General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000408011
Gene ID:	ENSG00000134504
Gene Name:	KCTD1
Sequence (UNICHARACTER ENCODING)	CUGGACCGGCGCGGЖCUUGCCCCAGACCUACGGGGAGCGCCCCAGGUCUUUAAUGACAGCUUAAAUGUGGCUGUUGGAAAAGUCGAAAGGGAUGUGGCUGACGUGGGGCGUGUUUCGCUCCUUUGCAAGAGUCGGAAAGGGAGUUGGGAGCCGCGCGGCUGGCCCCAGGCCCCCGCGCCUCGCCGCCAGCAAGUAGGUGGGGGAGCCGCCGCCGCCGCCAGCCCCAUCCCGCUCCCAAGCCUCGCCCGCUGCGCCCUGGCCGCGGGCGCCGAGAGGGUGCGGGGCCUCGCCGUGCCUCCUCCACCCUGCUCAUUAACCUGCCUGCUCCGCUCCGCUCCGGGCGGCCCCAGACACGGGUUUCCCGCGGCAGCACCCGCGGCCCGCCCGGCGCAGCCGCCGCCCCGACCCCCCGGCUCCGGGGGGCAAUGAGGGGGCAGUGGAAGGGGCACUGCUCCUCGGGCAUUACUUAGAGAAACGAGACCGUCCCGCCCUCUCGCCGGCCCUCCCUCUCUCCCGCCCGGGCCCGCGCAAUUCUCCGCCAGAGGGACAGUCGGCCCAAUAUGUCAAGACCUCUGAUCACUAGAUCCCCUGCAUCUCCACUGAACAACCAAGGCAUCCCUACUCCAGCACAACUCACAAAAUCCAAUGCGCCUGUCCACAUUGAUGUGGGCGGCCACAUGUACACCAGCAGCCUGGCCACCCUCACCAAAUACCCUGAAUCCAGAAUCGGAAGACUUUUUGAUGGUACAGAGCCCAUUGUUUUGGACAGUCUCAAACAGCACUAUUUCAUUGACAGAGAUGGACAGAUGUUCAGAUAUAUCUUGAAUUUUCUACGAACAPCCAAACUCCUCAUUCCUGAUGAUUUCAAGGACUACACUUUGUUAUAUGAAGAGGCAAAAUAUUUUCAGCUUCAGCCCAUGUUGUUGGAGAUGGAAAGAUGGAAGCAGGACAGAGAAACUGGUCGAUUUUCAAGGCCCUGUGAGUGCCUCGUCGUGCGUGUGGCCCCAGACCUCGGAGAAAGGAUCACGCUAAGCGGUGACAAAUCCUUGAUAGAAGAAGUAUUUCCAGAGAUCGGCGACGUGAUGUGUAACUCUGUCAAUGCAGGCUGGAAUCACGACUCGACGCACGUCAUCAGGUUUCCACUAAAUGGCUACUGUCACCUCAACUCAGUCCAGGUCCUCGAGAGGUUGCAGCAAAGAGGAUPUGAAAUCGUGGGCUCCUGUGGGGGAGGAGUAGACUCGUCCCAGUUCAGCGAAUACGUCCUUCGGCGGGAACUGAGGCGGACGCCCCGUGUACCCUCCGUCAPCCGGAUAAAGCAAGAGCCUCUGGACUAAAUGGЖCAUAUUUCUUAUGCAAAAAGGAAAACACACACAACCAAUAЖCUCAAACAAAAAAGGGЖCAUUUAUGUGCAGUUGGGACAGCAAЖCCAAGUCCUGGACGUAAAAUCGAAUAAAAGACACAUUUAUAUCCAAUAGAGACCACACCUGUAUUCAUAUGGGAACAAUUGGAAUAGUGAUAUCCUCAAGGUGUAAAAAAUAUAUAAAUAUAUAUAUAUAUGUCAAAAGGUAGGAAAUGCAAAAAAGAAAAAAAAAAAAGGUGACAGCCGCAGUUGGUGCUGUGAUGGCCGUGAAGUGUCCUGGGCCUUCCGAGGCCUCUGACAAAUAAACAAGCCAUGAGUGGUGAGGACACAGUCUCCUUACAGUUUCCAUUGCCAACAACAGCCAPCCAUAUUUCUUUUUUCCUUUGUCUUUCUUUUUCCUUUUUUUUUAAAAAAACAAAACAAACAAAACACCUUGAAUCAAGUUUGUUUGUAUAUGGAGGUUCCACGUCUUUCUUUAGGCAGGGACCAGGCAGGACUUCAGAAAAACCCUCAUGAGCACAUUGCAAAGAUGUUAGACAUGAAAUUUUAAAUGUAGUUUGUACAGAAGUCACACUUUUUUGUCCACCUCACAGAUGUGAACUPUACUUUGUUUUAAAACUGAUCAGUUUUGCCAAGGGGCCAGAAUUAUUCCUUGUUAGAAUUGCUCCAGUPCAAGUCUGCUGCUUUCCUACAAUUUUUCAAAUUUUAUAAUGUAUUAAAUACAAUAAACUCUGUUUAAAAAAUAA
Sequence (SHORT NAMES ENCODING)	CUGGACCGGCGCGGm6ACUUGCCCCAGACCUACGGGGAGCGCCCCAGGUCUUUAAUGACAGCUUAAAUGUGGCUGUUGGAAAAGUCGAAAGGGAUGUGGCUGACGUGGGGCGUGUUUCGCUCCUUUGCAAGAGUCGGAAAGGGAGUUGGGAGCCGCGCGGCUGGCCCCAGGCCCCCGCGCCUCGCCGCCAGCAAGUAGGUGGGGGAGCCGCCGCCGCCGCCAGCCCCAUCCCGCUCCCAAGCCUCGCCCGCUGCGCCCUGGCCGCGGGCGCCGAGAGGGUGCGGGGCCUCGCCGUGCCUCCUCCACCCUGCUCAUUAACCUGCCUGCUCCGCUCCGCUCCGGGCGGCCCCAGACACGGGUUUCCCGCGGCAGCACCCGCGGCCCGCCCGGCGCAGCCGCCGCCCCGACCCCCCGGCUCCGGGGGGCAAUGAGGGGGCAGUGGAAGGGGCACUGCUCCUCGGGCAUUACUUAGAGAAACGAGACCGUCCCGCCCUCUCGCCGGCCCUCCCUCUCUCCCGCCCGGGCCCGCGCAAUUCUCCGCCAGAGGGACAGUCGGCCCAAUAUGUCAAGACCUCUGAUCACUAGAUCCCCUGCAUCUCCACUGAACAACCAAGGCAUCCCUACUCCAGCACAACUCACAAAAUCCAAUGCGCCUGUCCACAUUGAUGUGGGCGGCCACAUGUACACCAGCAGCCUGGCCACCCUCACCAAAUACCCUGAAUCCAGAAUCGGAAGACUUUUUGAUGGUACAGAGCCCAUUGUUUUGGACAGUCUCAAACAGCACUAUUUCAUUGACAGAGAUGGACAGAUGUUCAGAUAUAUCUUGAAUUUUCUACGAACAYCCAAACUCCUCAUUCCUGAUGAUUUCAAGGACUACACUUUGUUAUAUGAAGAGGCAAAAUAUUUUCAGCUUCAGCCCAUGUUGUUGGAGAUGGAAAGAUGGAAGCAGGACAGAGAAACUGGUCGAUUUUCAAGGCCCUGUGAGUGCCUCGUCGUGCGUGUGGCCCCAGACCUCGGAGAAAGGAUCACGCUAAGCGGUGACAAAUCCUUGAUAGAAGAAGUAUUUCCAGAGAUCGGCGACGUGAUGUGUAACUCUGUCAAUGCAGGCUGGAAUCACGACUCGACGCACGUCAUCAGGUUUCCACUAAAUGGCUACUGUCACCUCAACUCAGUCCAGGUCCUCGAGAGGUUGCAGCAAAGAGGAUYUGAAAUCGUGGGCUCCUGUGGGGGAGGAGUAGACUCGUCCCAGUUCAGCGAAUACGUCCUUCGGCGGGAACUGAGGCGGACGCCCCGUGUACCCUCCGUCAYCCGGAUAAAGCAAGAGCCUCUGGACUAAAUGGm6ACAUAUUUCUUAUGCAAAAAGGAAAACACACACAACCAAUAm6ACUCAAACAAAAAAGGGm6ACAUUUAUGUGCAGUUGGGACAGCAAm6ACCAAGUCCUGGACGUAAAAUCGAAUAAAAGACACAUUUAUAUCCAAUAGAGACCACACCUGUAUUCAUAUGGGAACAAUUGGAAUAGUGAUAUCCUCAAGGUGUAAAAAAUAUAUAAAUAUAUAUAUAUAUGUCAAAAGGUAGGAAAUGCAAAAAAGAAAAAAAAAAAAGGUGACAGCCGCAGUUGGUGCUGUGAUGGCCGUGAAGUGUCCUGGGCCUUCCGAGGCCUCUGACAAAUAAACAAGCCAUGAGUGGUGAGGACACAGUCUCCUUACAGUUUCCAUUGCCAACAACAGCCAYCCAUAUUUCUUUUUUCCUUUGUCUUUCUUUUUCCUUUUUUUUUAAAAAAACAAAACAAACAAAACACCUUGAAUCAAGUUUGUUUGUAUAUGGAGGUUCCACGUCUUUCUUUAGGCAGGGACCAGGCAGGACUUCAGAAAAACCCUCAUGAGCACAUUGCAAAGAUGUUAGACAUGAAAUUUUAAAUGUAGUUUGUACAGAAGUCACACUUUUUUGUCCACCUCACAGAUGUGAACUYUACUUUGUUUUAAAACUGAUCAGUUUUGCCAAGGGGCCAGAAUUAUUCCUUGUUAGAAUUGCUCCAGUYCAAGUCUGCUGCUUUCCUACAAUUUUUCAAAUUUUAUAAUGUAUUAAAUACAAUAAACUCUGUUUAAAAAAUAA
Sequence (MODOMICS CODE ENCODING)	CUGGACCGGCGCGG2000000006ACUUGCCCCAGACCUACGGGGAGCGCCCCAGGUCUUUAAUGACAGCUUAAAUGUGGCUGUUGGAAAAGUCGAAAGGGAUGUGGCUGACGUGGGGCGUGUUUCGCUCCUUUGCAAGAGUCGGAAAGGGAGUUGGGAGCCGCGCGGCUGGCCCCAGGCCCCCGCGCCUCGCCGCCAGCAAGUAGGUGGGGGAGCCGCCGCCGCCGCCAGCCCCAUCCCGCUCCCAAGCCUCGCCCGCUGCGCCCUGGCCGCGGGCGCCGAGAGGGUGCGGGGCCUCGCCGUGCCUCCUCCACCCUGCUCAUUAACCUGCCUGCUCCGCUCCGCUCCGGGCGGCCCCAGACACGGGUUUCCCGCGGCAGCACCCGCGGCCCGCCCGGCGCAGCCGCCGCCCCGACCCCCCGGCUCCGGGGGGCAAUGAGGGGGCAGUGGAAGGGGCACUGCUCCUCGGGCAUUACUUAGAGAAACGAGACCGUCCCGCCCUCUCGCCGGCCCUCCCUCUCUCCCGCCCGGGCCCGCGCAAUUCUCCGCCAGAGGGACAGUCGGCCCAAUAUGUCAAGACCUCUGAUCACUAGAUCCCCUGCAUCUCCACUGAACAACCAAGGCAUCCCUACUCCAGCACAACUCACAAAAUCCAAUGCGCCUGUCCACAUUGAUGUGGGCGGCCACAUGUACACCAGCAGCCUGGCCACCCUCACCAAAUACCCUGAAUCCAGAAUCGGAAGACUUUUUGAUGGUACAGAGCCCAUUGUUUUGGACAGUCUCAAACAGCACUAUUUCAUUGACAGAGAUGGACAGAUGUUCAGAUAUAUCUUGAAUUUUCUACGAACA2000000009UCCAAACUCCUCAUUCCUGAUGAUUUCAAGGACUACACUUUGUUAUAUGAAGAGGCAAAAUAUUUUCAGCUUCAGCCCAUGUUGUUGGAGAUGGAAAGAUGGAAGCAGGACAGAGAAACUGGUCGAUUUUCAAGGCCCUGUGAGUGCCUCGUCGUGCGUGUGGCCCCAGACCUCGGAGAAAGGAUCACGCUAAGCGGUGACAAAUCCUUGAUAGAAGAAGUAUUUCCAGAGAUCGGCGACGUGAUGUGUAACUCUGUCAAUGCAGGCUGGAAUCACGACUCGACGCACGUCAUCAGGUUUCCACUAAAUGGCUACUGUCACCUCAACUCAGUCCAGGUCCUCGAGAGGUUGCAGCAAAGAGGAU2000000009UUGAAAUCGUGGGCUCCUGUGGGGGAGGAGUAGACUCGUCCCAGUUCAGCGAAUACGUCCUUCGGCGGGAACUGAGGCGGACGCCCCGUGUACCCUCCGUCA2000000009UCCGGAUAAAGCAAGAGCCUCUGGACUAAAUGG2000000006ACAUAUUUCUUAUGCAAAAAGGAAAACACACACAACCAAUA2000000006ACUCAAACAAAAAAGGG2000000006ACAUUUAUGUGCAGUUGGGACAGCAA2000000006ACCAAGUCCUGGACGUAAAAUCGAAUAAAAGACACAUUUAUAUCCAAUAGAGACCACACCUGUAUUCAUAUGGGAACAAUUGGAAUAGUGAUAUCCUCAAGGUGUAAAAAAUAUAUAAAUAUAUAUAUAUAUGUCAAAAGGUAGGAAAUGCAAAAAAGAAAAAAAAAAAAGGUGACAGCCGCAGUUGGUGCUGUGAUGGCCGUGAAGUGUCCUGGGCCUUCCGAGGCCUCUGACAAAUAAACAAGCCAUGAGUGGUGAGGACACAGUCUCCUUACAGUUUCCAUUGCCAACAACAGCCA2000000009UCCAUAUUUCUUUUUUCCUUUGUCUUUCUUUUUCCUUUUUUUUUAAAAAAACAAAACAAACAAAACACCUUGAAUCAAGUUUGUUUGUAUAUGGAGGUUCCACGUCUUUCUUUAGGCAGGGACCAGGCAGGACUUCAGAAAAACCCUCAUGAGCACAUUGCAAAGAUGUUAGACAUGAAAUUUUAAAUGUAGUUUGUACAGAAGUCACACUUUUUUGUCCACCUCACAGAUGUGAACU2000000009UUACUUUGUUUUAAAACUGAUCAGUUUUGCCAAGGGGCCAGAAUUAUUCCUUGUUAGAAUUGCUCCAGU2000000009UCAAGUCUGCUGCUUUCCUACAAUUUUUCAAAUUUUAUAAUGUAUUAAAUACAAUAAACUCUGUUUAAAAAAUAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	15	840	1204	1306	1339	1380	1397	1423	1722	1960	2029
Modification Positions	m6A	Y	Y	Y	m6A	m6A	m6A	m6A	Y	Y	Y
Genomic Coordinates	18:26549421:-	18:26476544:-	18:26455873:-	18:26455771:-	18:26455738:-	18:26455697:-	18:26455680:-	18:26455654:-	18:26455355:-	18:26455117:-	18:26455048:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	msuJfBpJvM5H VyCX26p5UBRL	bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	Ap2q43bQLNek bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP a7o5Kmjr4Tdp Yfn77uLS5tv8	aEoRHyGnepSt BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8