General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000657194
Gene ID:	ENSG00000248275
Gene Name:	TRIM52-AS1
Sequence (UNICHARACTER ENCODING)	ACGCUCUGGAGAGACGCUCUAGGCCGGCGGAGGACCACGUCUCUAUGGUGUGCCGGGGGCCGCGCGGGCCGGGAGUUGGGUGGGCUGGGGGACAGGCGCGCCCGCGCCGCCCGCUCCAGCUGGGCUAGUGCUGCACAUUCCGGCCAGCCCCPCCUCAAGACCCCAUUCCCAAGCCCCUUCUCAGCUCCCUCGGGCCGGCAGAGCGGCUCUGAUCAGUAAAAUGCUGUUGAAGGCCCACGGGCAUGACUGCACCCCUCACUAAUUGGUCAUUGGUUUGGGGAGGACACCACUGUCCCAGUGGAACCUUGAGCACACCUUGGAGCCCUCCUCUUCCUCUCCGGACCUGUGCCAAACUGUGAGUGGCACAGAGCAAGGЖCUGUAUGUGUUCUCUUCUUUGUUGCAUACUCAGUUCCUUGACCACAGUGCCAAGCACACAGCGAGCACUCCCUGUGUAUCUGCUGAGUAAAUAAACGAAUGAЖCAAACCCAACACAUUUCAGCCAAGUCCUGCUGAUGUUUCUCCPCCGAUCUAGCUCCUCCUUUCCAGCCUUACUUCUGCCACUCCAGAUUUCACCCCCAUCAGCUUCAGЖCUGGAUAAAAGGAAACCAUUUCUCUAAAGGAUCACUUGCUCUCUCAUUUCAGGCCAPCCUGCAGCCACCAGAACCUUCCACAUGAAAUGAAAGGCUCACCACUUCAUAGGCUPUAAGGAAAUUCUUGGCCAGGUGUGGUGCCUCACUCAUGUAAUCCCAGUGCUPUAAGAGGCCAAGAUGGGAGGЖUUGUUUGAGCCAGCUGUUUGAGЖCCAGCCUGGGCAACGUCAUGAGACCCCAUCUCCACAAAAAAAAAAAAAAAGAAAAUUGGCUGGGUGCGGUGGCUCAUGUCUGUAAUCCCAGCAAUUUUGGAGGCUGAGGCGGGUGGAUCACUUGAGGUCAGGAGUUUGAGACCAGCCUGGCCAACAUGGUGAAACCCCGUCACUACUAAAAAUACAAAAAUUAGCCAGGCGUGGCGGCAGGUGCCUGUAAUCCCAGCUACUUGCGAGGCUGAGGAAGAAUUGCGUGAACCUAGGAGGUGGAGGUUGCAGUGAGCCAAGAUCAUGCUGCUGCACUCCAGCCUGGGCAACAGAGUGAGACUCCAUCUCAAAAAUAAUAAAAAUAAAUUAAAAAAAUUAAAAAUUA
Sequence (SHORT NAMES ENCODING)	ACGCUCUGGAGAGACGCUCUAGGCCGGCGGAGGACCACGUCUCUAUGGUGUGCCGGGGGCCGCGCGGGCCGGGAGUUGGGUGGGCUGGGGGACAGGCGCGCCCGCGCCGCCCGCUCCAGCUGGGCUAGUGCUGCACAUUCCGGCCAGCCCCYCCUCAAGACCCCAUUCCCAAGCCCCUUCUCAGCUCCCUCGGGCCGGCAGAGCGGCUCUGAUCAGUAAAAUGCUGUUGAAGGCCCACGGGCAUGACUGCACCCCUCACUAAUUGGUCAUUGGUUUGGGGAGGACACCACUGUCCCAGUGGAACCUUGAGCACACCUUGGAGCCCUCCUCUUCCUCUCCGGACCUGUGCCAAACUGUGAGUGGCACAGAGCAAGGm6ACUGUAUGUGUUCUCUUCUUUGUUGCAUACUCAGUUCCUUGACCACAGUGCCAAGCACACAGCGAGCACUCCCUGUGUAUCUGCUGAGUAAAUAAACGAAUGAm6ACAAACCCAACACAUUUCAGCCAAGUCCUGCUGAUGUUUCUCCYCCGAUCUAGCUCCUCCUUUCCAGCCUUACUUCUGCCACUCCAGAUUUCACCCCCAUCAGCUUCAGm6ACUGGAUAAAAGGAAACCAUUUCUCUAAAGGAUCACUUGCUCUCUCAUUUCAGGCCAYCCUGCAGCCACCAGAACCUUCCACAUGAAAUGAAAGGCUCACCACUUCAUAGGCUYUAAGGAAAUUCUUGGCCAGGUGUGGUGCCUCACUCAUGUAAUCCCAGUGCUYUAAGAGGCCAAGAUGGGAGGm6AUUGUUUGAGCCAGCUGUUUGAGm6ACCAGCCUGGGCAACGUCAUGAGACCCCAUCUCCACAAAAAAAAAAAAAAAGAAAAUUGGCUGGGUGCGGUGGCUCAUGUCUGUAAUCCCAGCAAUUUUGGAGGCUGAGGCGGGUGGAUCACUUGAGGUCAGGAGUUUGAGACCAGCCUGGCCAACAUGGUGAAACCCCGUCACUACUAAAAAUACAAAAAUUAGCCAGGCGUGGCGGCAGGUGCCUGUAAUCCCAGCUACUUGCGAGGCUGAGGAAGAAUUGCGUGAACCUAGGAGGUGGAGGUUGCAGUGAGCCAAGAUCAUGCUGCUGCACUCCAGCCUGGGCAACAGAGUGAGACUCCAUCUCAAAAAUAAUAAAAAUAAAUUAAAAAAAUUAAAAAUUA
Sequence (MODOMICS CODE ENCODING)	ACGCUCUGGAGAGACGCUCUAGGCCGGCGGAGGACCACGUCUCUAUGGUGUGCCGGGGGCCGCGCGGGCCGGGAGUUGGGUGGGCUGGGGGACAGGCGCGCCCGCGCCGCCCGCUCCAGCUGGGCUAGUGCUGCACAUUCCGGCCAGCCCC2000000009UCCUCAAGACCCCAUUCCCAAGCCCCUUCUCAGCUCCCUCGGGCCGGCAGAGCGGCUCUGAUCAGUAAAAUGCUGUUGAAGGCCCACGGGCAUGACUGCACCCCUCACUAAUUGGUCAUUGGUUUGGGGAGGACACCACUGUCCCAGUGGAACCUUGAGCACACCUUGGAGCCCUCCUCUUCCUCUCCGGACCUGUGCCAAACUGUGAGUGGCACAGAGCAAGG2000000006ACUGUAUGUGUUCUCUUCUUUGUUGCAUACUCAGUUCCUUGACCACAGUGCCAAGCACACAGCGAGCACUCCCUGUGUAUCUGCUGAGUAAAUAAACGAAUGA2000000006ACAAACCCAACACAUUUCAGCCAAGUCCUGCUGAUGUUUCUCC2000000009UCCGAUCUAGCUCCUCCUUUCCAGCCUUACUUCUGCCACUCCAGAUUUCACCCCCAUCAGCUUCAG2000000006ACUGGAUAAAAGGAAACCAUUUCUCUAAAGGAUCACUUGCUCUCUCAUUUCAGGCCA2000000009UCCUGCAGCCACCAGAACCUUCCACAUGAAAUGAAAGGCUCACCACUUCAUAGGCU2000000009UUAAGGAAAUUCUUGGCCAGGUGUGGUGCCUCACUCAUGUAAUCCCAGUGCU2000000009UUAAGAGGCCAAGAUGGGAGG2000000006AUUGUUUGAGCCAGCUGUUUGAG2000000006ACCAGCCUGGGCAACGUCAUGAGACCCCAUCUCCACAAAAAAAAAAAAAAAGAAAAUUGGCUGGGUGCGGUGGCUCAUGUCUGUAAUCCCAGCAAUUUUGGAGGCUGAGGCGGGUGGAUCACUUGAGGUCAGGAGUUUGAGACCAGCCUGGCCAACAUGGUGAAACCCCGUCACUACUAAAAAUACAAAAAUUAGCCAGGCGUGGCGGCAGGUGCCUGUAAUCCCAGCUACUUGCGAGGCUGAGGAAGAAUUGCGUGAACCUAGGAGGUGGAGGUUGCAGUGAGCCAAGAUCAUGCUGCUGCACUCCAGCCUGGGCAACAGAGUGAGACUCCAUCUCAAAAAUAAUAAAAAUAAAUUAAAAAAAUUAAAAAUUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	152	376	479	522	588	645	701	753	774	797
Modification Positions	Y	m6A	m6A	Y	m6A	Y	Y	Y	m6A	m6A
Genomic Coordinates	5:181261320:+	5:181263787:+	5:181263890:+	5:181263933:+	5:181263999:+	5:181264056:+	5:181264112:+	5:181264164:+	5:181264185:+	5:181264208:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 JkWoGWVwjNda Yfn77uLS5tv8	4HMi5ykupT9V 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se 93arJtwJmuS9 BkoLW2CBToyL BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	5Nnepx5V7yHo 6UuHp6YApVKv aHkqKEJkRYyb gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8	6UuHp6YApVKv gBgcfFQ5WN9C jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL	BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8