General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000510362
Gene ID:	ENSG00000154153
Gene Name:	RETREG1
Sequence (UNICHARACTER ENCODING)	AGUGUCAGGCUGCCCCUAAGGACAGGGAAGUCCUGGGGAGAAAGCGUUUUGCCCAGAUGAACACGUGAACUCAACAUUCGUGUGCAUGCUUCCGCUGGGAAGUUAUCAAUUCCAAACCAGAUGAAAGACCCAGGCUCAGCCACUGUAUUGCAGAAUCAUGGAUGAAUUUCAGCAUAUUUCUUCAAGAAAUGUCUCUUUUUAAACAGCAGAGCCCUGGCAAGUUUUGUCUCCUGGUCUGUAGUGUGUGCACAUUUUUUACGAUCUUGGGAAGUUACAUUCCUGGGGUUAUACUCAGCUAUCUACUGUUACUGUGUGCAUUUUUGUGUCCAUUGUUUAAAUGUAAUGAUAUUGGACAAAAAAUUUACAGCAAAAUUAAGUCAGUUCUGCUGAAACUGGAUUUUGGAAUUGGAGAAUAUAUUAAUCAGAAGAAACGUGAGAGAUCUGAAGCAGACAAAGAAAAAAGUCACAAAGAUGACAGUGAAUUAGACUUUUCAGCUCUUUGUCCUAAGAUUAGCCUCACGGUUGCUGCCAAAGAGUUAUCUGUGUCUGACACAGACGUCUCAGAGGUAUCCUGGACUGAUAAUGGGACCUUCAACCUUUCAGAAGGAUACACUCCACAGACAGACACUUCUGAUGAUCUUGACCGACCCAGUGAGGAAGUUUUCUCUAGAGAUCUUUCAGAUUUUCCAUCUCUAGAAAAUGGCAUGGGAACAAAUGAUGAAGAUGAAUUAAGCCUUGGUUUGCCCACUGAGCUCAAGAGAAAGAAGGAACAGUUGGACAGUGGUCACAGACCAAGCAAAGAGЖCGCAAUCAGCAGCUGGUCUCACCCUUCCUCUGAЖCAGUGACCAAACCUUUCACCUGAUGAGCAACCUGGCUGGGGAUGUUAUCACAGCUGCAGUGACUGCAGCUAUCAAAGЖCCAGUUAGAGGGUGUGCAGCAAGCACUUUCUCAGGCUGCCCCCAUCCCAGAAGAGGACACAGACACUGAAGAAGGUGAUGACUUUGAЖCUACUUGACCAGUCAGAGCUGGAUCAAAUUGAGAGUGAAUUGGGACUUACACAAGACCAGGAAGCAGAAGCACAGCAAAAUAAGAAGUCUUCAGGUUUCCUUUCAAAUCUGCUGGGAGGCCAUUAAUCUAGGAAUCAGCUUGCAACAGAGCACAAAAAACACCAAAAAAAUUUCAAACAAGAAAAAAAAAAAAAAAAGGAAAAGAAAAAAAUUGAЖCUGUAUUAAAAUAUCUGGACUGAGUUUUGCCAAAUGUUAAAGGGAGAAGAGUUACUGAAGACUUUGAACACUUGCUUUUUGUGAUUGCUUAUGUCAUUAGUGCCUCAUGACUGUGUUUGAUGUCCUUUAUUGAUACAAAGUGAGCCUGUGCCUUCAUUAUCUUGCCCAUUUUAAUACAAAUGGAAACCUGGUGUUUGAAAAUCUCUGAACUGUGUGGGUUUUGGAGGAAUAUACCUGAAUUUUAUUCAAUAACAGUUUCUGGACAGGAAGAAAAAUACAGUUACAUAUUUAUAAAAUAGUCGUUAUCAGUA
Sequence (SHORT NAMES ENCODING)	AGUGUCAGGCUGCCCCUAAGGACAGGGAAGUCCUGGGGAGAAAGCGUUUUGCCCAGAUGAACACGUGAACUCAACAUUCGUGUGCAUGCUUCCGCUGGGAAGUUAUCAAUUCCAAACCAGAUGAAAGACCCAGGCUCAGCCACUGUAUUGCAGAAUCAUGGAUGAAUUUCAGCAUAUUUCUUCAAGAAAUGUCUCUUUUUAAACAGCAGAGCCCUGGCAAGUUUUGUCUCCUGGUCUGUAGUGUGUGCACAUUUUUUACGAUCUUGGGAAGUUACAUUCCUGGGGUUAUACUCAGCUAUCUACUGUUACUGUGUGCAUUUUUGUGUCCAUUGUUUAAAUGUAAUGAUAUUGGACAAAAAAUUUACAGCAAAAUUAAGUCAGUUCUGCUGAAACUGGAUUUUGGAAUUGGAGAAUAUAUUAAUCAGAAGAAACGUGAGAGAUCUGAAGCAGACAAAGAAAAAAGUCACAAAGAUGACAGUGAAUUAGACUUUUCAGCUCUUUGUCCUAAGAUUAGCCUCACGGUUGCUGCCAAAGAGUUAUCUGUGUCUGACACAGACGUCUCAGAGGUAUCCUGGACUGAUAAUGGGACCUUCAACCUUUCAGAAGGAUACACUCCACAGACAGACACUUCUGAUGAUCUUGACCGACCCAGUGAGGAAGUUUUCUCUAGAGAUCUUUCAGAUUUUCCAUCUCUAGAAAAUGGCAUGGGAACAAAUGAUGAAGAUGAAUUAAGCCUUGGUUUGCCCACUGAGCUCAAGAGAAAGAAGGAACAGUUGGACAGUGGUCACAGACCAAGCAAAGAGm6ACGCAAUCAGCAGCUGGUCUCACCCUUCCUCUGAm6ACAGUGACCAAACCUUUCACCUGAUGAGCAACCUGGCUGGGGAUGUUAUCACAGCUGCAGUGACUGCAGCUAUCAAAGm6ACCAGUUAGAGGGUGUGCAGCAAGCACUUUCUCAGGCUGCCCCCAUCCCAGAAGAGGACACAGACACUGAAGAAGGUGAUGACUUUGAm6ACUACUUGACCAGUCAGAGCUGGAUCAAAUUGAGAGUGAAUUGGGACUUACACAAGACCAGGAAGCAGAAGCACAGCAAAAUAAGAAGUCUUCAGGUUUCCUUUCAAAUCUGCUGGGAGGCCAUUAAUCUAGGAAUCAGCUUGCAACAGAGCACAAAAAACACCAAAAAAAUUUCAAACAAGAAAAAAAAAAAAAAAAGGAAAAGAAAAAAAUUGAm6ACUGUAUUAAAAUAUCUGGACUGAGUUUUGCCAAAUGUUAAAGGGAGAAGAGUUACUGAAGACUUUGAACACUUGCUUUUUGUGAUUGCUUAUGUCAUUAGUGCCUCAUGACUGUGUUUGAUGUCCUUUAUUGAUACAAAGUGAGCCUGUGCCUUCAUUAUCUUGCCCAUUUUAAUACAAAUGGAAACCUGGUGUUUGAAAAUCUCUGAACUGUGUGGGUUUUGGAGGAAUAUACCUGAAUUUUAUUCAAUAACAGUUUCUGGACAGGAAGAAAAAUACAGUUACAUAUUUAUAAAAUAGUCGUUAUCAGUA
Sequence (MODOMICS CODE ENCODING)	AGUGUCAGGCUGCCCCUAAGGACAGGGAAGUCCUGGGGAGAAAGCGUUUUGCCCAGAUGAACACGUGAACUCAACAUUCGUGUGCAUGCUUCCGCUGGGAAGUUAUCAAUUCCAAACCAGAUGAAAGACCCAGGCUCAGCCACUGUAUUGCAGAAUCAUGGAUGAAUUUCAGCAUAUUUCUUCAAGAAAUGUCUCUUUUUAAACAGCAGAGCCCUGGCAAGUUUUGUCUCCUGGUCUGUAGUGUGUGCACAUUUUUUACGAUCUUGGGAAGUUACAUUCCUGGGGUUAUACUCAGCUAUCUACUGUUACUGUGUGCAUUUUUGUGUCCAUUGUUUAAAUGUAAUGAUAUUGGACAAAAAAUUUACAGCAAAAUUAAGUCAGUUCUGCUGAAACUGGAUUUUGGAAUUGGAGAAUAUAUUAAUCAGAAGAAACGUGAGAGAUCUGAAGCAGACAAAGAAAAAAGUCACAAAGAUGACAGUGAAUUAGACUUUUCAGCUCUUUGUCCUAAGAUUAGCCUCACGGUUGCUGCCAAAGAGUUAUCUGUGUCUGACACAGACGUCUCAGAGGUAUCCUGGACUGAUAAUGGGACCUUCAACCUUUCAGAAGGAUACACUCCACAGACAGACACUUCUGAUGAUCUUGACCGACCCAGUGAGGAAGUUUUCUCUAGAGAUCUUUCAGAUUUUCCAUCUCUAGAAAAUGGCAUGGGAACAAAUGAUGAAGAUGAAUUAAGCCUUGGUUUGCCCACUGAGCUCAAGAGAAAGAAGGAACAGUUGGACAGUGGUCACAGACCAAGCAAAGAG2000000006ACGCAAUCAGCAGCUGGUCUCACCCUUCCUCUGA2000000006ACAGUGACCAAACCUUUCACCUGAUGAGCAACCUGGCUGGGGAUGUUAUCACAGCUGCAGUGACUGCAGCUAUCAAAG2000000006ACCAGUUAGAGGGUGUGCAGCAAGCACUUUCUCAGGCUGCCCCCAUCCCAGAAGAGGACACAGACACUGAAGAAGGUGAUGACUUUGA2000000006ACUACUUGACCAGUCAGAGCUGGAUCAAAUUGAGAGUGAAUUGGGACUUACACAAGACCAGGAAGCAGAAGCACAGCAAAAUAAGAAGUCUUCAGGUUUCCUUUCAAAUCUGCUGGGAGGCCAUUAAUCUAGGAAUCAGCUUGCAACAGAGCACAAAAAACACCAAAAAAAUUUCAAACAAGAAAAAAAAAAAAAAAAGGAAAAGAAAAAAAUUGA2000000006ACUGUAUUAAAAUAUCUGGACUGAGUUUUGCCAAAUGUUAAAGGGAGAAGAGUUACUGAAGACUUUGAACACUUGCUUUUUGUGAUUGCUUAUGUCAUUAGUGCCUCAUGACUGUGUUUGAUGUCCUUUAUUGAUACAAAGUGAGCCUGUGCCUUCAUUAUCUUGCCCAUUUUAAUACAAAUGGAAACCUGGUGUUUGAAAAUCUCUGAACUGUGUGGGUUUUGGAGGAAUAUACCUGAAUUUUAUUCAAUAACAGUUUCUGGACAGGAAGAAAAAUACAGUUACAUAUUUAUAAAAUAGUCGUUAUCAGUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	804	838	916	1004	1220
Modification Positions	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	5:16475067:-	5:16475033:-	5:16474955:-	5:16474867:-	5:16474651:-
Level of Experimental Evidence	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	Ap2q43bQLNek msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6AyXsheySjfx Ap2q43bQLNek KRfQJWH4K5KH msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U Lny8GcCeVGc9 UKen6WEino9G	msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9	aJksAshEgQ8U Lny8GcCeVGc9