General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000357384
Gene ID:	ENSG00000141425
Gene Name:	RPRD1A
Sequence (UNICHARACTER ENCODING)	UUGCUGGUUUGCGGCCGGUCUUGGAUGAAGCGGCGGCCGUGGUGAGAGCGUGGGGAAGGGUGGGGUGAGGGGGCGAGGCCGCAGCUAGGGCGGCGAAACUCUCCPCCCCUCGGCCCCACCGCGUGGGACGGCGUGAACGUGGUGUCGGAGGGAUGUCAGCCUUCUCUGAGGCGGCGCUGGAGAAGAAGCUGUCGGAGUUGAGCAACUCGCAGCAGAGCGUGCAGACCUUGUCCCUGUGGCUCAUUCACCACCGUAAACACUCGCGUCCCAUCGUCACCGUGUGGGAGCGGGAGCUGCGGAAAGCCAAACCAAACAGGAAGCUUACUUUUCUCUACCUAGCCAAUGAUGUCAUACЖGAACAGCAAGAGGAAGGGGCCAGAGUUUACAAAAGAUUUUGCACCAGUUAUAGUGGAGGCUUUUAAGCAUGUUUCAAGUGAAACUGAUGAAAGUUGUAAGAAGCACCUUGGAAGAGUGUUAUCUAUUUGGGAAGAAAGGUCUGUUUAUGAAAAUGAUGUAUUAGAACAACUUAAЖCAAGCUCUGUAUGGUGAUAAGAAGCCUAGGAAGCGAACUUAUGAЖCAGAUAAAGGUGGAUGAAAAUGAAAACUGUUCCUCUCUGGGAUCUCCAAGUGAЖCCACCACAGACUCUAGAUCUCGUUAGAGCAUUACAAGAUCUGGAAAAUGCAGCCUCAGGUGAUGCAGCAGUUCAUCAGAGGAUAGCUUCUPUACCUGUUGAAGUCCAAGAAGUAUCUCUAUUAGAUAAAAUAACAGAUAAAGAAUCUGGAGAAAGGCUUUCCAAAAUGGUAGAGGAUGCGUGUAUGUUGCUGGCAGAUUACAAUGGCAGAUUGGCGGCAGAAAUAGAUGAUAGAAAGCAACUCACUCGAAUGUUAGCAGAUUUUCUUCGUUGUCAAAAGGAAGCCCUUGCAGAGAAAGAGCAUAAAUUGGAAGAGUACAAGCGCAAGCUAGCCAGAGUUUCCCUGGUGCGCAAAGAACUCAGGUCCCGGAUCCAGAGCCUGCCAGACUUAUCUCGAUUGCCCAAUGUCACUGGCAGCCACAUGCACCUGCCCUUUGCGGGAGACAUCUACAGUGAAGAUUGAUGGACCAGCCUCUUUCCAGGUCCCAGGЖCUUUGCAAGAGAUGGAGACAGUGCAGAGAGCUGUCUGGAGUCACAAUCUGAЖCAGAUUCUCGGGCGCUCCUUCUCUCCUUCCAUCACUACЖGUAAGUAAAAGGACCAUAGAGGGGAACCAGGAAUCUGAGAAUCAGCUGUGCUCAAUAGCCAACCUCCCUGUCCAGAUGCAGCUAUUUUGGUAUCUCCUAUCACAUGCACUCUGAAUCAGGGUUUUUCUAUAAGAAAUCUUUCAGAAUCAGCAAAAGUGGGGAUGACCCAGGCAUCUUGAUUUGCAAAAUCACAAAACUAAGUUGUCAGUUAUCACUGUAGAUGAGCAACUCAUCUUUUUAAAGUAUAGUUACUGAACUGAUUCUGAGAAAUCUPUAGAGAGAAAAAACUCAACAGUACAAAUUAACUAAUUGGGAAAGUUAGAAUGUCCUUUCUGAAUUUUUCAUUAAAAAAAUUACAUUAUCUGAAAUAЖCAUAAAGCUACUAAACUGCUUUGUAUUCUAUUAAGAAAUAGCUCCUAAGGAUGUAGUCUUGUUUCAUAGUUGUUGCACUAUAUCAAAACUUAAAAUGUAAGCCCAGUUCUUCUCUGUAUAGAAAGGAAЖCAUUGUGUUACUUAAUGAAUUAUUUAUACAGAGCAUUUGUUGCCAACUGUUGUUCCAGCCAPCCACACAGGAGUCUGUUCUGAGGUGGCAAUAGCACAUGGGAAGAUGAACUUUCCCUGUUUGUUUACCCGUUCUUCUUU
Sequence (SHORT NAMES ENCODING)	UUGCUGGUUUGCGGCCGGUCUUGGAUGAAGCGGCGGCCGUGGUGAGAGCGUGGGGAAGGGUGGGGUGAGGGGGCGAGGCCGCAGCUAGGGCGGCGAAACUCUCCYCCCCUCGGCCCCACCGCGUGGGACGGCGUGAACGUGGUGUCGGAGGGAUGUCAGCCUUCUCUGAGGCGGCGCUGGAGAAGAAGCUGUCGGAGUUGAGCAACUCGCAGCAGAGCGUGCAGACCUUGUCCCUGUGGCUCAUUCACCACCGUAAACACUCGCGUCCCAUCGUCACCGUGUGGGAGCGGGAGCUGCGGAAAGCCAAACCAAACAGGAAGCUUACUUUUCUCUACCUAGCCAAUGAUGUCAUACm6AGAACAGCAAGAGGAAGGGGCCAGAGUUUACAAAAGAUUUUGCACCAGUUAUAGUGGAGGCUUUUAAGCAUGUUUCAAGUGAAACUGAUGAAAGUUGUAAGAAGCACCUUGGAAGAGUGUUAUCUAUUUGGGAAGAAAGGUCUGUUUAUGAAAAUGAUGUAUUAGAACAACUUAAm6ACAAGCUCUGUAUGGUGAUAAGAAGCCUAGGAAGCGAACUUAUGAm6ACAGAUAAAGGUGGAUGAAAAUGAAAACUGUUCCUCUCUGGGAUCUCCAAGUGAm6ACCACCACAGACUCUAGAUCUCGUUAGAGCAUUACAAGAUCUGGAAAAUGCAGCCUCAGGUGAUGCAGCAGUUCAUCAGAGGAUAGCUUCUYUACCUGUUGAAGUCCAAGAAGUAUCUCUAUUAGAUAAAAUAACAGAUAAAGAAUCUGGAGAAAGGCUUUCCAAAAUGGUAGAGGAUGCGUGUAUGUUGCUGGCAGAUUACAAUGGCAGAUUGGCGGCAGAAAUAGAUGAUAGAAAGCAACUCACUCGAAUGUUAGCAGAUUUUCUUCGUUGUCAAAAGGAAGCCCUUGCAGAGAAAGAGCAUAAAUUGGAAGAGUACAAGCGCAAGCUAGCCAGAGUUUCCCUGGUGCGCAAAGAACUCAGGUCCCGGAUCCAGAGCCUGCCAGACUUAUCUCGAUUGCCCAAUGUCACUGGCAGCCACAUGCACCUGCCCUUUGCGGGAGACAUCUACAGUGAAGAUUGAUGGACCAGCCUCUUUCCAGGUCCCAGGm6ACUUUGCAAGAGAUGGAGACAGUGCAGAGAGCUGUCUGGAGUCACAAUCUGAm6ACAGAUUCUCGGGCGCUCCUUCUCUCCUUCCAUCACUACm6AGUAAGUAAAAGGACCAUAGAGGGGAACCAGGAAUCUGAGAAUCAGCUGUGCUCAAUAGCCAACCUCCCUGUCCAGAUGCAGCUAUUUUGGUAUCUCCUAUCACAUGCACUCUGAAUCAGGGUUUUUCUAUAAGAAAUCUUUCAGAAUCAGCAAAAGUGGGGAUGACCCAGGCAUCUUGAUUUGCAAAAUCACAAAACUAAGUUGUCAGUUAUCACUGUAGAUGAGCAACUCAUCUUUUUAAAGUAUAGUUACUGAACUGAUUCUGAGAAAUCUYUAGAGAGAAAAAACUCAACAGUACAAAUUAACUAAUUGGGAAAGUUAGAAUGUCCUUUCUGAAUUUUUCAUUAAAAAAAUUACAUUAUCUGAAAUAm6ACAUAAAGCUACUAAACUGCUUUGUAUUCUAUUAAGAAAUAGCUCCUAAGGAUGUAGUCUUGUUUCAUAGUUGUUGCACUAUAUCAAAACUUAAAAUGUAAGCCCAGUUCUUCUCUGUAUAGAAAGGAAm6ACAUUGUGUUACUUAAUGAAUUAUUUAUACAGAGCAUUUGUUGCCAACUGUUGUUCCAGCCAYCCACACAGGAGUCUGUUCUGAGGUGGCAAUAGCACAUGGGAAGAUGAACUUUCCCUGUUUGUUUACCCGUUCUUCUUU
Sequence (MODOMICS CODE ENCODING)	UUGCUGGUUUGCGGCCGGUCUUGGAUGAAGCGGCGGCCGUGGUGAGAGCGUGGGGAAGGGUGGGGUGAGGGGGCGAGGCCGCAGCUAGGGCGGCGAAACUCUCC2000000009UCCCCUCGGCCCCACCGCGUGGGACGGCGUGAACGUGGUGUCGGAGGGAUGUCAGCCUUCUCUGAGGCGGCGCUGGAGAAGAAGCUGUCGGAGUUGAGCAACUCGCAGCAGAGCGUGCAGACCUUGUCCCUGUGGCUCAUUCACCACCGUAAACACUCGCGUCCCAUCGUCACCGUGUGGGAGCGGGAGCUGCGGAAAGCCAAACCAAACAGGAAGCUUACUUUUCUCUACCUAGCCAAUGAUGUCAUAC2000000006AGAACAGCAAGAGGAAGGGGCCAGAGUUUACAAAAGAUUUUGCACCAGUUAUAGUGGAGGCUUUUAAGCAUGUUUCAAGUGAAACUGAUGAAAGUUGUAAGAAGCACCUUGGAAGAGUGUUAUCUAUUUGGGAAGAAAGGUCUGUUUAUGAAAAUGAUGUAUUAGAACAACUUAA2000000006ACAAGCUCUGUAUGGUGAUAAGAAGCCUAGGAAGCGAACUUAUGA2000000006ACAGAUAAAGGUGGAUGAAAAUGAAAACUGUUCCUCUCUGGGAUCUCCAAGUGA2000000006ACCACCACAGACUCUAGAUCUCGUUAGAGCAUUACAAGAUCUGGAAAAUGCAGCCUCAGGUGAUGCAGCAGUUCAUCAGAGGAUAGCUUCU2000000009UUACCUGUUGAAGUCCAAGAAGUAUCUCUAUUAGAUAAAAUAACAGAUAAAGAAUCUGGAGAAAGGCUUUCCAAAAUGGUAGAGGAUGCGUGUAUGUUGCUGGCAGAUUACAAUGGCAGAUUGGCGGCAGAAAUAGAUGAUAGAAAGCAACUCACUCGAAUGUUAGCAGAUUUUCUUCGUUGUCAAAAGGAAGCCCUUGCAGAGAAAGAGCAUAAAUUGGAAGAGUACAAGCGCAAGCUAGCCAGAGUUUCCCUGGUGCGCAAAGAACUCAGGUCCCGGAUCCAGAGCCUGCCAGACUUAUCUCGAUUGCCCAAUGUCACUGGCAGCCACAUGCACCUGCCCUUUGCGGGAGACAUCUACAGUGAAGAUUGAUGGACCAGCCUCUUUCCAGGUCCCAGG2000000006ACUUUGCAAGAGAUGGAGACAGUGCAGAGAGCUGUCUGGAGUCACAAUCUGA2000000006ACAGAUUCUCGGGCGCUCCUUCUCUCCUUCCAUCACUAC2000000006AGUAAGUAAAAGGACCAUAGAGGGGAACCAGGAAUCUGAGAAUCAGCUGUGCUCAAUAGCCAACCUCCCUGUCCAGAUGCAGCUAUUUUGGUAUCUCCUAUCACAUGCACUCUGAAUCAGGGUUUUUCUAUAAGAAAUCUUUCAGAAUCAGCAAAAGUGGGGAUGACCCAGGCAUCUUGAUUUGCAAAAUCACAAAACUAAGUUGUCAGUUAUCACUGUAGAUGAGCAACUCAUCUUUUUAAAGUAUAGUUACUGAACUGAUUCUGAGAAAUCU2000000009UUAGAGAGAAAAAACUCAACAGUACAAAUUAACUAAUUGGGAAAGUUAGAAUGUCCUUUCUGAAUUUUUCAUUAAAAAAAUUACAUUAUCUGAAAUA2000000006ACAUAAAGCUACUAAACUGCUUUGUAUUCUAUUAAGAAAUAGCUCCUAAGGAUGUAGUCUUGUUUCAUAGUUGUUGCACUAUAUCAAAACUUAAAAUGUAAGCCCAGUUCUUCUCUGUAUAGAAAGGAA2000000006ACAUUGUGUUACUUAAUGAAUUAUUUAUACAGAGCAUUUGUUGCCAACUGUUGUUCCAGCCA2000000009UCCACACAGGAGUCUGUUCUGAGGUGGCAAUAGCACAUGGGAAGAUGAACUUUCCCUGUUUGUUUACCCGUUCUUCUUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	105	355	530	575	629	720	1119	1171	1210	1484	1581	1710	1772
Modification Positions	Y	m6A	m6A	m6A	m6A	Y	m6A	m6A	m6A	Y	m6A	m6A	Y
Genomic Coordinates	18:36067452:-	18:36033786:-	18:36031001:-	18:36030871:-	18:36030817:-	18:36027229:-	18:35993123:-	18:35990565:-	18:35990526:-	18:35990252:-	18:35990155:-	18:35990026:-	18:35989964:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn D6ncpa2PPWj3 nfCHyrYzE6fB KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8