General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000540608
Gene ID:	ENSG00000141458
Gene Name:	NPC1
Sequence (UNICHARACTER ENCODING)	AGCCUGCUGCCGCGGUCAGCGCCUGCUCCUGCUCCUCCGCUCCUCCUGCGCGGGGUGCUGAAACAGCCCGGGGAAGUAGAGCCGCCUCCGGGGAGCCCAACCAGCCGAACGCCGCCGGCGUCAGCAGCCUUGCGCGGCCACAGCAUGACCGCUCGCGGCCUGGCCCUUGGCCUCCUCCUGCUGCUACUGUGUCCAGCGCAGAUGUCCAPCCUGUUUUUAUAACCUACUGAACCUGUUUUGUGAGCUGACAUGUAGCCCUCGACAGAGUCAGUUUUUGAAUGUUACAGCUACUGAAGAUUAUGUUGAUCCUGUUACAAACCAGACGAAAACAAAUGUGAAAGAGUUACAAUACUACGUCGGACAGAGUUUUGCCAAUGCAAUGUACAAUGCCUGCCGGGAUGUGGAGGCCCCCUCAAGUAAUGACAAGGCCCUGGGACUCCUGUGUGGGAAGGACGCUGACGCCUGUAAUGCCACCAACUGGAUUGAAUACAUGUUCAAUAAGGACAAUGGACAGGCACCUUUUACCAUCACUCCUGUGUUUUCAGAUUUUCCAGUCCAUGGGAUGGAGCCCAUGAACAAUGCCACCAAAGGCUGUGACGAGUCUGUGGAUGAGGUCACAGCACCAUGUAGCUGCCAAGACUGCUCUAUUGUCUGUGGCCCCAAGCCCCAGCCCCCACCUCCUCCUGCUCCCUGGACGAUCCUUGGCUUGGACGCCAUGUAUGUCAUCAUGUGGAUCACCUACAUGGCGUUUUUGCUUGUGUUUUUUGGAGCAUUUUUUGCAGUGUGGUGCUACAGAAAACGGUAUUUUGUCUCCGAGUACACUCCCAUCGAUAGCAAUAUAGCUUUUUCUGUUAAUGCAAGUGACAAAGGAGAGGCGUCCUGCUGUGACCCUGUCAGCGCAGCAUUUGAGGGCUGCUUGAGGCGGCUGUUCACACGCUGGGGGUCUUUCUGCGUCCGAAACCCUGGCUGUGUCAUUUUCUUCUCGCUGGUCUUCAUUACUGCGUGUUCGUCAGGCCUGGUGUUUGUCCGGGUCACAACCAAUCCAGUUGACCUCUGGUCAGCCCCCAGCAGCCAGGCUCGCCUGGAAAAAGAGUACUUUGЖCCAGCACUUUGGGCCUUUCUUCCGGACGGAGCAGCUCAUCAUCCGGGCCCCUCUCACUGACAAACACAUUUACCAGCCAUACCCUUCGGGAGCUGAUGUACCCUUUGGACCUCCGCUUGACAUACAGAUACUGCACCAGGUUCUUGACUUACAAAUAGCCAUCGAAAACAUUACUGCCUCUUAUGACAAUGAGACUGUGACACUUCAAGACAUCUGCUUGGCCCCUCUUUCACCGUAUAACACGAЖCUGCACCAUUUUGAGUGUGUUAAAUUACUUCCAGAACAGCCAUUCCGUGCUGGACCACAAGAAAGGGGACGACUUCUUUGUGUAUGCCGAUUACCACACGCACUUUCUGUACUGCGUACGGGCUCCUGCCUCUCUGAAUGAUACAAGUUUGCUCCAUGACCCUUGUCUGGGUACGUUUGGUGGACCAGUGUUCCCGUGGCUUGUGUUGGGAGGCUAUGAUGAUCAAAACUACAAUAACGCCACUGCCCUUGUGAUUACCUUCCCUGUCAAUAAUUACUAUAAUGAUACAGAGAAGCUCCAGAGGGCCCAGGCCUGGGAAAAAGAGUUUAUUAAUUUUGUGAAAAACUACAAGAAUCCCAAUCUGACCAUUUCCUUCACUGCUGAACGAAGUAUUGAAGAUGAACUAAAUCGUGAAAGUGACAGUGAUGUCUUCACCGUUGUAAUUAGCUAUGCCAUCAUGUUUCUAUAUAUUUCCCUAGCCUUGGGGCACAUGAAAAGCUGUCGCAGGCUUCUGGUGGAUUCGAAGGUCUCACUAGGCAUCGCGGGCAUCUUGAUCGUGCUGAGCUCGGUGGCUUGCUCCUUGGGUGUCUUCAGCUACAUUGGGUUGCCCUUGACCCUCAUUGUGAUUGAAGUCAUCCCGUUCCUGGUGCUGGCUGUUGGAGUGGACAACAUCUUCAUUCUGGUGCAGGCCUACCAGAGAGAUGAACGUCUUCAAGGGGAAACCCUGGAUCAGCAGCUGGGCAGGGUCCUAGGAGAAGUGGCUCCCAGUAUGUUCCUGUCAPCCUUUUCUGAGACUGUAGCAUUUUUCUUAGGAGCAUUGUCCGUGAUGCCAGCCGUGCACACCUUCUCUCUCUUUGCGGGAUUGGCAGUCUUCAUUGACUUUCUUCUGCAGAUUACCUGUUUCGUGAGUCUCUUGGGGUUAGACAUUAAACGUCAAGAGAAAAAUCGGCUAGACAUCUUUUGCUGUGUCAGAGGUGCUGAAGAUGGAACAAGCGUCCAGGCCUCAGAGAGCUGUUUGUUUCGCUUCUUCAAAAACUCCUAUUCUCCACUUCUGCUAAAGGACUGGAUGAGACCAAUUGUGAUAGCAAUAUUUGUGGGUGUUCUGUCAUUCAGCAUCGCAGUCCUGAACAAAGUAGAUAUUGGAUUGGAUCAGUCUCUUUCGAUGCCAGAUGACUCCUACAUGGUGGAUUAUUUCAAAUCCAUCAGUCAGUACCUGCAUGCGGGUCCGCCUGUGUACUUUGUCCUGGAGGAAGGGCACGACUACACUUCUUCCAAGGGGCAGAACAUGGUGUGCGGCGGCAUGGGCUGCAACAAUGAUUCCCUGGUGCAGCAGAUAUUUAACGCGGCGCAGCUGGACAACUAGUCAGUACCACCUUGUCUUGUACUUCAGAAGCAGCGGAGGAGGCUCUCAGCCAGGCAGUCAGCUCAGGCCUGAAAUGUCUC
Sequence (SHORT NAMES ENCODING)	AGCCUGCUGCCGCGGUCAGCGCCUGCUCCUGCUCCUCCGCUCCUCCUGCGCGGGGUGCUGAAACAGCCCGGGGAAGUAGAGCCGCCUCCGGGGAGCCCAACCAGCCGAACGCCGCCGGCGUCAGCAGCCUUGCGCGGCCACAGCAUGACCGCUCGCGGCCUGGCCCUUGGCCUCCUCCUGCUGCUACUGUGUCCAGCGCAGAUGUCCAYCCUGUUUUUAUAACCUACUGAACCUGUUUUGUGAGCUGACAUGUAGCCCUCGACAGAGUCAGUUUUUGAAUGUUACAGCUACUGAAGAUUAUGUUGAUCCUGUUACAAACCAGACGAAAACAAAUGUGAAAGAGUUACAAUACUACGUCGGACAGAGUUUUGCCAAUGCAAUGUACAAUGCCUGCCGGGAUGUGGAGGCCCCCUCAAGUAAUGACAAGGCCCUGGGACUCCUGUGUGGGAAGGACGCUGACGCCUGUAAUGCCACCAACUGGAUUGAAUACAUGUUCAAUAAGGACAAUGGACAGGCACCUUUUACCAUCACUCCUGUGUUUUCAGAUUUUCCAGUCCAUGGGAUGGAGCCCAUGAACAAUGCCACCAAAGGCUGUGACGAGUCUGUGGAUGAGGUCACAGCACCAUGUAGCUGCCAAGACUGCUCUAUUGUCUGUGGCCCCAAGCCCCAGCCCCCACCUCCUCCUGCUCCCUGGACGAUCCUUGGCUUGGACGCCAUGUAUGUCAUCAUGUGGAUCACCUACAUGGCGUUUUUGCUUGUGUUUUUUGGAGCAUUUUUUGCAGUGUGGUGCUACAGAAAACGGUAUUUUGUCUCCGAGUACACUCCCAUCGAUAGCAAUAUAGCUUUUUCUGUUAAUGCAAGUGACAAAGGAGAGGCGUCCUGCUGUGACCCUGUCAGCGCAGCAUUUGAGGGCUGCUUGAGGCGGCUGUUCACACGCUGGGGGUCUUUCUGCGUCCGAAACCCUGGCUGUGUCAUUUUCUUCUCGCUGGUCUUCAUUACUGCGUGUUCGUCAGGCCUGGUGUUUGUCCGGGUCACAACCAAUCCAGUUGACCUCUGGUCAGCCCCCAGCAGCCAGGCUCGCCUGGAAAAAGAGUACUUUGm6ACCAGCACUUUGGGCCUUUCUUCCGGACGGAGCAGCUCAUCAUCCGGGCCCCUCUCACUGACAAACACAUUUACCAGCCAUACCCUUCGGGAGCUGAUGUACCCUUUGGACCUCCGCUUGACAUACAGAUACUGCACCAGGUUCUUGACUUACAAAUAGCCAUCGAAAACAUUACUGCCUCUUAUGACAAUGAGACUGUGACACUUCAAGACAUCUGCUUGGCCCCUCUUUCACCGUAUAACACGAm6ACUGCACCAUUUUGAGUGUGUUAAAUUACUUCCAGAACAGCCAUUCCGUGCUGGACCACAAGAAAGGGGACGACUUCUUUGUGUAUGCCGAUUACCACACGCACUUUCUGUACUGCGUACGGGCUCCUGCCUCUCUGAAUGAUACAAGUUUGCUCCAUGACCCUUGUCUGGGUACGUUUGGUGGACCAGUGUUCCCGUGGCUUGUGUUGGGAGGCUAUGAUGAUCAAAACUACAAUAACGCCACUGCCCUUGUGAUUACCUUCCCUGUCAAUAAUUACUAUAAUGAUACAGAGAAGCUCCAGAGGGCCCAGGCCUGGGAAAAAGAGUUUAUUAAUUUUGUGAAAAACUACAAGAAUCCCAAUCUGACCAUUUCCUUCACUGCUGAACGAAGUAUUGAAGAUGAACUAAAUCGUGAAAGUGACAGUGAUGUCUUCACCGUUGUAAUUAGCUAUGCCAUCAUGUUUCUAUAUAUUUCCCUAGCCUUGGGGCACAUGAAAAGCUGUCGCAGGCUUCUGGUGGAUUCGAAGGUCUCACUAGGCAUCGCGGGCAUCUUGAUCGUGCUGAGCUCGGUGGCUUGCUCCUUGGGUGUCUUCAGCUACAUUGGGUUGCCCUUGACCCUCAUUGUGAUUGAAGUCAUCCCGUUCCUGGUGCUGGCUGUUGGAGUGGACAACAUCUUCAUUCUGGUGCAGGCCUACCAGAGAGAUGAACGUCUUCAAGGGGAAACCCUGGAUCAGCAGCUGGGCAGGGUCCUAGGAGAAGUGGCUCCCAGUAUGUUCCUGUCAYCCUUUUCUGAGACUGUAGCAUUUUUCUUAGGAGCAUUGUCCGUGAUGCCAGCCGUGCACACCUUCUCUCUCUUUGCGGGAUUGGCAGUCUUCAUUGACUUUCUUCUGCAGAUUACCUGUUUCGUGAGUCUCUUGGGGUUAGACAUUAAACGUCAAGAGAAAAAUCGGCUAGACAUCUUUUGCUGUGUCAGAGGUGCUGAAGAUGGAACAAGCGUCCAGGCCUCAGAGAGCUGUUUGUUUCGCUUCUUCAAAAACUCCUAUUCUCCACUUCUGCUAAAGGACUGGAUGAGACCAAUUGUGAUAGCAAUAUUUGUGGGUGUUCUGUCAUUCAGCAUCGCAGUCCUGAACAAAGUAGAUAUUGGAUUGGAUCAGUCUCUUUCGAUGCCAGAUGACUCCUACAUGGUGGAUUAUUUCAAAUCCAUCAGUCAGUACCUGCAUGCGGGUCCGCCUGUGUACUUUGUCCUGGAGGAAGGGCACGACUACACUUCUUCCAAGGGGCAGAACAUGGUGUGCGGCGGCAUGGGCUGCAACAAUGAUUCCCUGGUGCAGCAGAUAUUUAACGCGGCGCAGCUGGACAACUAGUCAGUACCACCUUGUCUUGUACUUCAGAAGCAGCGGAGGAGGCUCUCAGCCAGGCAGUCAGCUCAGGCCUGAAAUGUCUC
Sequence (MODOMICS CODE ENCODING)	AGCCUGCUGCCGCGGUCAGCGCCUGCUCCUGCUCCUCCGCUCCUCCUGCGCGGGGUGCUGAAACAGCCCGGGGAAGUAGAGCCGCCUCCGGGGAGCCCAACCAGCCGAACGCCGCCGGCGUCAGCAGCCUUGCGCGGCCACAGCAUGACCGCUCGCGGCCUGGCCCUUGGCCUCCUCCUGCUGCUACUGUGUCCAGCGCAGAUGUCCA2000000009UCCUGUUUUUAUAACCUACUGAACCUGUUUUGUGAGCUGACAUGUAGCCCUCGACAGAGUCAGUUUUUGAAUGUUACAGCUACUGAAGAUUAUGUUGAUCCUGUUACAAACCAGACGAAAACAAAUGUGAAAGAGUUACAAUACUACGUCGGACAGAGUUUUGCCAAUGCAAUGUACAAUGCCUGCCGGGAUGUGGAGGCCCCCUCAAGUAAUGACAAGGCCCUGGGACUCCUGUGUGGGAAGGACGCUGACGCCUGUAAUGCCACCAACUGGAUUGAAUACAUGUUCAAUAAGGACAAUGGACAGGCACCUUUUACCAUCACUCCUGUGUUUUCAGAUUUUCCAGUCCAUGGGAUGGAGCCCAUGAACAAUGCCACCAAAGGCUGUGACGAGUCUGUGGAUGAGGUCACAGCACCAUGUAGCUGCCAAGACUGCUCUAUUGUCUGUGGCCCCAAGCCCCAGCCCCCACCUCCUCCUGCUCCCUGGACGAUCCUUGGCUUGGACGCCAUGUAUGUCAUCAUGUGGAUCACCUACAUGGCGUUUUUGCUUGUGUUUUUUGGAGCAUUUUUUGCAGUGUGGUGCUACAGAAAACGGUAUUUUGUCUCCGAGUACACUCCCAUCGAUAGCAAUAUAGCUUUUUCUGUUAAUGCAAGUGACAAAGGAGAGGCGUCCUGCUGUGACCCUGUCAGCGCAGCAUUUGAGGGCUGCUUGAGGCGGCUGUUCACACGCUGGGGGUCUUUCUGCGUCCGAAACCCUGGCUGUGUCAUUUUCUUCUCGCUGGUCUUCAUUACUGCGUGUUCGUCAGGCCUGGUGUUUGUCCGGGUCACAACCAAUCCAGUUGACCUCUGGUCAGCCCCCAGCAGCCAGGCUCGCCUGGAAAAAGAGUACUUUG2000000006ACCAGCACUUUGGGCCUUUCUUCCGGACGGAGCAGCUCAUCAUCCGGGCCCCUCUCACUGACAAACACAUUUACCAGCCAUACCCUUCGGGAGCUGAUGUACCCUUUGGACCUCCGCUUGACAUACAGAUACUGCACCAGGUUCUUGACUUACAAAUAGCCAUCGAAAACAUUACUGCCUCUUAUGACAAUGAGACUGUGACACUUCAAGACAUCUGCUUGGCCCCUCUUUCACCGUAUAACACGA2000000006ACUGCACCAUUUUGAGUGUGUUAAAUUACUUCCAGAACAGCCAUUCCGUGCUGGACCACAAGAAAGGGGACGACUUCUUUGUGUAUGCCGAUUACCACACGCACUUUCUGUACUGCGUACGGGCUCCUGCCUCUCUGAAUGAUACAAGUUUGCUCCAUGACCCUUGUCUGGGUACGUUUGGUGGACCAGUGUUCCCGUGGCUUGUGUUGGGAGGCUAUGAUGAUCAAAACUACAAUAACGCCACUGCCCUUGUGAUUACCUUCCCUGUCAAUAAUUACUAUAAUGAUACAGAGAAGCUCCAGAGGGCCCAGGCCUGGGAAAAAGAGUUUAUUAAUUUUGUGAAAAACUACAAGAAUCCCAAUCUGACCAUUUCCUUCACUGCUGAACGAAGUAUUGAAGAUGAACUAAAUCGUGAAAGUGACAGUGAUGUCUUCACCGUUGUAAUUAGCUAUGCCAUCAUGUUUCUAUAUAUUUCCCUAGCCUUGGGGCACAUGAAAAGCUGUCGCAGGCUUCUGGUGGAUUCGAAGGUCUCACUAGGCAUCGCGGGCAUCUUGAUCGUGCUGAGCUCGGUGGCUUGCUCCUUGGGUGUCUUCAGCUACAUUGGGUUGCCCUUGACCCUCAUUGUGAUUGAAGUCAUCCCGUUCCUGGUGCUGGCUGUUGGAGUGGACAACAUCUUCAUUCUGGUGCAGGCCUACCAGAGAGAUGAACGUCUUCAAGGGGAAACCCUGGAUCAGCAGCUGGGCAGGGUCCUAGGAGAAGUGGCUCCCAGUAUGUUCCUGUCA2000000009UCCUUUUCUGAGACUGUAGCAUUUUUCUUAGGAGCAUUGUCCGUGAUGCCAGCCGUGCACACCUUCUCUCUCUUUGCGGGAUUGGCAGUCUUCAUUGACUUUCUUCUGCAGAUUACCUGUUUCGUGAGUCUCUUGGGGUUAGACAUUAAACGUCAAGAGAAAAAUCGGCUAGACAUCUUUUGCUGUGUCAGAGGUGCUGAAGAUGGAACAAGCGUCCAGGCCUCAGAGAGCUGUUUGUUUCGCUUCUUCAAAAACUCCUAUUCUCCACUUCUGCUAAAGGACUGGAUGAGACCAAUUGUGAUAGCAAUAUUUGUGGGUGUUCUGUCAUUCAGCAUCGCAGUCCUGAACAAAGUAGAUAUUGGAUUGGAUCAGUCUCUUUCGAUGCCAGAUGACUCCUACAUGGUGGAUUAUUUCAAAUCCAUCAGUCAGUACCUGCAUGCGGGUCCGCCUGUGUACUUUGUCCUGGAGGAAGGGCACGACUACACUUCUUCCAAGGGGCAGAACAUGGUGUGCGGCGGCAUGGGCUGCAACAAUGAUUCCCUGGUGCAGCAGAUAUUUAACGCGGCGCAGCUGGACAACUAGUCAGUACCACCUUGUCUUGUACUUCAGAAGCAGCGGAGGAGGCUCUCAGCCAGGCAGUCAGCUCAGGCCUGAAAUGUCUC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	209	1101	1347	2129
Modification Positions	Y	m6A	m6A	Y
Genomic Coordinates	18:23568991:-	18:23556382:-	18:23554878:-	18:23543485:-
Level of Experimental Evidence	3	3	3	3
Level of Experimental Reliability	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	bXBqJigD9oV3 Yfn77uLS5tv8	bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8