General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000493815
Gene ID:	ENSG00000196923
Gene Name:	PDLIM7
Sequence (UNICHARACTER ENCODING)	CGACGCAGAGCAGCGCCCUGGCCGGGCCAAGCAGGAGCCGGCAUCAUGGAUUCCUUCAAAGUAGUGCUGGAGGGGCCAGCACCUUGGGGCUUCCGGCUGCAAGGGGGCAAGGACUUCAAUGUGCCCCUCUCCAUUUCCCGGCUCACUCCUGGGGGCAAAGCGGCGCAGGCCGGAGUGGCCGUGGGUGACUGGGUGCUGAGCAUCGAUGGCGAGAAUGCGGGUAGCCUCACACACAUCGAAGCUCAGAACAAGAUCCGGGCCUGCGGGGAGCGCCUCAGCCUGGGCCUCAGCAGGGCCCAGCCGGUUCAGAGCAAACCGCAGAAGGCCPCCGCCCCCGCCGCGGACCCUCCGCGGUACACCUUUGCACCCAGCGUCUCCCUCAACAAGACGGCCCGGCCCUUUGGGGCGCCCCCGCCCGCUGACAGCGCCCCGCAGCAGAAUGGGUGCAGACCCCUGACAAACAGCCGCUCCGACCGCUGGUCCCAGAUGCCAGCAAGCAGCGGCUGAUGGAGAACACAGAGGACUGGCGGCCGCGGCCGGGGACAGGCCAGUCGCGUUCCUUCCGCAPCCUUGCCCACCUCACAGGCACCGAGUUCAUGCAAGACCCGGAUGAGGAGCACCUGAAGAAAUCAAGCCAGGUGCCCAGGACAGAAGCCCCAGCCCCAGCCUCAUCUACACCCCAGGAGCCCUGGCCUGGCCCUACCGCCCCCAGCCCUACCAGCCGCCCGCCCUGGGCUGUGGACCCUGCGUUUGCCGAGCGCUAUGCCCCGGACAAAACGAGCACAGUGCUGACCCGGCACAGCCAGCCGGCCACGCCCACGCCGCUGCAGAGCCGCACCPCCAUUGUGCAGGCAGCUGCCGGAGGGGUGCCAGGAGGGGGCAGCAACAACGGCAAGACUCCCGUGUGUCACCAGUGCCACAAGGUCAPCCGGGGCCGCUACCUGGUGGCGCUGGGCCACGCGUACCACCCGGAGGAGUUUGUGUGUAGCCAGUGUGGGAAGGUCCUGGAAGAGGGUGGCUUCUUUGAGGAGAAGGGCGCCAUCUUCUGCCCACCAUGCUAUGACGUGCGCUAUGCACCCAGCUGUGCCAAGUGCAAGAAGAAGAUUACЖGGCGAGAUCAUGCACGCCCUGAAGAUGACCUGGCACGUGCACUGCUPUACCUGUGCUGCCUGCAAGACGCCCAPCCGGAACAGGGCCUUCUACAUGGAGGAGGGCGUGCCCUAUUGCGAGCGAGACUAUGAGAAGAUGUUUGGCACGAAAUGCCAUGGCUGUGACUUCAAGAUCGACGCUGGGGACCGCUUCCUGGAGGCCCUGGGCUUCAGCUGGCAUGACACCUGCUUCGUCUGUGCGAUAUGUCAGAUCAACCUGGAAGGAAAGACCUUCUACUCCAAGAAGGACAGGCCUCUCUGCAAGAGCCAUGCCUUCUCUCAUGUGUGAGCCCCUUCUGCCCACAGCUGCCGCGGUGGCCCCUAGCCUGAGGGGCCUGGAGUCGUGGCCCUGCAUUUCUGGGUAGGGCUGGCAAUGGUUGCCUUAACCCUGGCUCCUGGCCCGAGCCUGGGGCUCCCUGGGCCCUGCCCCACCCACCUUAUCCUCCCACCCCACUCCCPCCACCACCACAGCACACCGGUGCUGGCCACACCAGCCCCCUUUCACCPCCAGUGCCACAAUAAACCUGUACCCAGCUGUG
Sequence (SHORT NAMES ENCODING)	CGACGCAGAGCAGCGCCCUGGCCGGGCCAAGCAGGAGCCGGCAUCAUGGAUUCCUUCAAAGUAGUGCUGGAGGGGCCAGCACCUUGGGGCUUCCGGCUGCAAGGGGGCAAGGACUUCAAUGUGCCCCUCUCCAUUUCCCGGCUCACUCCUGGGGGCAAAGCGGCGCAGGCCGGAGUGGCCGUGGGUGACUGGGUGCUGAGCAUCGAUGGCGAGAAUGCGGGUAGCCUCACACACAUCGAAGCUCAGAACAAGAUCCGGGCCUGCGGGGAGCGCCUCAGCCUGGGCCUCAGCAGGGCCCAGCCGGUUCAGAGCAAACCGCAGAAGGCCYCCGCCCCCGCCGCGGACCCUCCGCGGUACACCUUUGCACCCAGCGUCUCCCUCAACAAGACGGCCCGGCCCUUUGGGGCGCCCCCGCCCGCUGACAGCGCCCCGCAGCAGAAUGGGUGCAGACCCCUGACAAACAGCCGCUCCGACCGCUGGUCCCAGAUGCCAGCAAGCAGCGGCUGAUGGAGAACACAGAGGACUGGCGGCCGCGGCCGGGGACAGGCCAGUCGCGUUCCUUCCGCAYCCUUGCCCACCUCACAGGCACCGAGUUCAUGCAAGACCCGGAUGAGGAGCACCUGAAGAAAUCAAGCCAGGUGCCCAGGACAGAAGCCCCAGCCCCAGCCUCAUCUACACCCCAGGAGCCCUGGCCUGGCCCUACCGCCCCCAGCCCUACCAGCCGCCCGCCCUGGGCUGUGGACCCUGCGUUUGCCGAGCGCUAUGCCCCGGACAAAACGAGCACAGUGCUGACCCGGCACAGCCAGCCGGCCACGCCCACGCCGCUGCAGAGCCGCACCYCCAUUGUGCAGGCAGCUGCCGGAGGGGUGCCAGGAGGGGGCAGCAACAACGGCAAGACUCCCGUGUGUCACCAGUGCCACAAGGUCAYCCGGGGCCGCUACCUGGUGGCGCUGGGCCACGCGUACCACCCGGAGGAGUUUGUGUGUAGCCAGUGUGGGAAGGUCCUGGAAGAGGGUGGCUUCUUUGAGGAGAAGGGCGCCAUCUUCUGCCCACCAUGCUAUGACGUGCGCUAUGCACCCAGCUGUGCCAAGUGCAAGAAGAAGAUUACm6AGGCGAGAUCAUGCACGCCCUGAAGAUGACCUGGCACGUGCACUGCUYUACCUGUGCUGCCUGCAAGACGCCCAYCCGGAACAGGGCCUUCUACAUGGAGGAGGGCGUGCCCUAUUGCGAGCGAGACUAUGAGAAGAUGUUUGGCACGAAAUGCCAUGGCUGUGACUUCAAGAUCGACGCUGGGGACCGCUUCCUGGAGGCCCUGGGCUUCAGCUGGCAUGACACCUGCUUCGUCUGUGCGAUAUGUCAGAUCAACCUGGAAGGAAAGACCUUCUACUCCAAGAAGGACAGGCCUCUCUGCAAGAGCCAUGCCUUCUCUCAUGUGUGAGCCCCUUCUGCCCACAGCUGCCGCGGUGGCCCCUAGCCUGAGGGGCCUGGAGUCGUGGCCCUGCAUUUCUGGGUAGGGCUGGCAAUGGUUGCCUUAACCCUGGCUCCUGGCCCGAGCCUGGGGCUCCCUGGGCCCUGCCCCACCCACCUUAUCCUCCCACCCCACUCCCYCCACCACCACAGCACACCGGUGCUGGCCACACCAGCCCCCUUUCACCYCCAGUGCCACAAUAAACCUGUACCCAGCUGUG
Sequence (MODOMICS CODE ENCODING)	CGACGCAGAGCAGCGCCCUGGCCGGGCCAAGCAGGAGCCGGCAUCAUGGAUUCCUUCAAAGUAGUGCUGGAGGGGCCAGCACCUUGGGGCUUCCGGCUGCAAGGGGGCAAGGACUUCAAUGUGCCCCUCUCCAUUUCCCGGCUCACUCCUGGGGGCAAAGCGGCGCAGGCCGGAGUGGCCGUGGGUGACUGGGUGCUGAGCAUCGAUGGCGAGAAUGCGGGUAGCCUCACACACAUCGAAGCUCAGAACAAGAUCCGGGCCUGCGGGGAGCGCCUCAGCCUGGGCCUCAGCAGGGCCCAGCCGGUUCAGAGCAAACCGCAGAAGGCC2000000009UCCGCCCCCGCCGCGGACCCUCCGCGGUACACCUUUGCACCCAGCGUCUCCCUCAACAAGACGGCCCGGCCCUUUGGGGCGCCCCCGCCCGCUGACAGCGCCCCGCAGCAGAAUGGGUGCAGACCCCUGACAAACAGCCGCUCCGACCGCUGGUCCCAGAUGCCAGCAAGCAGCGGCUGAUGGAGAACACAGAGGACUGGCGGCCGCGGCCGGGGACAGGCCAGUCGCGUUCCUUCCGCA2000000009UCCUUGCCCACCUCACAGGCACCGAGUUCAUGCAAGACCCGGAUGAGGAGCACCUGAAGAAAUCAAGCCAGGUGCCCAGGACAGAAGCCCCAGCCCCAGCCUCAUCUACACCCCAGGAGCCCUGGCCUGGCCCUACCGCCCCCAGCCCUACCAGCCGCCCGCCCUGGGCUGUGGACCCUGCGUUUGCCGAGCGCUAUGCCCCGGACAAAACGAGCACAGUGCUGACCCGGCACAGCCAGCCGGCCACGCCCACGCCGCUGCAGAGCCGCACC2000000009UCCAUUGUGCAGGCAGCUGCCGGAGGGGUGCCAGGAGGGGGCAGCAACAACGGCAAGACUCCCGUGUGUCACCAGUGCCACAAGGUCA2000000009UCCGGGGCCGCUACCUGGUGGCGCUGGGCCACGCGUACCACCCGGAGGAGUUUGUGUGUAGCCAGUGUGGGAAGGUCCUGGAAGAGGGUGGCUUCUUUGAGGAGAAGGGCGCCAUCUUCUGCCCACCAUGCUAUGACGUGCGCUAUGCACCCAGCUGUGCCAAGUGCAAGAAGAAGAUUAC2000000006AGGCGAGAUCAUGCACGCCCUGAAGAUGACCUGGCACGUGCACUGCU2000000009UUACCUGUGCUGCCUGCAAGACGCCCA2000000009UCCGGAACAGGGCCUUCUACAUGGAGGAGGGCGUGCCCUAUUGCGAGCGAGACUAUGAGAAGAUGUUUGGCACGAAAUGCCAUGGCUGUGACUUCAAGAUCGACGCUGGGGACCGCUUCCUGGAGGCCCUGGGCUUCAGCUGGCAUGACACCUGCUUCGUCUGUGCGAUAUGUCAGAUCAACCUGGAAGGAAAGACCUUCUACUCCAAGAAGGACAGGCCUCUCUGCAAGAGCCAUGCCUUCUCUCAUGUGUGAGCCCCUUCUGCCCACAGCUGCCGCGGUGGCCCCUAGCCUGAGGGGCCUGGAGUCGUGGCCCUGCAUUUCUGGGUAGGGCUGGCAAUGGUUGCCUUAACCCUGGCUCCUGGCCCGAGCCUGGGGCUCCCUGGGCCCUGCCCCACCCACCUUAUCCUCCCACCCCACUCCC2000000009UCCACCACCACAGCACACCGGUGCUGGCCACACCAGCCCCCUUUCACC2000000009UCCAGUGCCACAAUAAACCUGUACCCAGCUGUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	328	568	840	928	1109	1156	1183	1606	1654
Modification Positions	Y	Y	Y	Y	m6A	Y	Y	Y	Y
Genomic Coordinates	5:177491922:-	5:177491039:-	5:177489484:-	5:177489396:-	5:177488071:-	5:177484147:-	5:177484120:-	5:177483474:-	5:177483426:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY dA7YoLwHrzgR	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8