General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000589444
Gene ID:	ENSG00000175354
Gene Name:	PTPN2
Sequence (UNICHARACTER ENCODING)	GAAUCUAUUAGAAUUUUCUAAAAUGGAGCCCAUUUGUCUUUUCAGUCUUGCAAGUAAAGUCUUUAAAACAAUUAAGCCUCCCAAUGAUUUAACCGUAUUUUCUUACCCCCCCACCCUGAAUAAUAUUUACAAAGAAAUAAUAACGUGAAUUUUUAAAAACCCCGUCCUUCAGUUGUUAUAAAUGAUAGUUCAUUCUUGGUAAGUAUAUCUGUAACAAAAUACUGGGGAAGGACAUGAGGUAUGGUGAACACUUAAAAUUCUGCCAGCCAGCUUAAAUACAUAAUCUAAAUUUAACCCACGUAACACCUCUUCUAGGUAAACAGCAUUCUCCCUAUAUUCAGAUGAGAAAACUGAGUCAAAGAAUAAGUAACUUGCCCAAGAUUGCACAGCUAGUACAUGACAGAACUGAGAUUCACUCUGCAGUCUGUAGACUUCCAGUAACUCCAAACCUCAUACUUUUUCUUUUAUGUUACACGGACUCUGUUUUUAAUGGAAUAUUUAAAUGAGAUAUUUAAGUGGGAAAGUAAUAGACAACCACUCUUACCUGUUAAAAUCCAAAGUAAUUCUCUAGUUUUUAAAUGGAGCACAUUUAAAAAACUUUGUGCACCAGUUUGAACUACCACUGCAACAGAGAAAUACUAGAACAUCAGAGUAUUCUCUAAACCAGAUCAUUACUUCAUUCACUUUGAUUGAAUUGAGUUGCUUAUUUUAAAAAGACUUCUGGAUGCAUGGAAAACAUAUAUAUUUUGCAGCACUCAGAAUCAAUACAAAGUACCUUCAGCCACUUUGGUUCACAUUCUGAAGAUUCAUGUAAUAAACACCCAUAGUAGUUGUGGGCUCACAUUAUCUAAUGAGAAUGUUUUCUUGAUGACUUGACAUUUCUCCGUCACUGUUGGAUAAUCAGAGAAAAAAAGGACGUUCAGAACACCAAGGUGCUUGGUACAAUUAUGCCAAGUGCCCUGUCUUUAAAGGGAGUAGCCUAAUUCUCAGCAUUUGGGAGUUUUUGACUAAAUGUGUGGAUAUGAUUUGUAUUUCCUAUUUCUUAAUAUAUAUGUGAAGAUACAAUACUGACAAGUACUUAGAUUUGGAGGUUUUGCGGUACUGAGGGGAGUUGGGGGAAGAAUGGAAAUACCAUUGACCUCCUAAAAAGUUGUUACUUGCAAAGUUUGGGAGGUGACAUCAAAAACUCAACUGCCCUUACAAUAGUCAUUCCAUCCAUCUGUUGCUUAUUUGAAUUCUCAUUUAUUUUUACUUUAUGGCAUUAAAAUACAAUAAAUCUGUCAAUUAUGUAUUUUAUAUUAGUAGUAGCUUAAGAUUGGGUCACUUCAUUUCGGUAGAUAUAAUUGUUAGUAUUAUCCUUCAGGACAAAAAGCAUCUGCUAACAACCUGUGGUUUAAAAAUAUAGGCCAACUUUAUGUUCAAACAUUAUGUUGAUAAUAUUUUUAGCAGUAUUACACAGUGGAGGUCCAAAUUGGAUUAGACUUUUGCAUUGAAUUCCAAAGUAUUGGUAAGUCUAGCACAUAGUAUAAAGUCUUGCUAAAUUCUUGUGGGUACAUUAUUUUUAAAACCUGUCUGUCUGUCGGUAUCACACAGAGGUCACUUCUUGAGUAAAAUAAGAUGACCUUAAGAAUUCACAUAAUUCUUGAAGAAGAAUAUAAGUCACGAUGCUUCCACAUGAGGCCGCGUCACACCACCAUCGUUUGGAAAUCCAGCACCCCAGCCGUUUUACCCUAAGAUAACAGUGCAGCACUUAGUGUGGUUGAAUGUGUCAUGUGGGAAUGAUUUUUGGUCACCUUUUCAGUUCAUUGUUAGUCCUUUUAUGUUUGUGUGCAUCUAUGUUCGUCUGUGUGUUUGGUAAAUAUGAAUUGAAUAGAUGACUUCUUAUUUUAUGUUUUAGGCCAAGAUUGACAGACACCUAAUAUUCAUGACUUGAGAAUAUUCUGCAGCUAUAAAUUUUGAACCAUUGAUGUGCAAAGCAAGACCUGAAGCCCACUCCGGAAACUAAAGUGAGGCUCGCUAACCCUCUAGAUUGCCUCACAGUUGUUUGUUUACЖAAGUAAЖCUPUACAPCCAGGGGAUGAAGAGCACCCACCAGCAGAAGACUUUGCAGAACCUPUAAUUGGAUGUGUUAAGUGUUUUUAAUGAGUGUAUGAAAUGUAGAAAGAUGUACAAGAAAUAAAUUAGGGGAGAUUACUUUGUAUUGUACUGCCAUUCCUACUGUAUUUUUAUACUUUUUGGCAGCAUUAAAUAUUUUUGUUAAAUAGUC
Sequence (SHORT NAMES ENCODING)	GAAUCUAUUAGAAUUUUCUAAAAUGGAGCCCAUUUGUCUUUUCAGUCUUGCAAGUAAAGUCUUUAAAACAAUUAAGCCUCCCAAUGAUUUAACCGUAUUUUCUUACCCCCCCACCCUGAAUAAUAUUUACAAAGAAAUAAUAACGUGAAUUUUUAAAAACCCCGUCCUUCAGUUGUUAUAAAUGAUAGUUCAUUCUUGGUAAGUAUAUCUGUAACAAAAUACUGGGGAAGGACAUGAGGUAUGGUGAACACUUAAAAUUCUGCCAGCCAGCUUAAAUACAUAAUCUAAAUUUAACCCACGUAACACCUCUUCUAGGUAAACAGCAUUCUCCCUAUAUUCAGAUGAGAAAACUGAGUCAAAGAAUAAGUAACUUGCCCAAGAUUGCACAGCUAGUACAUGACAGAACUGAGAUUCACUCUGCAGUCUGUAGACUUCCAGUAACUCCAAACCUCAUACUUUUUCUUUUAUGUUACACGGACUCUGUUUUUAAUGGAAUAUUUAAAUGAGAUAUUUAAGUGGGAAAGUAAUAGACAACCACUCUUACCUGUUAAAAUCCAAAGUAAUUCUCUAGUUUUUAAAUGGAGCACAUUUAAAAAACUUUGUGCACCAGUUUGAACUACCACUGCAACAGAGAAAUACUAGAACAUCAGAGUAUUCUCUAAACCAGAUCAUUACUUCAUUCACUUUGAUUGAAUUGAGUUGCUUAUUUUAAAAAGACUUCUGGAUGCAUGGAAAACAUAUAUAUUUUGCAGCACUCAGAAUCAAUACAAAGUACCUUCAGCCACUUUGGUUCACAUUCUGAAGAUUCAUGUAAUAAACACCCAUAGUAGUUGUGGGCUCACAUUAUCUAAUGAGAAUGUUUUCUUGAUGACUUGACAUUUCUCCGUCACUGUUGGAUAAUCAGAGAAAAAAAGGACGUUCAGAACACCAAGGUGCUUGGUACAAUUAUGCCAAGUGCCCUGUCUUUAAAGGGAGUAGCCUAAUUCUCAGCAUUUGGGAGUUUUUGACUAAAUGUGUGGAUAUGAUUUGUAUUUCCUAUUUCUUAAUAUAUAUGUGAAGAUACAAUACUGACAAGUACUUAGAUUUGGAGGUUUUGCGGUACUGAGGGGAGUUGGGGGAAGAAUGGAAAUACCAUUGACCUCCUAAAAAGUUGUUACUUGCAAAGUUUGGGAGGUGACAUCAAAAACUCAACUGCCCUUACAAUAGUCAUUCCAUCCAUCUGUUGCUUAUUUGAAUUCUCAUUUAUUUUUACUUUAUGGCAUUAAAAUACAAUAAAUCUGUCAAUUAUGUAUUUUAUAUUAGUAGUAGCUUAAGAUUGGGUCACUUCAUUUCGGUAGAUAUAAUUGUUAGUAUUAUCCUUCAGGACAAAAAGCAUCUGCUAACAACCUGUGGUUUAAAAAUAUAGGCCAACUUUAUGUUCAAACAUUAUGUUGAUAAUAUUUUUAGCAGUAUUACACAGUGGAGGUCCAAAUUGGAUUAGACUUUUGCAUUGAAUUCCAAAGUAUUGGUAAGUCUAGCACAUAGUAUAAAGUCUUGCUAAAUUCUUGUGGGUACAUUAUUUUUAAAACCUGUCUGUCUGUCGGUAUCACACAGAGGUCACUUCUUGAGUAAAAUAAGAUGACCUUAAGAAUUCACAUAAUUCUUGAAGAAGAAUAUAAGUCACGAUGCUUCCACAUGAGGCCGCGUCACACCACCAUCGUUUGGAAAUCCAGCACCCCAGCCGUUUUACCCUAAGAUAACAGUGCAGCACUUAGUGUGGUUGAAUGUGUCAUGUGGGAAUGAUUUUUGGUCACCUUUUCAGUUCAUUGUUAGUCCUUUUAUGUUUGUGUGCAUCUAUGUUCGUCUGUGUGUUUGGUAAAUAUGAAUUGAAUAGAUGACUUCUUAUUUUAUGUUUUAGGCCAAGAUUGACAGACACCUAAUAUUCAUGACUUGAGAAUAUUCUGCAGCUAUAAAUUUUGAACCAUUGAUGUGCAAAGCAAGACCUGAAGCCCACUCCGGAAACUAAAGUGAGGCUCGCUAACCCUCUAGAUUGCCUCACAGUUGUUUGUUUACm6AAAGUAAm6ACUYUACAYCCAGGGGAUGAAGAGCACCCACCAGCAGAAGACUUUGCAGAACCUYUAAUUGGAUGUGUUAAGUGUUUUUAAUGAGUGUAUGAAAUGUAGAAAGAUGUACAAGAAAUAAAUUAGGGGAGAUUACUUUGUAUUGUACUGCCAUUCCUACUGUAUUUUUAUACUUUUUGGCAGCAUUAAAUAUUUUUGUUAAAUAGUC
Sequence (MODOMICS CODE ENCODING)	GAAUCUAUUAGAAUUUUCUAAAAUGGAGCCCAUUUGUCUUUUCAGUCUUGCAAGUAAAGUCUUUAAAACAAUUAAGCCUCCCAAUGAUUUAACCGUAUUUUCUUACCCCCCCACCCUGAAUAAUAUUUACAAAGAAAUAAUAACGUGAAUUUUUAAAAACCCCGUCCUUCAGUUGUUAUAAAUGAUAGUUCAUUCUUGGUAAGUAUAUCUGUAACAAAAUACUGGGGAAGGACAUGAGGUAUGGUGAACACUUAAAAUUCUGCCAGCCAGCUUAAAUACAUAAUCUAAAUUUAACCCACGUAACACCUCUUCUAGGUAAACAGCAUUCUCCCUAUAUUCAGAUGAGAAAACUGAGUCAAAGAAUAAGUAACUUGCCCAAGAUUGCACAGCUAGUACAUGACAGAACUGAGAUUCACUCUGCAGUCUGUAGACUUCCAGUAACUCCAAACCUCAUACUUUUUCUUUUAUGUUACACGGACUCUGUUUUUAAUGGAAUAUUUAAAUGAGAUAUUUAAGUGGGAAAGUAAUAGACAACCACUCUUACCUGUUAAAAUCCAAAGUAAUUCUCUAGUUUUUAAAUGGAGCACAUUUAAAAAACUUUGUGCACCAGUUUGAACUACCACUGCAACAGAGAAAUACUAGAACAUCAGAGUAUUCUCUAAACCAGAUCAUUACUUCAUUCACUUUGAUUGAAUUGAGUUGCUUAUUUUAAAAAGACUUCUGGAUGCAUGGAAAACAUAUAUAUUUUGCAGCACUCAGAAUCAAUACAAAGUACCUUCAGCCACUUUGGUUCACAUUCUGAAGAUUCAUGUAAUAAACACCCAUAGUAGUUGUGGGCUCACAUUAUCUAAUGAGAAUGUUUUCUUGAUGACUUGACAUUUCUCCGUCACUGUUGGAUAAUCAGAGAAAAAAAGGACGUUCAGAACACCAAGGUGCUUGGUACAAUUAUGCCAAGUGCCCUGUCUUUAAAGGGAGUAGCCUAAUUCUCAGCAUUUGGGAGUUUUUGACUAAAUGUGUGGAUAUGAUUUGUAUUUCCUAUUUCUUAAUAUAUAUGUGAAGAUACAAUACUGACAAGUACUUAGAUUUGGAGGUUUUGCGGUACUGAGGGGAGUUGGGGGAAGAAUGGAAAUACCAUUGACCUCCUAAAAAGUUGUUACUUGCAAAGUUUGGGAGGUGACAUCAAAAACUCAACUGCCCUUACAAUAGUCAUUCCAUCCAUCUGUUGCUUAUUUGAAUUCUCAUUUAUUUUUACUUUAUGGCAUUAAAAUACAAUAAAUCUGUCAAUUAUGUAUUUUAUAUUAGUAGUAGCUUAAGAUUGGGUCACUUCAUUUCGGUAGAUAUAAUUGUUAGUAUUAUCCUUCAGGACAAAAAGCAUCUGCUAACAACCUGUGGUUUAAAAAUAUAGGCCAACUUUAUGUUCAAACAUUAUGUUGAUAAUAUUUUUAGCAGUAUUACACAGUGGAGGUCCAAAUUGGAUUAGACUUUUGCAUUGAAUUCCAAAGUAUUGGUAAGUCUAGCACAUAGUAUAAAGUCUUGCUAAAUUCUUGUGGGUACAUUAUUUUUAAAACCUGUCUGUCUGUCGGUAUCACACAGAGGUCACUUCUUGAGUAAAAUAAGAUGACCUUAAGAAUUCACAUAAUUCUUGAAGAAGAAUAUAAGUCACGAUGCUUCCACAUGAGGCCGCGUCACACCACCAUCGUUUGGAAAUCCAGCACCCCAGCCGUUUUACCCUAAGAUAACAGUGCAGCACUUAGUGUGGUUGAAUGUGUCAUGUGGGAAUGAUUUUUGGUCACCUUUUCAGUUCAUUGUUAGUCCUUUUAUGUUUGUGUGCAUCUAUGUUCGUCUGUGUGUUUGGUAAAUAUGAAUUGAAUAGAUGACUUCUUAUUUUAUGUUUUAGGCCAAGAUUGACAGACACCUAAUAUUCAUGACUUGAGAAUAUUCUGCAGCUAUAAAUUUUGAACCAUUGAUGUGCAAAGCAAGACCUGAAGCCCACUCCGGAAACUAAAGUGAGGCUCGCUAACCCUCUAGAUUGCCUCACAGUUGUUUGUUUAC2000000006AAAGUAA2000000006ACU2000000009UUACA2000000009UCCAGGGGAUGAAGAGCACCCACCAGCAGAAGACUUUGCAGAACCU2000000009UUAAUUGGAUGUGUUAAGUGUUUUUAAUGAGUGUAUGAAAUGUAGAAAGAUGUACAAGAAAUAAAUUAGGGGAGAUUACUUUGUAUUGUACUGCCAUUCCUACUGUAUUUUUAUACUUUUUGGCAGCAUUAAAUAUUUUUGUUAAAUAGUC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	2053	2060	2063	2068	2114
Modification Positions	m6A	m6A	Y	Y	Y
Genomic Coordinates	18:12785689:-	18:12785682:-	18:12785679:-	18:12785674:-	18:12785628:-
Level of Experimental Evidence	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3kRDPWwiRCgi L6w2k2VEv4EY	Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8