General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000329198
Gene ID:	ENSG00000183072
Gene Name:	NKX2-5
Sequence (UNICHARACTER ENCODING)	ACAUCCAGAGCUGGCCGACGGGUGCGCGGGCGGGCGGCGGCACCAUGCAGGGAAGCUGCCAGGGGCCGUGGGCAGCGCCGCUUUCUGCCGCCCACCUGGCGCUGUGAGACUGGCGCUGCCACCAUGUUCCCCAGCCCUGCUCUCACGCCCACGCCCUUCUCAGUCAAAGACAPCCUAAACCUGGAACAGCAGCAGCGCAGCCUGGCUGCCGCCGGAGAGCUCUCUGCCCGCCUGGAGGCGACCCUGGCGCCCUCCUCCUGCAUGCUGGCCGCCUUCAAGCCAGAGGCCUACGCUGGGCCCGAGGCGGCUGCGCCGGGCCUCCCAGAGCUGCGCGCAGAGCUGGGCCGCGCGCCUUCACCGGCCAAGUGUGCGUCUGCCUUUCCCGCCGCCCCCGCCUUCUAUCCACGUGCCUACAGCGACCCCGACCCAGCCAAGGACCCUAGAGCCGAAAAGAAAGAGCUGUGCGCGCUGCAGAAGGCGGUGGAGCUGGAGAAGACAGAGGCGGACAACGCGGAGCGGCCCCGGGCGCGACGGCGGAGGAAGCCGCGCGUGCUCUUCUCGCAGGCGCAGGUCUAUGAGCUGGAGCGGCGCUUCAAGCAGCAGCGGUACCUGUCGGCCCCCGAACGCGACCAGCUGGCCAGCGUGCUGAAACUCACGUCCACGCAGGUCAAGAUCUGGUUCCAGAACCGGCGCUACЖAGUGCAAGCGGCAGCGGCAGGЖCCAGЖCUCUGGAGCUGGUGGGGCUGCCCCCGCCGCCGCCGCCGCCUGCCCGCAGGAUCGCGGUGCCAGUGCUGGUGCGCGAUGGCAAGCCAUGCCUAGGGGЖCUCGGCGCCCUACGCGCCUGCCUACGGCGUGGGCCUCAAUCCCUACGGUUAUAACGCCUACCCCGCCUAUCCGGGUUACGGCGGCGCGGCCUGCAGCCCUGGCUACAGCUGCACUGCCGCUUACCCCGCCGGGCCUUCCCCAGCGCAGCCGGCCACUGCCGCCGCCAACAACAACUUCGUGAЖCUUCGGCGUCGGGGЖCUUGAAUGCGGUUCAGAGCCCCGGGAUUCCGCAGAGCAACUCGGGAGUGUCCACGCUGCAUGGUAUCCGAGCCUGGUAGGGAAGGGACCCGCGUGGCGCGACCCUGACCGAUCCCACCUCAACAGCUCCCUGЖCUCUCGGGGGGAGAAGGGGCUCCCAACAUGACCCUGAGUCCCCUGGAUUUUGCAUUCACUCCUGCGGAGACCUAGGAЖCUUUUUCUGUCCCACGCGCGUUUGUUCUUGCGCACGGGAGAGUUUGUGGCGGCGAUUAUGCAGCGUGCAAUGAGUGAUCCUGCAGCCUGGUGUCUUAGCUGUCCCCCCAGGAGUGCCCUCCGAGAGUCCAUGGGCACCCCCGGUUGGAЖCUGGGЖCUGAGCUCGGGCACGCAGGGCCUGAGAUCUGGCCGCCCAUUCCGCGAGCCAGGGCCGGGCGCCCGGGCCUUUGCUAUCUCGCCGUCGCCCGCCCACGCACCCACCCGUAUUUAUGUUUUUACCUAUUGCUGUAAGAAAUGACGAUCCCCUUCCCAUUAAAGAGAGUGCGUUGA
Sequence (SHORT NAMES ENCODING)	ACAUCCAGAGCUGGCCGACGGGUGCGCGGGCGGGCGGCGGCACCAUGCAGGGAAGCUGCCAGGGGCCGUGGGCAGCGCCGCUUUCUGCCGCCCACCUGGCGCUGUGAGACUGGCGCUGCCACCAUGUUCCCCAGCCCUGCUCUCACGCCCACGCCCUUCUCAGUCAAAGACAYCCUAAACCUGGAACAGCAGCAGCGCAGCCUGGCUGCCGCCGGAGAGCUCUCUGCCCGCCUGGAGGCGACCCUGGCGCCCUCCUCCUGCAUGCUGGCCGCCUUCAAGCCAGAGGCCUACGCUGGGCCCGAGGCGGCUGCGCCGGGCCUCCCAGAGCUGCGCGCAGAGCUGGGCCGCGCGCCUUCACCGGCCAAGUGUGCGUCUGCCUUUCCCGCCGCCCCCGCCUUCUAUCCACGUGCCUACAGCGACCCCGACCCAGCCAAGGACCCUAGAGCCGAAAAGAAAGAGCUGUGCGCGCUGCAGAAGGCGGUGGAGCUGGAGAAGACAGAGGCGGACAACGCGGAGCGGCCCCGGGCGCGACGGCGGAGGAAGCCGCGCGUGCUCUUCUCGCAGGCGCAGGUCUAUGAGCUGGAGCGGCGCUUCAAGCAGCAGCGGUACCUGUCGGCCCCCGAACGCGACCAGCUGGCCAGCGUGCUGAAACUCACGUCCACGCAGGUCAAGAUCUGGUUCCAGAACCGGCGCUACm6AAGUGCAAGCGGCAGCGGCAGGm6ACCAGm6ACUCUGGAGCUGGUGGGGCUGCCCCCGCCGCCGCCGCCGCCUGCCCGCAGGAUCGCGGUGCCAGUGCUGGUGCGCGAUGGCAAGCCAUGCCUAGGGGm6ACUCGGCGCCCUACGCGCCUGCCUACGGCGUGGGCCUCAAUCCCUACGGUUAUAACGCCUACCCCGCCUAUCCGGGUUACGGCGGCGCGGCCUGCAGCCCUGGCUACAGCUGCACUGCCGCUUACCCCGCCGGGCCUUCCCCAGCGCAGCCGGCCACUGCCGCCGCCAACAACAACUUCGUGAm6ACUUCGGCGUCGGGGm6ACUUGAAUGCGGUUCAGAGCCCCGGGAUUCCGCAGAGCAACUCGGGAGUGUCCACGCUGCAUGGUAUCCGAGCCUGGUAGGGAAGGGACCCGCGUGGCGCGACCCUGACCGAUCCCACCUCAACAGCUCCCUGm6ACUCUCGGGGGGAGAAGGGGCUCCCAACAUGACCCUGAGUCCCCUGGAUUUUGCAUUCACUCCUGCGGAGACCUAGGAm6ACUUUUUCUGUCCCACGCGCGUUUGUUCUUGCGCACGGGAGAGUUUGUGGCGGCGAUUAUGCAGCGUGCAAUGAGUGAUCCUGCAGCCUGGUGUCUUAGCUGUCCCCCCAGGAGUGCCCUCCGAGAGUCCAUGGGCACCCCCGGUUGGAm6ACUGGGm6ACUGAGCUCGGGCACGCAGGGCCUGAGAUCUGGCCGCCCAUUCCGCGAGCCAGGGCCGGGCGCCCGGGCCUUUGCUAUCUCGCCGUCGCCCGCCCACGCACCCACCCGUAUUUAUGUUUUUACCUAUUGCUGUAAGAAAUGACGAUCCCCUUCCCAUUAAAGAGAGUGCGUUGA
Sequence (MODOMICS CODE ENCODING)	ACAUCCAGAGCUGGCCGACGGGUGCGCGGGCGGGCGGCGGCACCAUGCAGGGAAGCUGCCAGGGGCCGUGGGCAGCGCCGCUUUCUGCCGCCCACCUGGCGCUGUGAGACUGGCGCUGCCACCAUGUUCCCCAGCCCUGCUCUCACGCCCACGCCCUUCUCAGUCAAAGACA2000000009UCCUAAACCUGGAACAGCAGCAGCGCAGCCUGGCUGCCGCCGGAGAGCUCUCUGCCCGCCUGGAGGCGACCCUGGCGCCCUCCUCCUGCAUGCUGGCCGCCUUCAAGCCAGAGGCCUACGCUGGGCCCGAGGCGGCUGCGCCGGGCCUCCCAGAGCUGCGCGCAGAGCUGGGCCGCGCGCCUUCACCGGCCAAGUGUGCGUCUGCCUUUCCCGCCGCCCCCGCCUUCUAUCCACGUGCCUACAGCGACCCCGACCCAGCCAAGGACCCUAGAGCCGAAAAGAAAGAGCUGUGCGCGCUGCAGAAGGCGGUGGAGCUGGAGAAGACAGAGGCGGACAACGCGGAGCGGCCCCGGGCGCGACGGCGGAGGAAGCCGCGCGUGCUCUUCUCGCAGGCGCAGGUCUAUGAGCUGGAGCGGCGCUUCAAGCAGCAGCGGUACCUGUCGGCCCCCGAACGCGACCAGCUGGCCAGCGUGCUGAAACUCACGUCCACGCAGGUCAAGAUCUGGUUCCAGAACCGGCGCUAC2000000006AAGUGCAAGCGGCAGCGGCAGG2000000006ACCAG2000000006ACUCUGGAGCUGGUGGGGCUGCCCCCGCCGCCGCCGCCGCCUGCCCGCAGGAUCGCGGUGCCAGUGCUGGUGCGCGAUGGCAAGCCAUGCCUAGGGG2000000006ACUCGGCGCCCUACGCGCCUGCCUACGGCGUGGGCCUCAAUCCCUACGGUUAUAACGCCUACCCCGCCUAUCCGGGUUACGGCGGCGCGGCCUGCAGCCCUGGCUACAGCUGCACUGCCGCUUACCCCGCCGGGCCUUCCCCAGCGCAGCCGGCCACUGCCGCCGCCAACAACAACUUCGUGA2000000006ACUUCGGCGUCGGGG2000000006ACUUGAAUGCGGUUCAGAGCCCCGGGAUUCCGCAGAGCAACUCGGGAGUGUCCACGCUGCAUGGUAUCCGAGCCUGGUAGGGAAGGGACCCGCGUGGCGCGACCCUGACCGAUCCCACCUCAACAGCUCCCUG2000000006ACUCUCGGGGGGAGAAGGGGCUCCCAACAUGACCCUGAGUCCCCUGGAUUUUGCAUUCACUCCUGCGGAGACCUAGGA2000000006ACUUUUUCUGUCCCACGCGCGUUUGUUCUUGCGCACGGGAGAGUUUGUGGCGGCGAUUAUGCAGCGUGCAAUGAGUGAUCCUGCAGCCUGGUGUCUUAGCUGUCCCCCCAGGAGUGCCCUCCGAGAGUCCAUGGGCACCCCCGGUUGGA2000000006ACUGGG2000000006ACUGAGCUCGGGCACGCAGGGCCUGAGAUCUGGCCGCCCAUUCCGCGAGCCAGGGCCGGGCGCCCGGGCCUUUGCUAUCUCGCCGUCGCCCGCCCACGCACCCACCCGUAUUUAUGUUUUUACCUAUUGCUGUAAGAAAUGACGAUCCCCUUCCCAUUAAAGAGAGUGCGUUGA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	173	697	719	724	821	1004	1019	1152	1230	1379	1385
Modification Positions	Y	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	5:173235034:-	5:173232970:-	5:173232948:-	5:173232943:-	5:173232846:-	5:173232663:-	5:173232648:-	5:173232515:-	5:173232437:-	5:173232288:-	5:173232282:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL	gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	5Nnepx5V7yHo aHkqKEJkRYyb gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL BkoLW2CBToyL BtsJQJ3DteUq S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	5Nnepx5V7yHo aHkqKEJkRYyb gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	aHkqKEJkRYyb msuJfBpJvM5H NjZ8bGGJsNSR VyCX26p5UBRL BtsJQJ3DteUq iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 5aTkEfEpX8Xm 5Nnepx5V7yHo aHkqKEJkRYyb gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR VyCX26p5UBRL dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 ZuM5xpZmNuDL BtsJQJ3DteUq iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	5Nnepx5V7yHo aHkqKEJkRYyb msuJfBpJvM5H NjZ8bGGJsNSR VyCX26p5UBRL BtsJQJ3DteUq iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo aHkqKEJkRYyb msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	5Nnepx5V7yHo aHkqKEJkRYyb gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR VyCX26p5UBRL 834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 ZuM5xpZmNuDL BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8