General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000453022
Gene ID:	ENSG00000035499
Gene Name:	DEPDC1B
Sequence (UNICHARACTER ENCODING)	AUCAGCGCUGGCGCGGCUGCGGCCGCUGCUGCCUACGCGCCAUGGAGCAUCGCAUCGUGGGGCCCGGGCCGUACCGAGCUACCAGGCUGUGGAAUGAGACCGUGGAGCUUUUUCGUGCUAAGAUGCCGUUACGGAAACAUCGCUGUCGUUUCAAGAGCUAUGAGCAUUGUUUCACAGCGGCCGAAGCUGUGGAUUGGCUGCAUGAGCUGCUGAGGUGCAGUCAAAACUUCGGCCCUGAAGUGACCCGCAAACAAACGGUCCAGCUGCUAAAAAAAUUCCUGAAGAAUCACGUUAUUGAAGACAUCAAGGGAAAAUGGGGUGAGGAAGAUUUUGAAGACAAUCGUCACUUAUACAGAUUUCCUCCUUCUUCACCCCUGAAACCAUAUCCAAAGAAGCCCCCAAACCAAAAGGAUGUUAUUAAAUUUCCAGAAUGGAAUGAUCUCCCACCAGGCACUUCACAAGAGAACAUCCCAGUGAGGCCAGUUGUGAUGAAUUCUGAGAUGUGGUACAAGCGUCACAGUAUUGCAAUUGGAGAGGUGCCAGCUUGCCGUCUUGUCCACCGCAGACAGCUGACAGAGGCCAAUGUAGAAGAGAUAUGGAAGUCUAUGACAUUAUCAUACUUACAGAAAAUUCUUGGCCUGGAUUCCUUAGAAGAAGUUUUAGACGUCAAACUUGUCAAUUCGAAGUUCAUCAPCCAUAAUGUAUAUAGUGUUAGCAAGCAGGGAGUUGUUAUUCUUGAUGACAAGUCAAAAGAACUUCCUCAUUGGGUGCUGUCAGCUAUGAAGUGUUUGGCAAAUUGGCCCAACUGUUCUGAUPUGAAGCAGCCUAUGUACUUGGGAUPUGAAAAAGAUGUCUPUAAAACCAUAGCUGAUUACUAUGGUCACUUGAAAGAGCCUCUACUUACAUUUCAUCUUUUUGAUGCUUUUGUCAGUGUACUGGGUUUGUUACAGAAGGAGAAAGUGGCAGUUGAAGCAUUUCAGAUPUGCUGCCUUCUCCUACCUCCUGAAAAUAGGAGAAAGUUACAGCUAUUGAUGAGGAUGAUGGCAAGGAUPUGCUUAAACAAAGAGAUGCCACCCCUGUGUGAUGGCUUUGGUACCCGAACACUGAUGGUUCAGACAUUUUCCCGUUGCAUCUUGUGUUCCAAGGAUGAAGUGGACUUGGAUGAGUUAUUAGCUGCUAGAUUGGUAACGUUUCUGAUGGACAAUUACCAGGAAAUUCUGAAAGUCCCUUUGGCCUUGCAGACCUCUAUAGAGGAGCGUGUGGCUCAUCUACGAAGAGUCCAGUUUCAGAAAUCCUAUCCUGAAGUCUAUCAAGAACGAUUUCCUACACCAGAAAGUGCAGCACUUCUGUUUCCUGAAAAACCCAAЖCCGAAACCACAGCUGCUAAUGUGGGCACUAAAGAAGCCUUUCCAACCAUUUCAAAGAACUAGAAGUUUUCGAAUGUAAUAAUACUUCCACAGCAACAGGUGCUAGAGACCACUGUUGUUGUUUUGAGUGAAUGGUGGUUAGGAGAAAGЖCUUUGGUGGUGGAAGAAAGAAAAGCAUAAAACAAAGACUACUGAAAUAUAGAU
Sequence (SHORT NAMES ENCODING)	AUCAGCGCUGGCGCGGCUGCGGCCGCUGCUGCCUACGCGCCAUGGAGCAUCGCAUCGUGGGGCCCGGGCCGUACCGAGCUACCAGGCUGUGGAAUGAGACCGUGGAGCUUUUUCGUGCUAAGAUGCCGUUACGGAAACAUCGCUGUCGUUUCAAGAGCUAUGAGCAUUGUUUCACAGCGGCCGAAGCUGUGGAUUGGCUGCAUGAGCUGCUGAGGUGCAGUCAAAACUUCGGCCCUGAAGUGACCCGCAAACAAACGGUCCAGCUGCUAAAAAAAUUCCUGAAGAAUCACGUUAUUGAAGACAUCAAGGGAAAAUGGGGUGAGGAAGAUUUUGAAGACAAUCGUCACUUAUACAGAUUUCCUCCUUCUUCACCCCUGAAACCAUAUCCAAAGAAGCCCCCAAACCAAAAGGAUGUUAUUAAAUUUCCAGAAUGGAAUGAUCUCCCACCAGGCACUUCACAAGAGAACAUCCCAGUGAGGCCAGUUGUGAUGAAUUCUGAGAUGUGGUACAAGCGUCACAGUAUUGCAAUUGGAGAGGUGCCAGCUUGCCGUCUUGUCCACCGCAGACAGCUGACAGAGGCCAAUGUAGAAGAGAUAUGGAAGUCUAUGACAUUAUCAUACUUACAGAAAAUUCUUGGCCUGGAUUCCUUAGAAGAAGUUUUAGACGUCAAACUUGUCAAUUCGAAGUUCAUCAYCCAUAAUGUAUAUAGUGUUAGCAAGCAGGGAGUUGUUAUUCUUGAUGACAAGUCAAAAGAACUUCCUCAUUGGGUGCUGUCAGCUAUGAAGUGUUUGGCAAAUUGGCCCAACUGUUCUGAUYUGAAGCAGCCUAUGUACUUGGGAUYUGAAAAAGAUGUCUYUAAAACCAUAGCUGAUUACUAUGGUCACUUGAAAGAGCCUCUACUUACAUUUCAUCUUUUUGAUGCUUUUGUCAGUGUACUGGGUUUGUUACAGAAGGAGAAAGUGGCAGUUGAAGCAUUUCAGAUYUGCUGCCUUCUCCUACCUCCUGAAAAUAGGAGAAAGUUACAGCUAUUGAUGAGGAUGAUGGCAAGGAUYUGCUUAAACAAAGAGAUGCCACCCCUGUGUGAUGGCUUUGGUACCCGAACACUGAUGGUUCAGACAUUUUCCCGUUGCAUCUUGUGUUCCAAGGAUGAAGUGGACUUGGAUGAGUUAUUAGCUGCUAGAUUGGUAACGUUUCUGAUGGACAAUUACCAGGAAAUUCUGAAAGUCCCUUUGGCCUUGCAGACCUCUAUAGAGGAGCGUGUGGCUCAUCUACGAAGAGUCCAGUUUCAGAAAUCCUAUCCUGAAGUCUAUCAAGAACGAUUUCCUACACCAGAAAGUGCAGCACUUCUGUUUCCUGAAAAACCCAAm6ACCGAAACCACAGCUGCUAAUGUGGGCACUAAAGAAGCCUUUCCAACCAUUUCAAAGAACUAGAAGUUUUCGAAUGUAAUAAUACUUCCACAGCAACAGGUGCUAGAGACCACUGUUGUUGUUUUGAGUGAAUGGUGGUUAGGAGAAAGm6ACUUUGGUGGUGGAAGAAAGAAAAGCAUAAAACAAAGACUACUGAAAUAUAGAU
Sequence (MODOMICS CODE ENCODING)	AUCAGCGCUGGCGCGGCUGCGGCCGCUGCUGCCUACGCGCCAUGGAGCAUCGCAUCGUGGGGCCCGGGCCGUACCGAGCUACCAGGCUGUGGAAUGAGACCGUGGAGCUUUUUCGUGCUAAGAUGCCGUUACGGAAACAUCGCUGUCGUUUCAAGAGCUAUGAGCAUUGUUUCACAGCGGCCGAAGCUGUGGAUUGGCUGCAUGAGCUGCUGAGGUGCAGUCAAAACUUCGGCCCUGAAGUGACCCGCAAACAAACGGUCCAGCUGCUAAAAAAAUUCCUGAAGAAUCACGUUAUUGAAGACAUCAAGGGAAAAUGGGGUGAGGAAGAUUUUGAAGACAAUCGUCACUUAUACAGAUUUCCUCCUUCUUCACCCCUGAAACCAUAUCCAAAGAAGCCCCCAAACCAAAAGGAUGUUAUUAAAUUUCCAGAAUGGAAUGAUCUCCCACCAGGCACUUCACAAGAGAACAUCCCAGUGAGGCCAGUUGUGAUGAAUUCUGAGAUGUGGUACAAGCGUCACAGUAUUGCAAUUGGAGAGGUGCCAGCUUGCCGUCUUGUCCACCGCAGACAGCUGACAGAGGCCAAUGUAGAAGAGAUAUGGAAGUCUAUGACAUUAUCAUACUUACAGAAAAUUCUUGGCCUGGAUUCCUUAGAAGAAGUUUUAGACGUCAAACUUGUCAAUUCGAAGUUCAUCA2000000009UCCAUAAUGUAUAUAGUGUUAGCAAGCAGGGAGUUGUUAUUCUUGAUGACAAGUCAAAAGAACUUCCUCAUUGGGUGCUGUCAGCUAUGAAGUGUUUGGCAAAUUGGCCCAACUGUUCUGAU2000000009UUGAAGCAGCCUAUGUACUUGGGAU2000000009UUGAAAAAGAUGUCU2000000009UUAAAACCAUAGCUGAUUACUAUGGUCACUUGAAAGAGCCUCUACUUACAUUUCAUCUUUUUGAUGCUUUUGUCAGUGUACUGGGUUUGUUACAGAAGGAGAAAGUGGCAGUUGAAGCAUUUCAGAU2000000009UUGCUGCCUUCUCCUACCUCCUGAAAAUAGGAGAAAGUUACAGCUAUUGAUGAGGAUGAUGGCAAGGAU2000000009UUGCUUAAACAAAGAGAUGCCACCCCUGUGUGAUGGCUUUGGUACCCGAACACUGAUGGUUCAGACAUUUUCCCGUUGCAUCUUGUGUUCCAAGGAUGAAGUGGACUUGGAUGAGUUAUUAGCUGCUAGAUUGGUAACGUUUCUGAUGGACAAUUACCAGGAAAUUCUGAAAGUCCCUUUGGCCUUGCAGACCUCUAUAGAGGAGCGUGUGGCUCAUCUACGAAGAGUCCAGUUUCAGAAAUCCUAUCCUGAAGUCUAUCAAGAACGAUUUCCUACACCAGAAAGUGCAGCACUUCUGUUUCCUGAAAAACCCAA2000000006ACCGAAACCACAGCUGCUAAUGUGGGCACUAAAGAAGCCUUUCCAACCAUUUCAAAGAACUAGAAGUUUUCGAAUGUAAUAAUACUUCCACAGCAACAGGUGCUAGAGACCACUGUUGUUGUUUUGAGUGAAUGGUGGUUAGGAGAAAG2000000006ACUUUGGUGGUGGAAGAAAGAAAAGCAUAAAACAAAGACUACUGAAAUAUAGAU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	694	816	841	856	983	1052	1367	1516
Modification Positions	Y	Y	Y	Y	Y	Y	m6A	m6A
Genomic Coordinates	5:60644801:-	5:60638873:-	5:60638848:-	5:60638833:-	5:60605813:-	5:60605744:-	5:60597831:-	5:60597682:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL nfCHyrYzE6fB BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8