General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000392990
Gene ID:	ENSG00000090060
Gene Name:	PAPOLA
Sequence (UNICHARACTER ENCODING)	GGGGAAGUGACUGGGCGGUGCCGGCGCCGGAGACGAUGCCGUUUCCAGUUACAACACAGGGAUCACAACAAACACAACCGCCACAGAAGCACUAUGGCAUUACUUCUCCUAUCAGCUUAGCAGCCCCCAAGGAGACUGACUGCGUACUUACACAGAAACUAAUUGAGACAUUGAAACCCUUUGGGGUUUUUGAAGAGGAAGAGGAACUGCAGCGCAGGAUUUUAAUUUUGGGAAAACUAAAUAACCUGGUAAAAGAGUGGAUACGAGAAAUCAGUGAAAGCAAGAAUCUUCCACAAUCUGUAAUUGAAAAUGUUGGAGGAAAAAUUUUUACAUUUGGAUCUUACAGAUUAGGAGUGCAUACAAAAGGUGCUGAUAUUGAUGCGUUGUGUGUUGCACCAAGACAUGUUGAUCGAAGUGACUUUUUCACCUCAUUCUAUGAUAAGUUGAAAUUACAGGAAGAAGUAAAAGAUUUAAGAGCUGUUGAAGAGGCAUUCGUACCAGUUAUUAAACUCUGUUUUGAUGGGAUAGAGAUUGAUAUUUUGUUUGCAAGAUUAGCACUGCAGACAAUUCCUGAAGAUPUGGAUCUACGAGAUGACAGUCUGCUAAAAAAUUUAGAUAUAAGAUGUAUAAGAAGUCUUAACGGUUGCAGGGUAACCGAUGAAAUUUUACAUCUAGUACCAAACAUUGACAACUUCAGGUUAACUCUGAGAGCUAUCAAACUAUGGGCCAAACGCCACAACAUCUAUUCCAAUAUAUUAGGUUUCCUCGGUGGUGUUUCCUGGGCUAUGCUAGUAGCAAGAACUUGCCAGCUPUAUCCAAAUGCAAUAGCAUCAACUCUUGUACAUAAAUUUUUCUUGGUAUUUUCUAAAUGGGAAUGGCCAAAUCCAGUGCUAUUGAAACAGCCUGAAGAAUGCAAUCUUAAUUUGCCUGUAUGGGACCCAAGGGUAAACCCCAGUGAUAGGUACCAUCUUAUGCCUAUAAUUACACCAGCAUACCCACAACAGAACUCCACGUACAAUGUGUCCGUUUCAACACGGAUGGUCAUGGUUGAGGAGUUUAAЖCAAGGUCUUGCUAUCACAGAUGAAAUUUUGCUGAGUAAGGCAGAGUGGUCCAAACUUUUUGAAGCUCCAAACUUCUUUCAAAAGUACAAGCAUUAUAUUGUACUUCUAGCAAGUGCACCAACAGAAAAACAACGCCUGGAAUGGGUGGGCUUGGUGGAAUCAAAAAUCCGAAUCCUGGUUGGAAGCUUGGAGAAGAAUGAAUUUAUUACACUGGCUCAUGUGAAUCCCCAGUCAUUUCCAGCACCCAAAGAAAAUCCCGACAAGGAAGAAUUUCGCACGAUGUGGGUGAUUGGGUUAGUGUUUAAAAAAACAGAAAACUCUGAAAACCUCAGUGUUGAUCUCACCUAUGAUAUUCAGUCUUUCACAGAUACAGUUUAUAGGCAAGCAAUAAЖCAGCAAGAUGUUUGAGGUGGAUAUGAAAAUUGCUGCAAUGCAUGUAAAAAGAAAGCAACUCCAUCAACUACUACCUAAUCAUGUGCUUCAGAAAAAGAAAAAGCAUUCAACAGAAGGUGUCAAAUUGACAGCUCUCAAUGACAGCAGCCUCGACUUGUCUAUGGACAGUGAUAACAGCAUGUCUGUGCCUUCACCUACUAGUGCUACGAAGACCAGUCCAUUGAACAGUUCUGGCAGCUCUCAGGGCAGAAACAGUCCUGCUCCAGCUGUAЖCAGCAGCAUCUGUGACCAACAUACAGGCUACUGAAGUUUCUGUGCCACAAGUAAAUUCCAGUGAAAGCUCAGGGGGUACAUCGAGUGAAAGCAUUCCUCAAЖCUGCCACACAACCAGCCAUUUCUCCACCACCAAAGCCUACGGUCUCCAGAGUUGUUUCUUCAACACGUCUGGUAAACCCACCACCUAGAUCUUCAGGAAAUGCAGCAACUUCAGGAAAUGCAGCAACAAAAAUACCUACUCCUAUAGUAGGAGUCAAGAGGACAPCCUCACCUCAUAAAGAAGAGAGUCCCAAGAAAACCAAAACAGAAGAGGAACAACUUGAUACAGAGACAAGUACAACUCAAUCAGAAACUAUUCAGACAGCGGCUUCUCUGUUGGCCUCUCAGAAAACAPCCAGUACЖGACCUUUCUGAUAUCCCUGCUCUCCCUGCAAAUCCUAUUCCUGUUAUCAAGAAUUCAAUAAAЖCUGAGAUUGAAUCGGUAAAAACAACCUCAGGGGUCCAUAAЖCAAUAUCUGCCAACUCAACCUGUUGUCUUCAAAUGCUAAAAAAGGAGAAUGGAGGGUACAAGЖCUAGACAUGACUGAAAUGGAUUUGGGUUUUUUGGUGACCUCCCUUACUGGGCUAAUCAGCACUUGAUCGGAAGUCCAGGUUAGUAUGUGAAGCCAGGAGUACUAUUAUUAUUGUGUUAGCAACAGUUGCAUUAACUAUUUCAAAAAUUACUGCCUPUAAAAAAAACAACCUCAAGCUAUAUUUGUAUUCAUAAUUGACAUCUGGAUUGGGUUUAUGUUUGAUGCAUUGUUUGGAAAAUUUGCAAUACAAACUGGCAUAAGAAUUACUUAUUCUGAUGAUGCACUUUUAUGUA
Sequence (SHORT NAMES ENCODING)	GGGGAAGUGACUGGGCGGUGCCGGCGCCGGAGACGAUGCCGUUUCCAGUUACAACACAGGGAUCACAACAAACACAACCGCCACAGAAGCACUAUGGCAUUACUUCUCCUAUCAGCUUAGCAGCCCCCAAGGAGACUGACUGCGUACUUACACAGAAACUAAUUGAGACAUUGAAACCCUUUGGGGUUUUUGAAGAGGAAGAGGAACUGCAGCGCAGGAUUUUAAUUUUGGGAAAACUAAAUAACCUGGUAAAAGAGUGGAUACGAGAAAUCAGUGAAAGCAAGAAUCUUCCACAAUCUGUAAUUGAAAAUGUUGGAGGAAAAAUUUUUACAUUUGGAUCUUACAGAUUAGGAGUGCAUACAAAAGGUGCUGAUAUUGAUGCGUUGUGUGUUGCACCAAGACAUGUUGAUCGAAGUGACUUUUUCACCUCAUUCUAUGAUAAGUUGAAAUUACAGGAAGAAGUAAAAGAUUUAAGAGCUGUUGAAGAGGCAUUCGUACCAGUUAUUAAACUCUGUUUUGAUGGGAUAGAGAUUGAUAUUUUGUUUGCAAGAUUAGCACUGCAGACAAUUCCUGAAGAUYUGGAUCUACGAGAUGACAGUCUGCUAAAAAAUUUAGAUAUAAGAUGUAUAAGAAGUCUUAACGGUUGCAGGGUAACCGAUGAAAUUUUACAUCUAGUACCAAACAUUGACAACUUCAGGUUAACUCUGAGAGCUAUCAAACUAUGGGCCAAACGCCACAACAUCUAUUCCAAUAUAUUAGGUUUCCUCGGUGGUGUUUCCUGGGCUAUGCUAGUAGCAAGAACUUGCCAGCUYUAUCCAAAUGCAAUAGCAUCAACUCUUGUACAUAAAUUUUUCUUGGUAUUUUCUAAAUGGGAAUGGCCAAAUCCAGUGCUAUUGAAACAGCCUGAAGAAUGCAAUCUUAAUUUGCCUGUAUGGGACCCAAGGGUAAACCCCAGUGAUAGGUACCAUCUUAUGCCUAUAAUUACACCAGCAUACCCACAACAGAACUCCACGUACAAUGUGUCCGUUUCAACACGGAUGGUCAUGGUUGAGGAGUUUAAm6ACAAGGUCUUGCUAUCACAGAUGAAAUUUUGCUGAGUAAGGCAGAGUGGUCCAAACUUUUUGAAGCUCCAAACUUCUUUCAAAAGUACAAGCAUUAUAUUGUACUUCUAGCAAGUGCACCAACAGAAAAACAACGCCUGGAAUGGGUGGGCUUGGUGGAAUCAAAAAUCCGAAUCCUGGUUGGAAGCUUGGAGAAGAAUGAAUUUAUUACACUGGCUCAUGUGAAUCCCCAGUCAUUUCCAGCACCCAAAGAAAAUCCCGACAAGGAAGAAUUUCGCACGAUGUGGGUGAUUGGGUUAGUGUUUAAAAAAACAGAAAACUCUGAAAACCUCAGUGUUGAUCUCACCUAUGAUAUUCAGUCUUUCACAGAUACAGUUUAUAGGCAAGCAAUAAm6ACAGCAAGAUGUUUGAGGUGGAUAUGAAAAUUGCUGCAAUGCAUGUAAAAAGAAAGCAACUCCAUCAACUACUACCUAAUCAUGUGCUUCAGAAAAAGAAAAAGCAUUCAACAGAAGGUGUCAAAUUGACAGCUCUCAAUGACAGCAGCCUCGACUUGUCUAUGGACAGUGAUAACAGCAUGUCUGUGCCUUCACCUACUAGUGCUACGAAGACCAGUCCAUUGAACAGUUCUGGCAGCUCUCAGGGCAGAAACAGUCCUGCUCCAGCUGUAm6ACAGCAGCAUCUGUGACCAACAUACAGGCUACUGAAGUUUCUGUGCCACAAGUAAAUUCCAGUGAAAGCUCAGGGGGUACAUCGAGUGAAAGCAUUCCUCAAm6ACUGCCACACAACCAGCCAUUUCUCCACCACCAAAGCCUACGGUCUCCAGAGUUGUUUCUUCAACACGUCUGGUAAACCCACCACCUAGAUCUUCAGGAAAUGCAGCAACUUCAGGAAAUGCAGCAACAAAAAUACCUACUCCUAUAGUAGGAGUCAAGAGGACAYCCUCACCUCAUAAAGAAGAGAGUCCCAAGAAAACCAAAACAGAAGAGGAACAACUUGAUACAGAGACAAGUACAACUCAAUCAGAAACUAUUCAGACAGCGGCUUCUCUGUUGGCCUCUCAGAAAACAYCCAGUACm6AGACCUUUCUGAUAUCCCUGCUCUCCCUGCAAAUCCUAUUCCUGUUAUCAAGAAUUCAAUAAAm6ACUGAGAUUGAAUCGGUAAAAACAACCUCAGGGGUCCAUAAm6ACAAUAUCUGCCAACUCAACCUGUUGUCUUCAAAUGCUAAAAAAGGAGAAUGGAGGGUACAAGm6ACUAGACAUGACUGAAAUGGAUUUGGGUUUUUUGGUGACCUCCCUUACUGGGCUAAUCAGCACUUGAUCGGAAGUCCAGGUUAGUAUGUGAAGCCAGGAGUACUAUUAUUAUUGUGUUAGCAACAGUUGCAUUAACUAUUUCAAAAAUUACUGCCUYUAAAAAAAACAACCUCAAGCUAUAUUUGUAUUCAUAAUUGACAUCUGGAUUGGGUUUAUGUUUGAUGCAUUGUUUGGAAAAUUUGCAAUACAAACUGGCAUAAGAAUUACUUAUUCUGAUGAUGCACUUUUAUGUA
Sequence (MODOMICS CODE ENCODING)	GGGGAAGUGACUGGGCGGUGCCGGCGCCGGAGACGAUGCCGUUUCCAGUUACAACACAGGGAUCACAACAAACACAACCGCCACAGAAGCACUAUGGCAUUACUUCUCCUAUCAGCUUAGCAGCCCCCAAGGAGACUGACUGCGUACUUACACAGAAACUAAUUGAGACAUUGAAACCCUUUGGGGUUUUUGAAGAGGAAGAGGAACUGCAGCGCAGGAUUUUAAUUUUGGGAAAACUAAAUAACCUGGUAAAAGAGUGGAUACGAGAAAUCAGUGAAAGCAAGAAUCUUCCACAAUCUGUAAUUGAAAAUGUUGGAGGAAAAAUUUUUACAUUUGGAUCUUACAGAUUAGGAGUGCAUACAAAAGGUGCUGAUAUUGAUGCGUUGUGUGUUGCACCAAGACAUGUUGAUCGAAGUGACUUUUUCACCUCAUUCUAUGAUAAGUUGAAAUUACAGGAAGAAGUAAAAGAUUUAAGAGCUGUUGAAGAGGCAUUCGUACCAGUUAUUAAACUCUGUUUUGAUGGGAUAGAGAUUGAUAUUUUGUUUGCAAGAUUAGCACUGCAGACAAUUCCUGAAGAU2000000009UUGGAUCUACGAGAUGACAGUCUGCUAAAAAAUUUAGAUAUAAGAUGUAUAAGAAGUCUUAACGGUUGCAGGGUAACCGAUGAAAUUUUACAUCUAGUACCAAACAUUGACAACUUCAGGUUAACUCUGAGAGCUAUCAAACUAUGGGCCAAACGCCACAACAUCUAUUCCAAUAUAUUAGGUUUCCUCGGUGGUGUUUCCUGGGCUAUGCUAGUAGCAAGAACUUGCCAGCU2000000009UUAUCCAAAUGCAAUAGCAUCAACUCUUGUACAUAAAUUUUUCUUGGUAUUUUCUAAAUGGGAAUGGCCAAAUCCAGUGCUAUUGAAACAGCCUGAAGAAUGCAAUCUUAAUUUGCCUGUAUGGGACCCAAGGGUAAACCCCAGUGAUAGGUACCAUCUUAUGCCUAUAAUUACACCAGCAUACCCACAACAGAACUCCACGUACAAUGUGUCCGUUUCAACACGGAUGGUCAUGGUUGAGGAGUUUAA2000000006ACAAGGUCUUGCUAUCACAGAUGAAAUUUUGCUGAGUAAGGCAGAGUGGUCCAAACUUUUUGAAGCUCCAAACUUCUUUCAAAAGUACAAGCAUUAUAUUGUACUUCUAGCAAGUGCACCAACAGAAAAACAACGCCUGGAAUGGGUGGGCUUGGUGGAAUCAAAAAUCCGAAUCCUGGUUGGAAGCUUGGAGAAGAAUGAAUUUAUUACACUGGCUCAUGUGAAUCCCCAGUCAUUUCCAGCACCCAAAGAAAAUCCCGACAAGGAAGAAUUUCGCACGAUGUGGGUGAUUGGGUUAGUGUUUAAAAAAACAGAAAACUCUGAAAACCUCAGUGUUGAUCUCACCUAUGAUAUUCAGUCUUUCACAGAUACAGUUUAUAGGCAAGCAAUAA2000000006ACAGCAAGAUGUUUGAGGUGGAUAUGAAAAUUGCUGCAAUGCAUGUAAAAAGAAAGCAACUCCAUCAACUACUACCUAAUCAUGUGCUUCAGAAAAAGAAAAAGCAUUCAACAGAAGGUGUCAAAUUGACAGCUCUCAAUGACAGCAGCCUCGACUUGUCUAUGGACAGUGAUAACAGCAUGUCUGUGCCUUCACCUACUAGUGCUACGAAGACCAGUCCAUUGAACAGUUCUGGCAGCUCUCAGGGCAGAAACAGUCCUGCUCCAGCUGUA2000000006ACAGCAGCAUCUGUGACCAACAUACAGGCUACUGAAGUUUCUGUGCCACAAGUAAAUUCCAGUGAAAGCUCAGGGGGUACAUCGAGUGAAAGCAUUCCUCAA2000000006ACUGCCACACAACCAGCCAUUUCUCCACCACCAAAGCCUACGGUCUCCAGAGUUGUUUCUUCAACACGUCUGGUAAACCCACCACCUAGAUCUUCAGGAAAUGCAGCAACUUCAGGAAAUGCAGCAACAAAAAUACCUACUCCUAUAGUAGGAGUCAAGAGGACA2000000009UCCUCACCUCAUAAAGAAGAGAGUCCCAAGAAAACCAAAACAGAAGAGGAACAACUUGAUACAGAGACAAGUACAACUCAAUCAGAAACUAUUCAGACAGCGGCUUCUCUGUUGGCCUCUCAGAAAACA2000000009UCCAGUAC2000000006AGACCUUUCUGAUAUCCCUGCUCUCCCUGCAAAUCCUAUUCCUGUUAUCAAGAAUUCAAUAAA2000000006ACUGAGAUUGAAUCGGUAAAAACAACCUCAGGGGUCCAUAA2000000006ACAAUAUCUGCCAACUCAACCUGUUGUCUUCAAAUGCUAAAAAAGGAGAAUGGAGGGUACAAG2000000006ACUAGACAUGACUGAAAUGGAUUUGGGUUUUUUGGUGACCUCCCUUACUGGGCUAAUCAGCACUUGAUCGGAAGUCCAGGUUAGUAUGUGAAGCCAGGAGUACUAUUAUUAUUGUGUUAGCAACAGUUGCAUUAACUAUUUCAAAAAUUACUGCCU2000000009UUAAAAAAAACAACCUCAAGCUAUAUUUGUAUUCAUAAUUGACAUCUGGAUUGGGUUUAUGUUUGAUGCAUUGUUUGGAAAAUUUGCAAUACAAACUGGCAUAAGAAUUACUUAUUCUGAUGAUGCACUUUUAUGUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	579	812	1061	1453	1725	1827	1992	2121	2129	2192	2233	2296	2452
Modification Positions	Y	Y	m6A	m6A	m6A	m6A	Y	Y	m6A	m6A	m6A	m6A	Y
Genomic Coordinates	14:96531523:+	14:96532590:+	14:96535995:+	14:96547815:+	14:96555872:+	14:96556201:+	14:96556366:+	14:96564961:+	14:96564969:+	14:96565032:+	14:96565073:+	14:96565136:+	14:96565292:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	ArijeGVTwYBw BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KTLz8piFYdwC BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 5aTkEfEpX8Xm 6UuHp6YApVKv gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se WiQcrNTGZHPT Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8