General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000689800
Gene ID:	ENSG00000101596
Gene Name:	SMCHD1
Sequence (UNICHARACTER ENCODING)	UAGAAACAUUGACUGCCUGAAUCUUGAUAAGUGGAUAGCACAUGAAGCCAGUUUGUAUUUUUGUUGUUGUUGUUCACCACUAGAAAACAUAUAAACCCAAACCAAAACUAAGAAAUUAAGUUGUGGUUAUUUCUUGUAAAAACAAAUGAUUUUUGAAUUUGUAAAUACUGGCUUUACCAAAGAAUUCACCACAGGAUUUCUUCAAAUAACCAUCUUAAUUACAUUUACUUUAUCUUGUAUUUAUAUAAUUCAGAGACUAUUUAGCCCCAAUAUUAGGUUGGACUACGUUUUUAUACUUGUUAAAAAUUAGUGUUUUUCUUCAUUCAUUAAUAUAUGUAUACUAUUUCAUUGUAUGGAUGUGCCGUAAUUUACUUGUAUAACUUGUUGAGACAUGUAAGUUUACUACUUUUCAUUAUUAAAACAAUAUUUCCGUAUACAUCGUUCACAUCUGUUACUAUUUUUUCCUGAUUAGAUUCUUAGAAUUGCUGAAUCGUGCAGAAUGUUAAACUUUUUAACACUUGUCCCAUUUCCUUUGAGAAGGGCUGUCCCAGGGCAUAUCAGUACAAGAAGGCCCUUUUUCCAUAGCCCCCCACCAAAGUUGUGUGUGUGUGUGCAUUUUAACAUAUUGAGUAGUAAAAAUAUCUUAUUUGAAUUCCACGUCUCUGGUUACCAAUGAAGUUUAACUUUUAUUUUUUAAUAUUUUCUGAACCUUUUUUGCAAGAACAUUCUUCUAGAUUAUGACGUACUAAAUCCAGUAUUUUUCCUUUAUUCUGACUUCUCUGAAGAAUUUCUUUCUUUUUUUUUUUCUGAGACAGAGUCUCCUGUUGCCCAGGCUGGAGUGCAGUGGUGCGAUCUCAGCUCACUGCAACCUCCGCCUCCUGGAUUCAAGCGAUUCUCCUGCCUCAGCCUCCUGAGUAGCUGGGAUUACAGGCACGUGCCACCAUGCCCAGCUAAUUUUUGUGUUUUUAGUAGAGAUGAGGUUUCAACAUGUUGGUCAGGCUGGUCUCGAACUCCUGACCUCGUGAUCUGCCCACCUUGGCCUCCCAAAGUGCUGGGAUUACAGGUGUGAGCCACCACACCUGACAUUAAGAAUUUAAUUCUUAAUUAACCCUUCAUCUUUUCCCAUCCAUGACUUCAGUUUUUCUACAUUAUUUCAGUUCCCCUAACUCUCAAAUUAUCACCUCUUUAUCUUCCCAUACCUAAAACCAUAGUAUUAUCUUUGGAAGAGUCAGUCUAGUGCUUUCCAGUCUGUAUUUUCUUCAAUGUAAUAUUCUCCUUUUGCUAUCCUUUGGUCAUCUAAAAAACUUAAAUCUAACAGAGGAAACUGGGUUGGUGAUGCUACCUUGAUACUUAACUGCCAUGGGUUCCAAAGCACAGAACUCUCUGGCCUGUCCUCUUCCUUCCACUUAUCAAUCCAUCAUUUACUUUUUUCACUUGCGUUGUCACUGUUCUAGUUUAGGCUGACAUUUGAAAAGUUGUCUAAUUCAUCUCUCUGCCUCUGGAUUUUUCCCUCCAGUUUAUCUUACAUAUUGCUAGUUACUAAGUUUUUGAAAAUACUACUGUGAUCCUGUCAUUUCUAAUCUCAGAAACUUUAAAUUAUUUCUCCUUUUUUGGAGCAGUUGAAAUAAGUUGCUCACUACUUACUAUUCACUUAUUUACAAUAGGUUGUUAAAAUUACACACUGUCCUACACUGCUGACCAGAGAUGGAGAUCGAAUUCGAAGUAAUGGAAAGUUUGGGGGCCUUCAGAAUAAAGCUCCUCCAAUGGAUAAACUUCGGGGAAUGGUAUUUGGAGCUCCAGUUCCAAAACAGUGUCUGAUCUUAGGGGAACAAAUAGAUCUUCUUCAGCAGUAUCGUUCUGCUGUGUGCAAACUAGACAGUGUGAAUAAGGAUCUUAЖCAGUCAAUUAGAGUACCUUCGCACUCCGGAUAUGAGGAAGAAAAAGCAAGAACUUGAUGAACAUGAGAAAAAUCUCAAACUAAUAGAGGAAAAACUAGGUAUGACUCCCAUACGUAAGUGUAAUGACUCAUUGCGUCAUUCACCAAAGGUUGAGACGACAGAUUGUCCAGUUCCUCCUAAAAGAAUGAGACGAGAAGCUACAAGACAAAAUAGGAUUAUAACCAAAACAGAUGUAUGAGAGGUGACAGAGAGAAGAGGCCAUUGGUCUCAGUAAGAAUGCCCUGCUUUCUGCAUCUCUGUUUCAGAAGACCAAGAGGGUGACUUACCAGЖCUGAGUAUUUCUGGGGACAAUACAAGUACCUGGGCAUGAAUUUCCAUUUCGAUUCAGAUGGGЖCUGGAAЖCAACCAUUCAAUUUUAUGAAUCUUACUGGЖCAUUAUGGAUUUACUGGAAUUAUUCCAGACAUUAUGCCCUUUGGUUGUCACUACCUUGCAAAUGUGUAAGAGGAAAAUGUGCUAAUGUGGCAGUGACUGUAAAACUGGCACAUGGCAUUUAUUAAUCCUGAAGAAAAGUACAUGUACUAUUUUUCAGUAUAAAUAUAAUGAACAUGUCAGAACUAUUUCUUGAAAACCUUUUUAUUACUUUUGCGUGAAUUUAUUUAACAAAGAUGUUUUGUCUUUUGUGUAAGGGAGGUUCUAGAGGCUAGAUGUUUAAUUGUAAAUAUGUGAGGAAACUCAAUGCAGAAUUCAGGAUAAAAAUUUUAAAAGCACAGGUAUUUGGGAAUUGAAAUGUUAAGAUACCCAGAACAACAUUAAAUCAAUGAGUGAACUUGUGACAGUGGUAGCAUUUCAAAUUUCAAAAGACUUAUCCUGUGUGUGUGUGUGUGUGUAUAUAUAUAUAUAUAU
Sequence (SHORT NAMES ENCODING)	UAGAAACAUUGACUGCCUGAAUCUUGAUAAGUGGAUAGCACAUGAAGCCAGUUUGUAUUUUUGUUGUUGUUGUUCACCACUAGAAAACAUAUAAACCCAAACCAAAACUAAGAAAUUAAGUUGUGGUUAUUUCUUGUAAAAACAAAUGAUUUUUGAAUUUGUAAAUACUGGCUUUACCAAAGAAUUCACCACAGGAUUUCUUCAAAUAACCAUCUUAAUUACAUUUACUUUAUCUUGUAUUUAUAUAAUUCAGAGACUAUUUAGCCCCAAUAUUAGGUUGGACUACGUUUUUAUACUUGUUAAAAAUUAGUGUUUUUCUUCAUUCAUUAAUAUAUGUAUACUAUUUCAUUGUAUGGAUGUGCCGUAAUUUACUUGUAUAACUUGUUGAGACAUGUAAGUUUACUACUUUUCAUUAUUAAAACAAUAUUUCCGUAUACAUCGUUCACAUCUGUUACUAUUUUUUCCUGAUUAGAUUCUUAGAAUUGCUGAAUCGUGCAGAAUGUUAAACUUUUUAACACUUGUCCCAUUUCCUUUGAGAAGGGCUGUCCCAGGGCAUAUCAGUACAAGAAGGCCCUUUUUCCAUAGCCCCCCACCAAAGUUGUGUGUGUGUGUGCAUUUUAACAUAUUGAGUAGUAAAAAUAUCUUAUUUGAAUUCCACGUCUCUGGUUACCAAUGAAGUUUAACUUUUAUUUUUUAAUAUUUUCUGAACCUUUUUUGCAAGAACAUUCUUCUAGAUUAUGACGUACUAAAUCCAGUAUUUUUCCUUUAUUCUGACUUCUCUGAAGAAUUUCUUUCUUUUUUUUUUUCUGAGACAGAGUCUCCUGUUGCCCAGGCUGGAGUGCAGUGGUGCGAUCUCAGCUCACUGCAACCUCCGCCUCCUGGAUUCAAGCGAUUCUCCUGCCUCAGCCUCCUGAGUAGCUGGGAUUACAGGCACGUGCCACCAUGCCCAGCUAAUUUUUGUGUUUUUAGUAGAGAUGAGGUUUCAACAUGUUGGUCAGGCUGGUCUCGAACUCCUGACCUCGUGAUCUGCCCACCUUGGCCUCCCAAAGUGCUGGGAUUACAGGUGUGAGCCACCACACCUGACAUUAAGAAUUUAAUUCUUAAUUAACCCUUCAUCUUUUCCCAUCCAUGACUUCAGUUUUUCUACAUUAUUUCAGUUCCCCUAACUCUCAAAUUAUCACCUCUUUAUCUUCCCAUACCUAAAACCAUAGUAUUAUCUUUGGAAGAGUCAGUCUAGUGCUUUCCAGUCUGUAUUUUCUUCAAUGUAAUAUUCUCCUUUUGCUAUCCUUUGGUCAUCUAAAAAACUUAAAUCUAACAGAGGAAACUGGGUUGGUGAUGCUACCUUGAUACUUAACUGCCAUGGGUUCCAAAGCACAGAACUCUCUGGCCUGUCCUCUUCCUUCCACUUAUCAAUCCAUCAUUUACUUUUUUCACUUGCGUUGUCACUGUUCUAGUUUAGGCUGACAUUUGAAAAGUUGUCUAAUUCAUCUCUCUGCCUCUGGAUUUUUCCCUCCAGUUUAUCUUACAUAUUGCUAGUUACUAAGUUUUUGAAAAUACUACUGUGAUCCUGUCAUUUCUAAUCUCAGAAACUUUAAAUUAUUUCUCCUUUUUUGGAGCAGUUGAAAUAAGUUGCUCACUACUUACUAUUCACUUAUUUACAAUAGGUUGUUAAAAUUACACACUGUCCUACACUGCUGACCAGAGAUGGAGAUCGAAUUCGAAGUAAUGGAAAGUUUGGGGGCCUUCAGAAUAAAGCUCCUCCAAUGGAUAAACUUCGGGGAAUGGUAUUUGGAGCUCCAGUUCCAAAACAGUGUCUGAUCUUAGGGGAACAAAUAGAUCUUCUUCAGCAGUAUCGUUCUGCUGUGUGCAAACUAGACAGUGUGAAUAAGGAUCUUAm6ACAGUCAAUUAGAGUACCUUCGCACUCCGGAUAUGAGGAAGAAAAAGCAAGAACUUGAUGAACAUGAGAAAAAUCUCAAACUAAUAGAGGAAAAACUAGGUAUGACUCCCAUACGUAAGUGUAAUGACUCAUUGCGUCAUUCACCAAAGGUUGAGACGACAGAUUGUCCAGUUCCUCCUAAAAGAAUGAGACGAGAAGCUACAAGACAAAAUAGGAUUAUAACCAAAACAGAUGUAUGAGAGGUGACAGAGAGAAGAGGCCAUUGGUCUCAGUAAGAAUGCCCUGCUUUCUGCAUCUCUGUUUCAGAAGACCAAGAGGGUGACUUACCAGm6ACUGAGUAUUUCUGGGGACAAUACAAGUACCUGGGCAUGAAUUUCCAUUUCGAUUCAGAUGGGm6ACUGGAAm6ACAACCAUUCAAUUUUAUGAAUCUUACUGGm6ACAUUAUGGAUUUACUGGAAUUAUUCCAGACAUUAUGCCCUUUGGUUGUCACUACCUUGCAAAUGUGUAAGAGGAAAAUGUGCUAAUGUGGCAGUGACUGUAAAACUGGCACAUGGCAUUUAUUAAUCCUGAAGAAAAGUACAUGUACUAUUUUUCAGUAUAAAUAUAAUGAACAUGUCAGAACUAUUUCUUGAAAACCUUUUUAUUACUUUUGCGUGAAUUUAUUUAACAAAGAUGUUUUGUCUUUUGUGUAAGGGAGGUUCUAGAGGCUAGAUGUUUAAUUGUAAAUAUGUGAGGAAACUCAAUGCAGAAUUCAGGAUAAAAAUUUUAAAAGCACAGGUAUUUGGGAAUUGAAAUGUUAAGAUACCCAGAACAACAUUAAAUCAAUGAGUGAACUUGUGACAGUGGUAGCAUUUCAAAUUUCAAAAGACUUAUCCUGUGUGUGUGUGUGUGUGUAUAUAUAUAUAUAUAU
Sequence (MODOMICS CODE ENCODING)	UAGAAACAUUGACUGCCUGAAUCUUGAUAAGUGGAUAGCACAUGAAGCCAGUUUGUAUUUUUGUUGUUGUUGUUCACCACUAGAAAACAUAUAAACCCAAACCAAAACUAAGAAAUUAAGUUGUGGUUAUUUCUUGUAAAAACAAAUGAUUUUUGAAUUUGUAAAUACUGGCUUUACCAAAGAAUUCACCACAGGAUUUCUUCAAAUAACCAUCUUAAUUACAUUUACUUUAUCUUGUAUUUAUAUAAUUCAGAGACUAUUUAGCCCCAAUAUUAGGUUGGACUACGUUUUUAUACUUGUUAAAAAUUAGUGUUUUUCUUCAUUCAUUAAUAUAUGUAUACUAUUUCAUUGUAUGGAUGUGCCGUAAUUUACUUGUAUAACUUGUUGAGACAUGUAAGUUUACUACUUUUCAUUAUUAAAACAAUAUUUCCGUAUACAUCGUUCACAUCUGUUACUAUUUUUUCCUGAUUAGAUUCUUAGAAUUGCUGAAUCGUGCAGAAUGUUAAACUUUUUAACACUUGUCCCAUUUCCUUUGAGAAGGGCUGUCCCAGGGCAUAUCAGUACAAGAAGGCCCUUUUUCCAUAGCCCCCCACCAAAGUUGUGUGUGUGUGUGCAUUUUAACAUAUUGAGUAGUAAAAAUAUCUUAUUUGAAUUCCACGUCUCUGGUUACCAAUGAAGUUUAACUUUUAUUUUUUAAUAUUUUCUGAACCUUUUUUGCAAGAACAUUCUUCUAGAUUAUGACGUACUAAAUCCAGUAUUUUUCCUUUAUUCUGACUUCUCUGAAGAAUUUCUUUCUUUUUUUUUUUCUGAGACAGAGUCUCCUGUUGCCCAGGCUGGAGUGCAGUGGUGCGAUCUCAGCUCACUGCAACCUCCGCCUCCUGGAUUCAAGCGAUUCUCCUGCCUCAGCCUCCUGAGUAGCUGGGAUUACAGGCACGUGCCACCAUGCCCAGCUAAUUUUUGUGUUUUUAGUAGAGAUGAGGUUUCAACAUGUUGGUCAGGCUGGUCUCGAACUCCUGACCUCGUGAUCUGCCCACCUUGGCCUCCCAAAGUGCUGGGAUUACAGGUGUGAGCCACCACACCUGACAUUAAGAAUUUAAUUCUUAAUUAACCCUUCAUCUUUUCCCAUCCAUGACUUCAGUUUUUCUACAUUAUUUCAGUUCCCCUAACUCUCAAAUUAUCACCUCUUUAUCUUCCCAUACCUAAAACCAUAGUAUUAUCUUUGGAAGAGUCAGUCUAGUGCUUUCCAGUCUGUAUUUUCUUCAAUGUAAUAUUCUCCUUUUGCUAUCCUUUGGUCAUCUAAAAAACUUAAAUCUAACAGAGGAAACUGGGUUGGUGAUGCUACCUUGAUACUUAACUGCCAUGGGUUCCAAAGCACAGAACUCUCUGGCCUGUCCUCUUCCUUCCACUUAUCAAUCCAUCAUUUACUUUUUUCACUUGCGUUGUCACUGUUCUAGUUUAGGCUGACAUUUGAAAAGUUGUCUAAUUCAUCUCUCUGCCUCUGGAUUUUUCCCUCCAGUUUAUCUUACAUAUUGCUAGUUACUAAGUUUUUGAAAAUACUACUGUGAUCCUGUCAUUUCUAAUCUCAGAAACUUUAAAUUAUUUCUCCUUUUUUGGAGCAGUUGAAAUAAGUUGCUCACUACUUACUAUUCACUUAUUUACAAUAGGUUGUUAAAAUUACACACUGUCCUACACUGCUGACCAGAGAUGGAGAUCGAAUUCGAAGUAAUGGAAAGUUUGGGGGCCUUCAGAAUAAAGCUCCUCCAAUGGAUAAACUUCGGGGAAUGGUAUUUGGAGCUCCAGUUCCAAAACAGUGUCUGAUCUUAGGGGAACAAAUAGAUCUUCUUCAGCAGUAUCGUUCUGCUGUGUGCAAACUAGACAGUGUGAAUAAGGAUCUUA2000000006ACAGUCAAUUAGAGUACCUUCGCACUCCGGAUAUGAGGAAGAAAAAGCAAGAACUUGAUGAACAUGAGAAAAAUCUCAAACUAAUAGAGGAAAAACUAGGUAUGACUCCCAUACGUAAGUGUAAUGACUCAUUGCGUCAUUCACCAAAGGUUGAGACGACAGAUUGUCCAGUUCCUCCUAAAAGAAUGAGACGAGAAGCUACAAGACAAAAUAGGAUUAUAACCAAAACAGAUGUAUGAGAGGUGACAGAGAGAAGAGGCCAUUGGUCUCAGUAAGAAUGCCCUGCUUUCUGCAUCUCUGUUUCAGAAGACCAAGAGGGUGACUUACCAG2000000006ACUGAGUAUUUCUGGGGACAAUACAAGUACCUGGGCAUGAAUUUCCAUUUCGAUUCAGAUGGG2000000006ACUGGAA2000000006ACAACCAUUCAAUUUUAUGAAUCUUACUGG2000000006ACAUUAUGGAUUUACUGGAAUUAUUCCAGACAUUAUGCCCUUUGGUUGUCACUACCUUGCAAAUGUGUAAGAGGAAAAUGUGCUAAUGUGGCAGUGACUGUAAAACUGGCACAUGGCAUUUAUUAAUCCUGAAGAAAAGUACAUGUACUAUUUUUCAGUAUAAAUAUAAUGAACAUGUCAGAACUAUUUCUUGAAAACCUUUUUAUUACUUUUGCGUGAAUUUAUUUAACAAAGAUGUUUUGUCUUUUGUGUAAGGGAGGUUCUAGAGGCUAGAUGUUUAAUUGUAAAUAUGUGAGGAAACUCAAUGCAGAAUUCAGGAUAAAAAUUUUAAAAGCACAGGUAUUUGGGAAUUGAAAUGUUAAGAUACCCAGAACAACAUUAAAUCAAUGAGUGAACUUGUGACAGUGGUAGCAUUUCAAAUUUCAAAAGACUUAUCCUGUGUGUGUGUGUGUGUGUAUAUAUAUAUAUAUAU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1897	2227	2290	2297	2327
Modification Positions	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	18:2796009:+	18:2802644:+	18:2802707:+	18:2802714:+	18:2802744:+
Level of Experimental Evidence	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq dknfVe6BK8aP	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP	3TeAZFYFxgvp 6UuHp6YApVKv aivdrAsbdKEU jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se ArijeGVTwYBw BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP	BtsJQJ3DteUq dknfVe6BK8aP	Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 8cMbzB4aD5Se ArijeGVTwYBw BkoLW2CBToyL KTLz8piFYdwC nfCHyrYzE6fB BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq