUUGUAAUUUAAAAUUUUGGCCACUUUUUUCAGAUUUUACAUCAUUCUUGCUGAACUUCAACUUGAAAUUGUUUUUUUUUUUUUUUCUUUUUGGAUGUGAAGGUGAACAUUCCUGAUUUUUGUCUGAUGUGAAAAAGCCUUGGUAUUUUACAUUUUGAAAAUUCAAAGAAGCUUAAUAUAAAAGUUUGCAUUCUACUCAGGAAAAAGCAUCUUCUUGUAUAUGUCUUAAAUGUAUUUUUGUCCUCAUAUACAGAAAGUUCUUAAUUGAUUUUACAGUCUGUAAUGCUUGAUGUUUUAAAAUAAUAACAUUUUUAUAUUUUUUAAAAG2000000006ACAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	516	639	645	695	918	936	940	1059	1149	1186	1541	1724	2113
Modification Positions	Y	m6A	Y	Y	m6A	Y	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	14:51247154:+	14:51249478:+	14:51249484:+	14:51249534:+	14:51254455:+	14:51254473:+	14:51254477:+	14:51254596:+	14:51254686:+	14:51254723:+	14:51255078:+	14:51255261:+	14:51255650:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U ArijeGVTwYBw nfCHyrYzE6fB BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G dA7YoLwHrzgR ksEP666umrV9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	ArijeGVTwYBw KTLz8piFYdwC BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se ArijeGVTwYBw KTLz8piFYdwC WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	8cMbzB4aD5Se KTLz8piFYdwC BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8