General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000560670
Gene ID:	ENSG00000185215
Gene Name:	TNFAIP2
Sequence (UNICHARACTER ENCODING)	GUGCGAGCGCGACACCUACAUGCUGCUGCUCUGGGUGCAGAACCUCUACCCCAAGCCAAUGUGAGGGAGUUGAUGGACCGAGCUCUGGAGCUAGAGGCACGGCGCUGGGCUGAGGAUGUGCCUCCCCAGAGGCUGGACGGCCACUGCCACAGCGAGCUGGCCAUCGACAUCAPCCAGAUCACCUCCCAGGCCCAGGCCAAGGCCGAGAGCAUCACGCUGGACUUGGGCUCACAGAUAAAGCGGGUGCUGCUGGUGGAGCUGCCUGCGUUCCUGAGGAGCUACCAGCGCGCCUPUAAUGAAUUUCUGGAGAGAGGCAAGCAGCUGACGAAUUACAGGGCCAAUGUUAUUGCCAACAUCAACAACUGCCUGUCCUUCCGGAUGUCCAUGGAGCAGAAUUGGCAGGUACCCCAGGACACCCUGAGCCUCCUGCUGGGCCCCCUGGGUGAGCUCAAGAGCCACGGCUUUGACACCCUGCUCCAGAACCUGCAUGAGGACCUGAAGCCACUGUUCAAGAGGUUCACGCACACCCGCUGGGCGGCCCCUGUGGAGACCCUGGAAAACAUCAUCGCCACUGUAGACACGAGGCUGCCUGAGUUCUCAGAGCUGCAGGGCUGUUUCCGGGAGGAGCUCAUGGAGGCCUUGCACCUGCACCUGGUGAAGGAGUACAUCAPCCAACUCAGCAAGGGGCGCCUGGUCCUCAAGACGGCCGAGCAGCAGCAGCAGCUGGCUGGGUACAPCCUGGCCAAUGCUGACACCAUCCAGCACUUCUGCACCCAGCACGGCUCCCCGGCGACCUGGCUGCAGCCUGCUCUCCCUACGCUGGCCGAGAUCAUUCGCCUGCAGGACCCCAGUGCCAUCAAGAUUGAGGUGGCCACUUAUGCCACCUGCUACCCUGACUUCAGCAAAGGCCACCUGAGCGCUAUCCUGGCCAUCAAGGGGAACCUAUCCAACAGUGAGGUCAAGCGCAUCCGGAGCAUCUUGGACGUCAGCAUGGGGGCGCAGGAGCCCUCCCGGCCCCUAUUUUCCCUUAUAAAGGUUGGUUAGCUUUUCCUGUGGCCUGACCUGCCUGUGAGUGCCCAGCAAGCCUUGGGCACACCCCGCUGGGAGCUGUUAAGAGCAGCGCUGGUUCUCGGUUCCUCCCGGGUCUCCUGUGCUCUGAUGCUACUUCUGCCUAGCCCUGGCGGAGGUGCAGGCCCUGUCAGCUGGAЖCUGGЖCAGЖCCUUGGUUUGUUUACAUGUCCGAUGGGGGCAGGAGCUCCCAUCCUGGGCAGCCAACCAGGCAACACCAAGGЖCUCUUUGUAAACGAUAGCUGAUCGUGUGCACGCAAGGAAAGAACC
Sequence (SHORT NAMES ENCODING)	GUGCGAGCGCGACACCUACAUGCUGCUGCUCUGGGUGCAGAACCUCUACCCCAAGCCAAUGUGAGGGAGUUGAUGGACCGAGCUCUGGAGCUAGAGGCACGGCGCUGGGCUGAGGAUGUGCCUCCCCAGAGGCUGGACGGCCACUGCCACAGCGAGCUGGCCAUCGACAUCAYCCAGAUCACCUCCCAGGCCCAGGCCAAGGCCGAGAGCAUCACGCUGGACUUGGGCUCACAGAUAAAGCGGGUGCUGCUGGUGGAGCUGCCUGCGUUCCUGAGGAGCUACCAGCGCGCCUYUAAUGAAUUUCUGGAGAGAGGCAAGCAGCUGACGAAUUACAGGGCCAAUGUUAUUGCCAACAUCAACAACUGCCUGUCCUUCCGGAUGUCCAUGGAGCAGAAUUGGCAGGUACCCCAGGACACCCUGAGCCUCCUGCUGGGCCCCCUGGGUGAGCUCAAGAGCCACGGCUUUGACACCCUGCUCCAGAACCUGCAUGAGGACCUGAAGCCACUGUUCAAGAGGUUCACGCACACCCGCUGGGCGGCCCCUGUGGAGACCCUGGAAAACAUCAUCGCCACUGUAGACACGAGGCUGCCUGAGUUCUCAGAGCUGCAGGGCUGUUUCCGGGAGGAGCUCAUGGAGGCCUUGCACCUGCACCUGGUGAAGGAGUACAUCAYCCAACUCAGCAAGGGGCGCCUGGUCCUCAAGACGGCCGAGCAGCAGCAGCAGCUGGCUGGGUACAYCCUGGCCAAUGCUGACACCAUCCAGCACUUCUGCACCCAGCACGGCUCCCCGGCGACCUGGCUGCAGCCUGCUCUCCCUACGCUGGCCGAGAUCAUUCGCCUGCAGGACCCCAGUGCCAUCAAGAUUGAGGUGGCCACUUAUGCCACCUGCUACCCUGACUUCAGCAAAGGCCACCUGAGCGCUAUCCUGGCCAUCAAGGGGAACCUAUCCAACAGUGAGGUCAAGCGCAUCCGGAGCAUCUUGGACGUCAGCAUGGGGGCGCAGGAGCCCUCCCGGCCCCUAUUUUCCCUUAUAAAGGUUGGUUAGCUUUUCCUGUGGCCUGACCUGCCUGUGAGUGCCCAGCAAGCCUUGGGCACACCCCGCUGGGAGCUGUUAAGAGCAGCGCUGGUUCUCGGUUCCUCCCGGGUCUCCUGUGCUCUGAUGCUACUUCUGCCUAGCCCUGGCGGAGGUGCAGGCCCUGUCAGCUGGAm6ACUGGm6ACAGm6ACCUUGGUUUGUUUACAUGUCCGAUGGGGGCAGGAGCUCCCAUCCUGGGCAGCCAACCAGGCAACACCAAGGm6ACUCUUUGUAAACGAUAGCUGAUCGUGUGCACGCAAGGAAAGAACC
Sequence (MODOMICS CODE ENCODING)	GUGCGAGCGCGACACCUACAUGCUGCUGCUCUGGGUGCAGAACCUCUACCCCAAGCCAAUGUGAGGGAGUUGAUGGACCGAGCUCUGGAGCUAGAGGCACGGCGCUGGGCUGAGGAUGUGCCUCCCCAGAGGCUGGACGGCCACUGCCACAGCGAGCUGGCCAUCGACAUCA2000000009UCCAGAUCACCUCCCAGGCCCAGGCCAAGGCCGAGAGCAUCACGCUGGACUUGGGCUCACAGAUAAAGCGGGUGCUGCUGGUGGAGCUGCCUGCGUUCCUGAGGAGCUACCAGCGCGCCU2000000009UUAAUGAAUUUCUGGAGAGAGGCAAGCAGCUGACGAAUUACAGGGCCAAUGUUAUUGCCAACAUCAACAACUGCCUGUCCUUCCGGAUGUCCAUGGAGCAGAAUUGGCAGGUACCCCAGGACACCCUGAGCCUCCUGCUGGGCCCCCUGGGUGAGCUCAAGAGCCACGGCUUUGACACCCUGCUCCAGAACCUGCAUGAGGACCUGAAGCCACUGUUCAAGAGGUUCACGCACACCCGCUGGGCGGCCCCUGUGGAGACCCUGGAAAACAUCAUCGCCACUGUAGACACGAGGCUGCCUGAGUUCUCAGAGCUGCAGGGCUGUUUCCGGGAGGAGCUCAUGGAGGCCUUGCACCUGCACCUGGUGAAGGAGUACAUCA2000000009UCCAACUCAGCAAGGGGCGCCUGGUCCUCAAGACGGCCGAGCAGCAGCAGCAGCUGGCUGGGUACA2000000009UCCUGGCCAAUGCUGACACCAUCCAGCACUUCUGCACCCAGCACGGCUCCCCGGCGACCUGGCUGCAGCCUGCUCUCCCUACGCUGGCCGAGAUCAUUCGCCUGCAGGACCCCAGUGCCAUCAAGAUUGAGGUGGCCACUUAUGCCACCUGCUACCCUGACUUCAGCAAAGGCCACCUGAGCGCUAUCCUGGCCAUCAAGGGGAACCUAUCCAACAGUGAGGUCAAGCGCAUCCGGAGCAUCUUGGACGUCAGCAUGGGGGCGCAGGAGCCCUCCCGGCCCCUAUUUUCCCUUAUAAAGGUUGGUUAGCUUUUCCUGUGGCCUGACCUGCCUGUGAGUGCCCAGCAAGCCUUGGGCACACCCCGCUGGGAGCUGUUAAGAGCAGCGCUGGUUCUCGGUUCCUCCCGGGUCUCCUGUGCUCUGAUGCUACUUCUGCCUAGCCCUGGCGGAGGUGCAGGCCCUGUCAGCUGGA2000000006ACUGG2000000006ACAG2000000006ACCUUGGUUUGUUUACAUGUCCGAUGGGGGCAGGAGCUCCCAUCCUGGGCAGCCAACCAGGCAACACCAAGG2000000006ACUCUUUGUAAACGAUAGCUGAUCGUGUGCACGCAAGGAAAGAACC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	173	293	671	737	1208	1213	1217	1289
Modification Positions	Y	Y	Y	Y	m6A	m6A	m6A	m6A
Genomic Coordinates	14:103130120:+	14:103131066:+	14:103133408:+	14:103133474:+	14:103135524:+	14:103135529:+	14:103135533:+	14:103135605:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	bXBqJigD9oV3 f6YSioLdAWpr	bXBqJigD9oV3 f6YSioLdAWpr	bXBqJigD9oV3 f6YSioLdAWpr	bXBqJigD9oV3 f6YSioLdAWpr	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G bXBqJigD9oV3	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn aJksAshEgQ8U 93arJtwJmuS9 ArijeGVTwYBw KTLz8piFYdwC KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G bXBqJigD9oV3	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB WdHxkJGRmFxn aJksAshEgQ8U KENzb7mwdBd9 KjeH7Nsffuas UKen6WEino9G bXBqJigD9oV3	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 93arJtwJmuS9 WiQcrNTGZHPT Lny8GcCeVGc9 UKen6WEino9G bXBqJigD9oV3