General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000557439
Gene ID:	ENSG00000126215
Gene Name:	XRCC3
Sequence (UNICHARACTER ENCODING)	UUGGAGGAGAAGGCCGAGAGGAGCAGGACGGCGGGAAGAGGAGUGCGGAACCCGCGGGAGGAUGUGCACAGAGGGCCCAGGAGGAGCCUCAGGAGCCGGACUGCCGUUGGCCAACCGAGUCCCCAGGGAGACACUUAAGGGAAAUUAAACUGCAGAGUGCAAGAGAUGCCUCAGUCAAGUCAGCCAAAAACACGCGGGUCAUCCCCAAGCCCCAGAGAGUGACAGAGCCCCGAUGACACGGACACCUCGGCUGCUGUCACUUCCCUGGUUCGGGCCUCCCACAGGCUUUGAAUUGAAGGCGAGUGCCUCAGAAUUUGCAUCCAUUGUUCUGUCUUUCCUGGGAAGUUAUUCAUCCUGGUGGCCAGCCCACCGACAAAAUGGAUPUGGAUCUACUGGACCUGAAUCCCAGAAUUAUUGCUGCAAUUAAGAAAGCCAAACUGAAAUCGGUAAAGGAGGUUUUACACUUUUCUGGACCAGACUUGAAGAGACUGACCAACCUCUCCAGCCCCGAGGUCUGGCACUUGCUGAGAACGGCCUCCUUACACUUGCGGGGAAGCAGCAUCCUUACAGCACUGCAGCUGCACCAGCAGAAGGAGCGGUUCCCCACGCAGCACCAGCGCCUGAGCCUGGGCUGCCCGGUGCUGGACGCGCUGCUCCGCGGUGGCCUGCCCCUGGACGGCAUCACUGAGCUGGCCGGACGCAGCUCGGCAGGGAAGACCCAGCUGGCGCUGCAGCUCUGCCUGGCUGUGCAGUUCCCGCGGCAGCACGGAGGCCUGGAGGCUGAGUGGCAGUAUUUUUUCAUCGGUGGCACCUCCGAGCACAUCUGCUAGGCUCACUUCCCACACAGGGCCGGACCCCAGGCCCUGGACCCACAGGCCCAGCCAGCCACCUCCUCACGGGCCUGACCUGCCAGCAGCGGUGUGGCUGGGAACCUCACCUCUGCCACCCUCAGCCCAGGGGAGGGCACCCUCUUGUCAGGUGCCUGAGUCCCUGCGGCUGGUCUUGGGGAUGAGCCUGGAGACAGCCAGAAGCCGGGAGGACAGGAGUUGGCCUUGAAAAUGGGAGUCUCCCGCUUACCGCACGGAAGAGCUGCUGUGAGGUGGAGGCGGGACUCGAGCGUGCUCAGGAACGGGACGGGAGCCGCCCUCAUUCUCCAGCGUCCUCCGUGCCAGGCUUCGUGCAAAUCUGAUUUGUGCAAUGЖCUCCCCCUCAGCUUCCACCCCGUUGGCCUUUUCAGUGAAGCCCACACUCCCCGAUACCCAGGGЖCACAGAAGCCUUAGGACACCCUCCCUGAAUCCCCCAGCUGUGCCCAGCCCAGUGЖCUGCUGCGGGAUGACAGCACAGUCCAGCCUUGCGGGCCAGGGGAAGGGAGGGGGCCCCACGGCCACCGUGACCACAUGCAAGGUUAGGGGUCAGAUGUGCUUUCCUGGGGAAAUGЖCUUCCUUUCCUGGAUCCAAUCUAAAGGCCCGAAUUUUGAAAAGAAAGCGGCAGGCGGGCUCUGAAGUGAUUCCGACUCCCGUGCUUAAGCCGCGUGAGGCUCUCCCAGGCCUGCUGGGGCCCCGCCCACCGCUGGGCUGUCCACAGCCACCCUCCUGCCAGCUUCACGAUGUCCCCAUGЖCUGUGCAGCCCCUACAUAACGUCACCCCAACAAAAACACGCUGCUUGACCGGUUCCACCUGCUUCCGAGCCUUCCAGCCCAGCCUCUCUCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCUUCCUGUGGCUCCUGACUAGGGGCACAGUCACUGCUGGGGЖCACUGGUGGGGAAGGGAACCAGCCACAAAAGGGAUGUGGCCUCCCAAGGCAGUAUUUAUACGUUCCUGGCCUCAAGCGGGCCAGAUGCUUCUCAGAAGCUUAGUUCUGACACAGAAUGGGGCGGGGGGUUCCUGACCCAUUUUUGCAACUCUUCUUUACGUUUGAAAUUCUGUCAAAGCAAAAUCAGCUCAGAAUUAAAGGUUACGCGGЖCACUCACAAACAGGCUGCAUGACACGGCGUGGGGGCACUGGCUCUCCCACAACUGCAUGUGCCACUGCAGGAACAGGACGACGCCCCGUGGGCCACGGGGUCCUGGCUGGGCAGCCUUCCUGGCAUAGUCAGUGCUUAGAGAGCUCGCCGGCCUUGUCUUUUUGUUUUUGUUUUGCAGGAAACUGGAGUUUUAUUAUUACUCAAAUCAGUCCCCCUAAGCCUUCCUGUUUUUUAAAUUGAGAUGUAAUUUACAUGCCAUAAAAUUCCCUCUAAAAGUGUACAGUUCGGCCUGAUAGGCGCAGUACCUCAUGCCUGUAAUCCCAGCACUUUGGGAGGCCGAGGCUGAGGCAGGCGGAUCAUGAAGUCAGGAGUUCGAGAGCAGCCUGACCAACAUGGUGAAACCCAGUCUCUACUAAAAAUACAAAAAUUAGCUGGGCGUGGUAGCGCACGCCUUGUAAUCCCAGCUACUCAGAAGGCUGAGGCAGGAGAAUCACUUGAACCCGGGAGGCAGAGGUUGCAGUGAGCCGAGAUCGCACCACUGCACUCCAGCCUGGGCGACAGAGUGAGUCUCUUGUCUCUCAAAAAUUAAAAUAAAAUAAAUAAAUU
Sequence (SHORT NAMES ENCODING)	UUGGAGGAGAAGGCCGAGAGGAGCAGGACGGCGGGAAGAGGAGUGCGGAACCCGCGGGAGGAUGUGCACAGAGGGCCCAGGAGGAGCCUCAGGAGCCGGACUGCCGUUGGCCAACCGAGUCCCCAGGGAGACACUUAAGGGAAAUUAAACUGCAGAGUGCAAGAGAUGCCUCAGUCAAGUCAGCCAAAAACACGCGGGUCAUCCCCAAGCCCCAGAGAGUGACAGAGCCCCGAUGACACGGACACCUCGGCUGCUGUCACUUCCCUGGUUCGGGCCUCCCACAGGCUUUGAAUUGAAGGCGAGUGCCUCAGAAUUUGCAUCCAUUGUUCUGUCUUUCCUGGGAAGUUAUUCAUCCUGGUGGCCAGCCCACCGACAAAAUGGAUYUGGAUCUACUGGACCUGAAUCCCAGAAUUAUUGCUGCAAUUAAGAAAGCCAAACUGAAAUCGGUAAAGGAGGUUUUACACUUUUCUGGACCAGACUUGAAGAGACUGACCAACCUCUCCAGCCCCGAGGUCUGGCACUUGCUGAGAACGGCCUCCUUACACUUGCGGGGAAGCAGCAUCCUUACAGCACUGCAGCUGCACCAGCAGAAGGAGCGGUUCCCCACGCAGCACCAGCGCCUGAGCCUGGGCUGCCCGGUGCUGGACGCGCUGCUCCGCGGUGGCCUGCCCCUGGACGGCAUCACUGAGCUGGCCGGACGCAGCUCGGCAGGGAAGACCCAGCUGGCGCUGCAGCUCUGCCUGGCUGUGCAGUUCCCGCGGCAGCACGGAGGCCUGGAGGCUGAGUGGCAGUAUUUUUUCAUCGGUGGCACCUCCGAGCACAUCUGCUAGGCUCACUUCCCACACAGGGCCGGACCCCAGGCCCUGGACCCACAGGCCCAGCCAGCCACCUCCUCACGGGCCUGACCUGCCAGCAGCGGUGUGGCUGGGAACCUCACCUCUGCCACCCUCAGCCCAGGGGAGGGCACCCUCUUGUCAGGUGCCUGAGUCCCUGCGGCUGGUCUUGGGGAUGAGCCUGGAGACAGCCAGAAGCCGGGAGGACAGGAGUUGGCCUUGAAAAUGGGAGUCUCCCGCUUACCGCACGGAAGAGCUGCUGUGAGGUGGAGGCGGGACUCGAGCGUGCUCAGGAACGGGACGGGAGCCGCCCUCAUUCUCCAGCGUCCUCCGUGCCAGGCUUCGUGCAAAUCUGAUUUGUGCAAUGm6ACUCCCCCUCAGCUUCCACCCCGUUGGCCUUUUCAGUGAAGCCCACACUCCCCGAUACCCAGGGm6ACACAGAAGCCUUAGGACACCCUCCCUGAAUCCCCCAGCUGUGCCCAGCCCAGUGm6ACUGCUGCGGGAUGACAGCACAGUCCAGCCUUGCGGGCCAGGGGAAGGGAGGGGGCCCCACGGCCACCGUGACCACAUGCAAGGUUAGGGGUCAGAUGUGCUUUCCUGGGGAAAUGm6ACUUCCUUUCCUGGAUCCAAUCUAAAGGCCCGAAUUUUGAAAAGAAAGCGGCAGGCGGGCUCUGAAGUGAUUCCGACUCCCGUGCUUAAGCCGCGUGAGGCUCUCCCAGGCCUGCUGGGGCCCCGCCCACCGCUGGGCUGUCCACAGCCACCCUCCUGCCAGCUUCACGAUGUCCCCAUGm6ACUGUGCAGCCCCUACAUAACGUCACCCCAACAAAAACACGCUGCUUGACCGGUUCCACCUGCUUCCGAGCCUUCCAGCCCAGCCUCUCUCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCUUCCUGUGGCUCCUGACUAGGGGCACAGUCACUGCUGGGGm6ACACUGGUGGGGAAGGGAACCAGCCACAAAAGGGAUGUGGCCUCCCAAGGCAGUAUUUAUACGUUCCUGGCCUCAAGCGGGCCAGAUGCUUCUCAGAAGCUUAGUUCUGACACAGAAUGGGGCGGGGGGUUCCUGACCCAUUUUUGCAACUCUUCUUUACGUUUGAAAUUCUGUCAAAGCAAAAUCAGCUCAGAAUUAAAGGUUACGCGGm6ACACUCACAAACAGGCUGCAUGACACGGCGUGGGGGCACUGGCUCUCCCACAACUGCAUGUGCCACUGCAGGAACAGGACGACGCCCCGUGGGCCACGGGGUCCUGGCUGGGCAGCCUUCCUGGCAUAGUCAGUGCUUAGAGAGCUCGCCGGCCUUGUCUUUUUGUUUUUGUUUUGCAGGAAACUGGAGUUUUAUUAUUACUCAAAUCAGUCCCCCUAAGCCUUCCUGUUUUUUAAAUUGAGAUGUAAUUUACAUGCCAUAAAAUUCCCUCUAAAAGUGUACAGUUCGGCCUGAUAGGCGCAGUACCUCAUGCCUGUAAUCCCAGCACUUUGGGAGGCCGAGGCUGAGGCAGGCGGAUCAUGAAGUCAGGAGUUCGAGAGCAGCCUGACCAACAUGGUGAAACCCAGUCUCUACUAAAAAUACAAAAAUUAGCUGGGCGUGGUAGCGCACGCCUUGUAAUCCCAGCUACUCAGAAGGCUGAGGCAGGAGAAUCACUUGAACCCGGGAGGCAGAGGUUGCAGUGAGCCGAGAUCGCACCACUGCACUCCAGCCUGGGCGACAGAGUGAGUCUCUUGUCUCUCAAAAAUUAAAAUAAAAUAAAUAAAUU
Sequence (MODOMICS CODE ENCODING)	UUGGAGGAGAAGGCCGAGAGGAGCAGGACGGCGGGAAGAGGAGUGCGGAACCCGCGGGAGGAUGUGCACAGAGGGCCCAGGAGGAGCCUCAGGAGCCGGACUGCCGUUGGCCAACCGAGUCCCCAGGGAGACACUUAAGGGAAAUUAAACUGCAGAGUGCAAGAGAUGCCUCAGUCAAGUCAGCCAAAAACACGCGGGUCAUCCCCAAGCCCCAGAGAGUGACAGAGCCCCGAUGACACGGACACCUCGGCUGCUGUCACUUCCCUGGUUCGGGCCUCCCACAGGCUUUGAAUUGAAGGCGAGUGCCUCAGAAUUUGCAUCCAUUGUUCUGUCUUUCCUGGGAAGUUAUUCAUCCUGGUGGCCAGCCCACCGACAAAAUGGAU2000000009UUGGAUCUACUGGACCUGAAUCCCAGAAUUAUUGCUGCAAUUAAGAAAGCCAAACUGAAAUCGGUAAAGGAGGUUUUACACUUUUCUGGACCAGACUUGAAGAGACUGACCAACCUCUCCAGCCCCGAGGUCUGGCACUUGCUGAGAACGGCCUCCUUACACUUGCGGGGAAGCAGCAUCCUUACAGCACUGCAGCUGCACCAGCAGAAGGAGCGGUUCCCCACGCAGCACCAGCGCCUGAGCCUGGGCUGCCCGGUGCUGGACGCGCUGCUCCGCGGUGGCCUGCCCCUGGACGGCAUCACUGAGCUGGCCGGACGCAGCUCGGCAGGGAAGACCCAGCUGGCGCUGCAGCUCUGCCUGGCUGUGCAGUUCCCGCGGCAGCACGGAGGCCUGGAGGCUGAGUGGCAGUAUUUUUUCAUCGGUGGCACCUCCGAGCACAUCUGCUAGGCUCACUUCCCACACAGGGCCGGACCCCAGGCCCUGGACCCACAGGCCCAGCCAGCCACCUCCUCACGGGCCUGACCUGCCAGCAGCGGUGUGGCUGGGAACCUCACCUCUGCCACCCUCAGCCCAGGGGAGGGCACCCUCUUGUCAGGUGCCUGAGUCCCUGCGGCUGGUCUUGGGGAUGAGCCUGGAGACAGCCAGAAGCCGGGAGGACAGGAGUUGGCCUUGAAAAUGGGAGUCUCCCGCUUACCGCACGGAAGAGCUGCUGUGAGGUGGAGGCGGGACUCGAGCGUGCUCAGGAACGGGACGGGAGCCGCCCUCAUUCUCCAGCGUCCUCCGUGCCAGGCUUCGUGCAAAUCUGAUUUGUGCAAUG2000000006ACUCCCCCUCAGCUUCCACCCCGUUGGCCUUUUCAGUGAAGCCCACACUCCCCGAUACCCAGGG2000000006ACACAGAAGCCUUAGGACACCCUCCCUGAAUCCCCCAGCUGUGCCCAGCCCAGUG2000000006ACUGCUGCGGGAUGACAGCACAGUCCAGCCUUGCGGGCCAGGGGAAGGGAGGGGGCCCCACGGCCACCGUGACCACAUGCAAGGUUAGGGGUCAGAUGUGCUUUCCUGGGGAAAUG2000000006ACUUCCUUUCCUGGAUCCAAUCUAAAGGCCCGAAUUUUGAAAAGAAAGCGGCAGGCGGGCUCUGAAGUGAUUCCGACUCCCGUGCUUAAGCCGCGUGAGGCUCUCCCAGGCCUGCUGGGGCCCCGCCCACCGCUGGGCUGUCCACAGCCACCCUCCUGCCAGCUUCACGAUGUCCCCAUG2000000006ACUGUGCAGCCCCUACAUAACGUCACCCCAACAAAAACACGCUGCUUGACCGGUUCCACCUGCUUCCGAGCCUUCCAGCCCAGCCUCUCUCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCUUCCUGUGGCUCCUGACUAGGGGCACAGUCACUGCUGGGG2000000006ACACUGGUGGGGAAGGGAACCAGCCACAAAAGGGAUGUGGCCUCCCAAGGCAGUAUUUAUACGUUCCUGGCCUCAAGCGGGCCAGAUGCUUCUCAGAAGCUUAGUUCUGACACAGAAUGGGGCGGGGGGUUCCUGACCCAUUUUUGCAACUCUUCUUUACGUUUGAAAUUCUGUCAAAGCAAAAUCAGCUCAGAAUUAAAGGUUACGCGG2000000006ACACUCACAAACAGGCUGCAUGACACGGCGUGGGGGCACUGGCUCUCCCACAACUGCAUGUGCCACUGCAGGAACAGGACGACGCCCCGUGGGCCACGGGGUCCUGGCUGGGCAGCCUUCCUGGCAUAGUCAGUGCUUAGAGAGCUCGCCGGCCUUGUCUUUUUGUUUUUGUUUUGCAGGAAACUGGAGUUUUAUUAUUACUCAAAUCAGUCCCCCUAAGCCUUCCUGUUUUUUAAAUUGAGAUGUAAUUUACAUGCCAUAAAAUUCCCUCUAAAAGUGUACAGUUCGGCCUGAUAGGCGCAGUACCUCAUGCCUGUAAUCCCAGCACUUUGGGAGGCCGAGGCUGAGGCAGGCGGAUCAUGAAGUCAGGAGUUCGAGAGCAGCCUGACCAACAUGGUGAAACCCAGUCUCUACUAAAAAUACAAAAAUUAGCUGGGCGUGGUAGCGCACGCCUUGUAAUCCCAGCUACUCAGAAGGCUGAGGCAGGAGAAUCACUUGAACCCGGGAGGCAGAGGUUGCAGUGAGCCGAGAUCGCACCACUGCACUCCAGCCUGGGCGACAGAGUGAGUCUCUUGUCUCUCAAAAAUUAAAAUAAAAUAAAUAAAUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	384	1201	1265	1320	1436	1616	1783	1993
Modification Positions	Y	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	14:103711081:-	14:103705794:-	14:103705730:-	14:103705675:-	14:103705559:-	14:103705379:-	14:103705212:-	14:103705002:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	4HMi5ykupT9V 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	5Nnepx5V7yHo jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL Yfn77uLS5tv8	5Nnepx5V7yHo gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	5Nnepx5V7yHo aHkqKEJkRYyb gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL	msuJfBpJvM5H VyCX26p5UBRL BkoLW2CBToyL