General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000399438
Gene ID:	ENSG00000113597
Gene Name:	TRAPPC13
Sequence (UNICHARACTER ENCODING)	CCCCGUAGGCUGUGGGUCAAAAGUGCCGGUCAAAAUGGAAGUGAAUCCCCCUAAACAGGAGCACCUGCUGGCGCUAAAAGUGAUGCGGCUGACUAAGCCUACUPUAUUCACCAAUAUCCCAGUAACAUGUGAAGAGAAAGACUUACCUGGAGAUCUCUPUAACCAGCUGAUGAGAGAUGAUCCUUCAACCGUUAAUGGUGCAGAAGUUUUAAUGUUGGGAGAAAUGCUGACUPUACCACAGAAUUUUGGGAAUAUAUUUUUGGGAGAGACCUUUUCCAGUUAUAUCAGCGUUCAUAAUGAUAGCAAUCAAGUUGUAAAAGACAUAUUAGUAAAAGCUGAUCUUCAGACAAGUUCUCAGCGUUUAAAUCUUUCAGCCUCCAAUGCUGCAGUGGCUGAACUUAAACCGGAUUGUUGUAUUGAUGAUGUCAUACAUCAUGAAGUCAAAGAAAUUGGAACACACAUCUUGGUAUGUGCUGUGAGUUAUACAACUCAGGCUGGAGAAAAAAUGUAUUUCAGAAAAUUCUUCAAAUUUCAGGUUCUCAAACCAUUGGAUGUGAAAACCAAAUUUUACAAUGCAGAGAGUGACCUCAGUUCUGUGACUGAUGAAGUAUUUCUGGAAGCCCAGAUUCAGAAUAUGACAACCUCACCUAUGUUUAUGGAGAAGGUUUCACUGGAGCCAUCUAUUAUGUACAAUGUAACAGAAUUAAAUUCAGUCAGCCAAGCUGGAGAAUGUGUGUCUACGUUUGGGUCAAGAGCAUAUUUGCAACCAAUGGAUACACGCCAGUACUUAUACUGCCUAAAGCCAAAGAAUGAAUUUGCAGAAAAAGCAGGCAUCAUUAAGGGAGUAЖCAGUAAUUGGAAAAUUGGAUAUAGUAUGGAAAACAAAUCUAGGUGAAAGGGGAAGGUUACAGACCAGCCAACUUCAAAGAAUGGCUCCAGGUUAUGGAGAUGUUAGGUUGUCUUUGGAGGCAAUACCAGAUACCGUAAACCUUGAAGAACCUUUUCAUAUUACCUGUAAAAUAACAAACUGCAGUGAAAGGACUAUGGAUCUGGUUUUGGAAAUGUGCAAUACCAAUUCCAPCCACUGGUGUGGAAUUUCAGGAAGACAGCUGGGAAAGCUGCAUCCAAGUUCUUCGCUCUGUCUUGCCCUUACUCUGCUUUCUUCAGUACAGGGACUGCAAAGCAUCUCUGGCUUAAGACUAЖCAGACACAUUCUUAAAGAGAACAUAUGAAUAUGAUGACAUCGCACAAGUCUGUGUGGUAUCUUCUGCCAUUAAAGUGGAAAGCUGAAGGAAACUUCCAAUGUUAGGCUUUUCAUUUAGUUUCACAGAACUGCUCUUUUUGUUACCUUUGUAAAAUGAUGACGUCAACAACGAAGUAAAUAUGUUACUUAAAUUUUCUUUCCUGUAAAAUGGUUAAAAUAUUAAAUAUUUGUUUUGAAGAGAUCUGAUUUUAUCUUGUAAUUUAUAUUUGAAAUGAACAUGUGUAUAUUUUCUACACCUAUUAUUUAAUUUCAUUUCAUUUUAGAUGACCAUUGGACUUUGUUCUCCAAAAGCUGUGUAUCUGAGACCAUUUGUCCCUAGCAAGUUAUCUAGAACACGAGUCAGCACACUUUUUAUGUAAGGUACAAGAUACUAAAUAUUUUAGGCUUUGCAGGCCGUAAGGUUUCUGUCACAAAUACUGAACUCUGCCAUCGUACUUCAAGAGCAGCCAGUAGGCAAAAAAAGUACAGUGGUGUACACAAAAAGAAGCAGUUGGACUCGGGAAGCUGAGGCAGGAGAAUCACUUGAACCGGGGAGGCAGAGGUUGCAGUUAAGCCGAGAUCAUGCUACUGCACUCUAGCCUGAGCGACAGAGUGAGACUCUGUCUCAAAAAAAAAGAGGCAGCUGGGCAGAUUUGGCCUGCAGGGUAUAGUUGGCUGACCUCAAUCUAGAAGAUAGAGUUGUUUCUUAGAACUUUGUAAUAUUUUGGUUAGAAAUAUUUCAGUUAACUCCAGUUUUUUCCUAGCUAUUCGGUCAGCAGAAAAAGUUUGCUUAAAACAAAGGGGGUAGUCCUCUUAUAACCUGAUAUUUGUCAACACAGUAUAAGCUUUCUAGUUGUUUUCAAAAUUACUGUAAUGGUUUGUGUCUGUAUUUGUAUAUUAUACCUACAAACAUACAUAUCUUUCAGCUACUGAACACAUCAGAAUUGGUUUUACUUUUUAGGUUGUUGAUUUUUUUUAAUUAACUAUUAACUAAGAAUAAUACUUAUUUUCUAAUUAUAAGCCAAAAACCCCUGGGUUUUUUUCUCAUUGAUUAAGCCACUUAUUUUUAUAAGGUAUAUUUAAAUAAUUCCCAUCUUCUGAUAUGAUUUUAAACUCUAAAUCAUGUGUUACUGUUACAAAACUUUCUCUCUCCAUGUAAUCACACUUAGUUAUGAGCAAAGCAGUGAGAAAGUUGAGGUGAUAAЖCAACUUUGCAGCAUUAAUGUAACAAAAAGUUUCAGUAUUUGUCAGGAAAACAAAAGCUUAGGCUGUUAAAUAAAAGCUAUUCUAUUUUGGUAAGUUGAAAUUCAAGAAUGUAUAUAUAAUUUCUUAAAUGUAAGAGUGCAUUAAAUCAAAUACAAAAAUUGGUUUUUCAAUGCAUCAUUAUUUAUUGCCAUAACAAAUUGUUUGGUCCAAAAUGAAAGCUAUAUUCAGAAGGUUUGCACCUCAAAAUUGAGUAAUAAUUAAUGAAAUGUCUGUACAAAAUAAAGUGCAAGCAGUGUAAAAUUGAAGUCUGUCUUUGUUUCAAAAUGAUUAAGAUUAAAUGAUGAAAUAAUAUUUUAUAGCCACUGCAUUGGAUACUUGGAUUGUUUUUCAAGCAUCUUCUUAUGACUAAAUCUUCUGUUUCAUUCUGUUUUAAAUCUAAAAAGUAAAAUGAUGGUCACUUGGAA
Sequence (SHORT NAMES ENCODING)	CCCCGUAGGCUGUGGGUCAAAAGUGCCGGUCAAAAUGGAAGUGAAUCCCCCUAAACAGGAGCACCUGCUGGCGCUAAAAGUGAUGCGGCUGACUAAGCCUACUYUAUUCACCAAUAUCCCAGUAACAUGUGAAGAGAAAGACUUACCUGGAGAUCUCUYUAACCAGCUGAUGAGAGAUGAUCCUUCAACCGUUAAUGGUGCAGAAGUUUUAAUGUUGGGAGAAAUGCUGACUYUACCACAGAAUUUUGGGAAUAUAUUUUUGGGAGAGACCUUUUCCAGUUAUAUCAGCGUUCAUAAUGAUAGCAAUCAAGUUGUAAAAGACAUAUUAGUAAAAGCUGAUCUUCAGACAAGUUCUCAGCGUUUAAAUCUUUCAGCCUCCAAUGCUGCAGUGGCUGAACUUAAACCGGAUUGUUGUAUUGAUGAUGUCAUACAUCAUGAAGUCAAAGAAAUUGGAACACACAUCUUGGUAUGUGCUGUGAGUUAUACAACUCAGGCUGGAGAAAAAAUGUAUUUCAGAAAAUUCUUCAAAUUUCAGGUUCUCAAACCAUUGGAUGUGAAAACCAAAUUUUACAAUGCAGAGAGUGACCUCAGUUCUGUGACUGAUGAAGUAUUUCUGGAAGCCCAGAUUCAGAAUAUGACAACCUCACCUAUGUUUAUGGAGAAGGUUUCACUGGAGCCAUCUAUUAUGUACAAUGUAACAGAAUUAAAUUCAGUCAGCCAAGCUGGAGAAUGUGUGUCUACGUUUGGGUCAAGAGCAUAUUUGCAACCAAUGGAUACACGCCAGUACUUAUACUGCCUAAAGCCAAAGAAUGAAUUUGCAGAAAAAGCAGGCAUCAUUAAGGGAGUAm6ACAGUAAUUGGAAAAUUGGAUAUAGUAUGGAAAACAAAUCUAGGUGAAAGGGGAAGGUUACAGACCAGCCAACUUCAAAGAAUGGCUCCAGGUUAUGGAGAUGUUAGGUUGUCUUUGGAGGCAAUACCAGAUACCGUAAACCUUGAAGAACCUUUUCAUAUUACCUGUAAAAUAACAAACUGCAGUGAAAGGACUAUGGAUCUGGUUUUGGAAAUGUGCAAUACCAAUUCCAYCCACUGGUGUGGAAUUUCAGGAAGACAGCUGGGAAAGCUGCAUCCAAGUUCUUCGCUCUGUCUUGCCCUUACUCUGCUUUCUUCAGUACAGGGACUGCAAAGCAUCUCUGGCUUAAGACUAm6ACAGACACAUUCUUAAAGAGAACAUAUGAAUAUGAUGACAUCGCACAAGUCUGUGUGGUAUCUUCUGCCAUUAAAGUGGAAAGCUGAAGGAAACUUCCAAUGUUAGGCUUUUCAUUUAGUUUCACAGAACUGCUCUUUUUGUUACCUUUGUAAAAUGAUGACGUCAACAACGAAGUAAAUAUGUUACUUAAAUUUUCUUUCCUGUAAAAUGGUUAAAAUAUUAAAUAUUUGUUUUGAAGAGAUCUGAUUUUAUCUUGUAAUUUAUAUUUGAAAUGAACAUGUGUAUAUUUUCUACACCUAUUAUUUAAUUUCAUUUCAUUUUAGAUGACCAUUGGACUUUGUUCUCCAAAAGCUGUGUAUCUGAGACCAUUUGUCCCUAGCAAGUUAUCUAGAACACGAGUCAGCACACUUUUUAUGUAAGGUACAAGAUACUAAAUAUUUUAGGCUUUGCAGGCCGUAAGGUUUCUGUCACAAAUACUGAACUCUGCCAUCGUACUUCAAGAGCAGCCAGUAGGCAAAAAAAGUACAGUGGUGUACACAAAAAGAAGCAGUUGGACUCGGGAAGCUGAGGCAGGAGAAUCACUUGAACCGGGGAGGCAGAGGUUGCAGUUAAGCCGAGAUCAUGCUACUGCACUCUAGCCUGAGCGACAGAGUGAGACUCUGUCUCAAAAAAAAAGAGGCAGCUGGGCAGAUUUGGCCUGCAGGGUAUAGUUGGCUGACCUCAAUCUAGAAGAUAGAGUUGUUUCUUAGAACUUUGUAAUAUUUUGGUUAGAAAUAUUUCAGUUAACUCCAGUUUUUUCCUAGCUAUUCGGUCAGCAGAAAAAGUUUGCUUAAAACAAAGGGGGUAGUCCUCUUAUAACCUGAUAUUUGUCAACACAGUAUAAGCUUUCUAGUUGUUUUCAAAAUUACUGUAAUGGUUUGUGUCUGUAUUUGUAUAUUAUACCUACAAACAUACAUAUCUUUCAGCUACUGAACACAUCAGAAUUGGUUUUACUUUUUAGGUUGUUGAUUUUUUUUAAUUAACUAUUAACUAAGAAUAAUACUUAUUUUCUAAUUAUAAGCCAAAAACCCCUGGGUUUUUUUCUCAUUGAUUAAGCCACUUAUUUUUAUAAGGUAUAUUUAAAUAAUUCCCAUCUUCUGAUAUGAUUUUAAACUCUAAAUCAUGUGUUACUGUUACAAAACUUUCUCUCUCCAUGUAAUCACACUUAGUUAUGAGCAAAGCAGUGAGAAAGUUGAGGUGAUAAm6ACAACUUUGCAGCAUUAAUGUAACAAAAAGUUUCAGUAUUUGUCAGGAAAACAAAAGCUUAGGCUGUUAAAUAAAAGCUAUUCUAUUUUGGUAAGUUGAAAUUCAAGAAUGUAUAUAUAAUUUCUUAAAUGUAAGAGUGCAUUAAAUCAAAUACAAAAAUUGGUUUUUCAAUGCAUCAUUAUUUAUUGCCAUAACAAAUUGUUUGGUCCAAAAUGAAAGCUAUAUUCAGAAGGUUUGCACCUCAAAAUUGAGUAAUAAUUAAUGAAAUGUCUGUACAAAAUAAAGUGCAAGCAGUGUAAAAUUGAAGUCUGUCUUUGUUUCAAAAUGAUUAAGAUUAAAUGAUGAAAUAAUAUUUUAUAGCCACUGCAUUGGAUACUUGGAUUGUUUUUCAAGCAUCUUCUUAUGACUAAAUCUUCUGUUUCAUUCUGUUUUAAAUCUAAAAAGUAAAAUGAUGGUCACUUGGAA
Sequence (MODOMICS CODE ENCODING)	CCCCGUAGGCUGUGGGUCAAAAGUGCCGGUCAAAAUGGAAGUGAAUCCCCCUAAACAGGAGCACCUGCUGGCGCUAAAAGUGAUGCGGCUGACUAAGCCUACU2000000009UUAUUCACCAAUAUCCCAGUAACAUGUGAAGAGAAAGACUUACCUGGAGAUCUCU2000000009UUAACCAGCUGAUGAGAGAUGAUCCUUCAACCGUUAAUGGUGCAGAAGUUUUAAUGUUGGGAGAAAUGCUGACU2000000009UUACCACAGAAUUUUGGGAAUAUAUUUUUGGGAGAGACCUUUUCCAGUUAUAUCAGCGUUCAUAAUGAUAGCAAUCAAGUUGUAAAAGACAUAUUAGUAAAAGCUGAUCUUCAGACAAGUUCUCAGCGUUUAAAUCUUUCAGCCUCCAAUGCUGCAGUGGCUGAACUUAAACCGGAUUGUUGUAUUGAUGAUGUCAUACAUCAUGAAGUCAAAGAAAUUGGAACACACAUCUUGGUAUGUGCUGUGAGUUAUACAACUCAGGCUGGAGAAAAAAUGUAUUUCAGAAAAUUCUUCAAAUUUCAGGUUCUCAAACCAUUGGAUGUGAAAACCAAAUUUUACAAUGCAGAGAGUGACCUCAGUUCUGUGACUGAUGAAGUAUUUCUGGAAGCCCAGAUUCAGAAUAUGACAACCUCACCUAUGUUUAUGGAGAAGGUUUCACUGGAGCCAUCUAUUAUGUACAAUGUAACAGAAUUAAAUUCAGUCAGCCAAGCUGGAGAAUGUGUGUCUACGUUUGGGUCAAGAGCAUAUUUGCAACCAAUGGAUACACGCCAGUACUUAUACUGCCUAAAGCCAAAGAAUGAAUUUGCAGAAAAAGCAGGCAUCAUUAAGGGAGUA2000000006ACAGUAAUUGGAAAAUUGGAUAUAGUAUGGAAAACAAAUCUAGGUGAAAGGGGAAGGUUACAGACCAGCCAACUUCAAAGAAUGGCUCCAGGUUAUGGAGAUGUUAGGUUGUCUUUGGAGGCAAUACCAGAUACCGUAAACCUUGAAGAACCUUUUCAUAUUACCUGUAAAAUAACAAACUGCAGUGAAAGGACUAUGGAUCUGGUUUUGGAAAUGUGCAAUACCAAUUCCA2000000009UCCACUGGUGUGGAAUUUCAGGAAGACAGCUGGGAAAGCUGCAUCCAAGUUCUUCGCUCUGUCUUGCCCUUACUCUGCUUUCUUCAGUACAGGGACUGCAAAGCAUCUCUGGCUUAAGACUA2000000006ACAGACACAUUCUUAAAGAGAACAUAUGAAUAUGAUGACAUCGCACAAGUCUGUGUGGUAUCUUCUGCCAUUAAAGUGGAAAGCUGAAGGAAACUUCCAAUGUUAGGCUUUUCAUUUAGUUUCACAGAACUGCUCUUUUUGUUACCUUUGUAAAAUGAUGACGUCAACAACGAAGUAAAUAUGUUACUUAAAUUUUCUUUCCUGUAAAAUGGUUAAAAUAUUAAAUAUUUGUUUUGAAGAGAUCUGAUUUUAUCUUGUAAUUUAUAUUUGAAAUGAACAUGUGUAUAUUUUCUACACCUAUUAUUUAAUUUCAUUUCAUUUUAGAUGACCAUUGGACUUUGUUCUCCAAAAGCUGUGUAUCUGAGACCAUUUGUCCCUAGCAAGUUAUCUAGAACACGAGUCAGCACACUUUUUAUGUAAGGUACAAGAUACUAAAUAUUUUAGGCUUUGCAGGCCGUAAGGUUUCUGUCACAAAUACUGAACUCUGCCAUCGUACUUCAAGAGCAGCCAGUAGGCAAAAAAAGUACAGUGGUGUACACAAAAAGAAGCAGUUGGACUCGGGAAGCUGAGGCAGGAGAAUCACUUGAACCGGGGAGGCAGAGGUUGCAGUUAAGCCGAGAUCAUGCUACUGCACUCUAGCCUGAGCGACAGAGUGAGACUCUGUCUCAAAAAAAAAGAGGCAGCUGGGCAGAUUUGGCCUGCAGGGUAUAGUUGGCUGACCUCAAUCUAGAAGAUAGAGUUGUUUCUUAGAACUUUGUAAUAUUUUGGUUAGAAAUAUUUCAGUUAACUCCAGUUUUUUCCUAGCUAUUCGGUCAGCAGAAAAAGUUUGCUUAAAACAAAGGGGGUAGUCCUCUUAUAACCUGAUAUUUGUCAACACAGUAUAAGCUUUCUAGUUGUUUUCAAAAUUACUGUAAUGGUUUGUGUCUGUAUUUGUAUAUUAUACCUACAAACAUACAUAUCUUUCAGCUACUGAACACAUCAGAAUUGGUUUUACUUUUUAGGUUGUUGAUUUUUUUUAAUUAACUAUUAACUAAGAAUAAUACUUAUUUUCUAAUUAUAAGCCAAAAACCCCUGGGUUUUUUUCUCAUUGAUUAAGCCACUUAUUUUUAUAAGGUAUAUUUAAAUAAUUCCCAUCUUCUGAUAUGAUUUUAAACUCUAAAUCAUGUGUUACUGUUACAAAACUUUCUCUCUCCAUGUAAUCACACUUAGUUAUGAGCAAAGCAGUGAGAAAGUUGAGGUGAUAA2000000006ACAACUUUGCAGCAUUAAUGUAACAAAAAGUUUCAGUAUUUGUCAGGAAAACAAAAGCUUAGGCUGUUAAAUAAAAGCUAUUCUAUUUUGGUAAGUUGAAAUUCAAGAAUGUAUAUAUAAUUUCUUAAAUGUAAGAGUGCAUUAAAUCAAAUACAAAAAUUGGUUUUUCAAUGCAUCAUUAUUUAUUGCCAUAACAAAUUGUUUGGUCCAAAAUGAAAGCUAUAUUCAGAAGGUUUGCACCUCAAAAUUGAGUAAUAAUUAAUGAAAUGUCUGUACAAAAUAAAGUGCAAGCAGUGUAAAAUUGAAGUCUGUCUUUGUUUCAAAAUGAUUAAGAUUAAAUGAUGAAAUAAUAUUUUAUAGCCACUGCAUUGGAUACUUGGAUUGUUUUUCAAGCAUCUUCUUAUGACUAAAUCUUCUGUUUCAUUCUGUUUUAAAUCUAAAAAGUAAAAUGAUGGUCACUUGGAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	104	159	233	848	1080	1202	2446
Modification Positions	Y	Y	Y	m6A	Y	m6A	m6A
Genomic Coordinates	5:65635324:+	5:65635953:+	5:65636027:+	5:65660814:+	5:65664284:+	5:65664525:+	5:65665769:+
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	dknfVe6BK8aP Yfn77uLS5tv8	dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda a7o5Kmjr4Tdp