General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000489262
Gene ID:	ENSG00000175309
Gene Name:	PHYKPL
Sequence (UNICHARACTER ENCODING)	CGCUCGAGUUCCUGCGCGGGACUGCCAAGGCACGACCACGGGCCGGAAGGCUGCCAGGCCCAGUGGGCAAGCGAAGAAAUGAACCACCGCAACGCGGGCGCUUCGGGGCGGGGCCGAGUGCGAACCUGAGCCCCAAAUCCCGACCCAGGCAGGGGCGGGGCCCGGAGCGGGGCCUUGGAGGCCCAGCCCGCGCGGCGACGUCUCCGCGUGGCGUCACGGCACCGACUGACGGCCACCCACCAUGGCCGCAGACCAGCGCCCGAAGGCCGACACGCUGGCCCUGAGGCAACGGCUCAUCAGGUACCCGGGCGGGGGGCGGGCGGCGGGGGGCGCGGGGCUGCGCGGAGAGGCACGCGCACGCACGACGCACGCACGCACGCACUACGCACGCGCCUCCGGCUAGGAAGCCGCUGCUACCCAUCCCGUCCGGCCGCUGCCCCGGCCCCGCUGGAGCUUCUAGGGCCCGAGGCGGGCGGCGCCGUUGGGCAGUCCCGGCGGGUGGUCUCCGGGGCCGCCUCCCCGACAGCGCCGUCUCCAGGCCGCCCAGUUCAGGAGACGGCCCCGCCCUCACCGCUGUUCGGCUGUGUCAGCCUCGCUUGGCAGCCUUUACUCCGGAGAAGACCUUCACCCUGGCGCCUGAGAGGACCUCACCCAGGGUGGCCCGUCAGCAGCACCUGGGCCUGGCUCGAGAGUGACCUGGGAGGGGGCUGAAAGGGCAGACAAGGGAGAGUCGGGGGAGUCGGUUCACAGGCAGCACACUUGACCUGUGAGGGGGCCCUCGGUGGGЖCGGUGGGUGAGGUCGCCUCCCACUGGAGCUUAGGGCUGGCACCCAGCGAGGGGCAGCAGGGCCACGUGGCUGGCAAGGAGCUGUUUAGGGCUGAGAGCCAGGCACCUAAUGUUGGUGCCCUGGCCCAUCCCAUCGAAGACACGCGGCCUUAUGGAGUCCCCAUGGGACGGGGCAGCCACCUUUUCUCAGGAUCCGGGAGACUGACGCGGЖCACAUGCAGAAAUGAGCAAGGAGGCCACAGAGGCUGAAAAUGCUUUCAGAAACAAUCCGAAGUUUCAGCGACUUGUUACCCCAUCUGCUUCCUGCUUUGCAACCACCUGUGGAGUGGAGAGACAAGCUCUUCCUGCAGЖCUCUUUUUUCCCGAGGAUCCUGUUAAGAUUGUCCGGGCCCAAGGGCAGUACAUGUACGAUGAACAGGGGGCAGAAUACAUCGAUUGCAUCAGCAAUGUGGCGCACGUUGGGCACUGCCACCCUCUCGUGGUCCAAGCAGCACAUGAGCAGAACCAGGUGCUCAACACCAACAGCCGGUACCUGCAUGACAACAUCGUGGACUAUGCGCAGAGGCUGUCAGAGACCCUGCCGGAGCAGCUCUGUGUGUUCUAUUUCCUGAAUUCUGGGUCAGAAGCCAAUGACCUGGCCCUGAGGCUGGCUCGCCACUACACGGGACACCAGGACGUGGUGGUAUUAGAUCAUGCGUAUCACGGCCACCUGAGCUCCCUGAUUGACAUCAGUCCCUACAAGUUCCGCAACCUGGAUGGCCAGAAGGAGUGGGUCCACGUGGCACCUCUCCCAGACACCUACCGGGGCCCCUACCGGGAGGACCACCCCAACCCAGCUAUGGCCUAUGCCAACGAGGUGAAACGUGUGGUCAGCAGUGCACAGGAGAAGGGCAGGAAGAUUGCAGCCUUCUUCGCUGAGUCUCUGCCCAGUGUGGGAGGGCAGAUCAUUCCCCCUGCUGGCUACUUCUCCCAAGUGGCAGAGCACAUCCGCAAGGCCGGAGGGGUCUUUGUUGCAGAUGAGAUCCAGGUUGGCUUUGGCCGGGUAGGCAAGCACUUCUGGGCCUUCCAGCUCCAGGGAAAAGACUUCGUCCCUGACAUCGUCACCAUGGGCAAGUCCAUUGGCAACGGCCACCCUGUUGCCUGCGUGGCCGCAACCCAGCCUGUGGCGAGGGCAUUUGAAGCCACCGGCGUUGAGUACUUCAACACGUUUGGGGGCAGCCCAGUGUCCUGCGCUGUGGGGCUGGCCGUCCUGAAUGUCUUGGAGAAGGAGCAGCUCCAGGAUCAUGCCACCAGUGUAGGCAGCUUCCUGAUGCAGCUCCUCGGGCAGCAAAAAAUCAAACAUCCCAUCGUCGGGGAUGUCAGGGGUGUUGGGCUCUUCAUUGGUGUGGAUCUGAUCAAAGAUGAGGCCACAAGGACACCAGCAACUGAAGAGGCUGCCUACUUGGUAUCAAGGCUGAAGGAGAACUACGUUUUGCUGAGCACUGAUGGCCCUGGGAGGAACAPCCUGAAGUUUAAGCCCCCAAUGUGCUUCAGCCUGGACAAUGCACGGCAGGUGGUGGCAAAGCUGGAUGCCAUUCUGACUGACAUGGAAGAGAAGGUGAGAAGUUGUGAAACGCUGAGGCUCCAGCCCUAAGCCAGCCCUGCUCUGCCUAAGUGUACUCCAGAAGAAACUCAUCUCAPCCAAAUACACGCUAUUGAGAAGGCGAGCCUGACCUCCCUCUUACAGAUAAAGUCAGCUUUCAGAGGCUCAGGGUGGGGGGGCCUGCCCGAGGCCAPAAUGCUACCCACCCCCUCCUCCUAACCACUGGUCUGUUGGAAUAACCCAGAUGUCUGCAUCCCCUCAAGUCAGUCAAUUUCCUUUCUGUCCACUGGGGGUGGAAUGGGGUAGGGUGGGAUACUPUAAAGUGCUCCUGCUUAAAUAAAUUAGЖCCAGACCAGUGUAUUUCUAAAGAAAAUCCUGACAUGCACACCCAUUAAAAAUAGUACAUUUUACAGUG
Sequence (SHORT NAMES ENCODING)	CGCUCGAGUUCCUGCGCGGGACUGCCAAGGCACGACCACGGGCCGGAAGGCUGCCAGGCCCAGUGGGCAAGCGAAGAAAUGAACCACCGCAACGCGGGCGCUUCGGGGCGGGGCCGAGUGCGAACCUGAGCCCCAAAUCCCGACCCAGGCAGGGGCGGGGCCCGGAGCGGGGCCUUGGAGGCCCAGCCCGCGCGGCGACGUCUCCGCGUGGCGUCACGGCACCGACUGACGGCCACCCACCAUGGCCGCAGACCAGCGCCCGAAGGCCGACACGCUGGCCCUGAGGCAACGGCUCAUCAGGUACCCGGGCGGGGGGCGGGCGGCGGGGGGCGCGGGGCUGCGCGGAGAGGCACGCGCACGCACGACGCACGCACGCACGCACUACGCACGCGCCUCCGGCUAGGAAGCCGCUGCUACCCAUCCCGUCCGGCCGCUGCCCCGGCCCCGCUGGAGCUUCUAGGGCCCGAGGCGGGCGGCGCCGUUGGGCAGUCCCGGCGGGUGGUCUCCGGGGCCGCCUCCCCGACAGCGCCGUCUCCAGGCCGCCCAGUUCAGGAGACGGCCCCGCCCUCACCGCUGUUCGGCUGUGUCAGCCUCGCUUGGCAGCCUUUACUCCGGAGAAGACCUUCACCCUGGCGCCUGAGAGGACCUCACCCAGGGUGGCCCGUCAGCAGCACCUGGGCCUGGCUCGAGAGUGACCUGGGAGGGGGCUGAAAGGGCAGACAAGGGAGAGUCGGGGGAGUCGGUUCACAGGCAGCACACUUGACCUGUGAGGGGGCCCUCGGUGGGm6ACGGUGGGUGAGGUCGCCUCCCACUGGAGCUUAGGGCUGGCACCCAGCGAGGGGCAGCAGGGCCACGUGGCUGGCAAGGAGCUGUUUAGGGCUGAGAGCCAGGCACCUAAUGUUGGUGCCCUGGCCCAUCCCAUCGAAGACACGCGGCCUUAUGGAGUCCCCAUGGGACGGGGCAGCCACCUUUUCUCAGGAUCCGGGAGACUGACGCGGm6ACACAUGCAGAAAUGAGCAAGGAGGCCACAGAGGCUGAAAAUGCUUUCAGAAACAAUCCGAAGUUUCAGCGACUUGUUACCCCAUCUGCUUCCUGCUUUGCAACCACCUGUGGAGUGGAGAGACAAGCUCUUCCUGCAGm6ACUCUUUUUUCCCGAGGAUCCUGUUAAGAUUGUCCGGGCCCAAGGGCAGUACAUGUACGAUGAACAGGGGGCAGAAUACAUCGAUUGCAUCAGCAAUGUGGCGCACGUUGGGCACUGCCACCCUCUCGUGGUCCAAGCAGCACAUGAGCAGAACCAGGUGCUCAACACCAACAGCCGGUACCUGCAUGACAACAUCGUGGACUAUGCGCAGAGGCUGUCAGAGACCCUGCCGGAGCAGCUCUGUGUGUUCUAUUUCCUGAAUUCUGGGUCAGAAGCCAAUGACCUGGCCCUGAGGCUGGCUCGCCACUACACGGGACACCAGGACGUGGUGGUAUUAGAUCAUGCGUAUCACGGCCACCUGAGCUCCCUGAUUGACAUCAGUCCCUACAAGUUCCGCAACCUGGAUGGCCAGAAGGAGUGGGUCCACGUGGCACCUCUCCCAGACACCUACCGGGGCCCCUACCGGGAGGACCACCCCAACCCAGCUAUGGCCUAUGCCAACGAGGUGAAACGUGUGGUCAGCAGUGCACAGGAGAAGGGCAGGAAGAUUGCAGCCUUCUUCGCUGAGUCUCUGCCCAGUGUGGGAGGGCAGAUCAUUCCCCCUGCUGGCUACUUCUCCCAAGUGGCAGAGCACAUCCGCAAGGCCGGAGGGGUCUUUGUUGCAGAUGAGAUCCAGGUUGGCUUUGGCCGGGUAGGCAAGCACUUCUGGGCCUUCCAGCUCCAGGGAAAAGACUUCGUCCCUGACAUCGUCACCAUGGGCAAGUCCAUUGGCAACGGCCACCCUGUUGCCUGCGUGGCCGCAACCCAGCCUGUGGCGAGGGCAUUUGAAGCCACCGGCGUUGAGUACUUCAACACGUUUGGGGGCAGCCCAGUGUCCUGCGCUGUGGGGCUGGCCGUCCUGAAUGUCUUGGAGAAGGAGCAGCUCCAGGAUCAUGCCACCAGUGUAGGCAGCUUCCUGAUGCAGCUCCUCGGGCAGCAAAAAAUCAAACAUCCCAUCGUCGGGGAUGUCAGGGGUGUUGGGCUCUUCAUUGGUGUGGAUCUGAUCAAAGAUGAGGCCACAAGGACACCAGCAACUGAAGAGGCUGCCUACUUGGUAUCAAGGCUGAAGGAGAACUACGUUUUGCUGAGCACUGAUGGCCCUGGGAGGAACAYCCUGAAGUUUAAGCCCCCAAUGUGCUUCAGCCUGGACAAUGCACGGCAGGUGGUGGCAAAGCUGGAUGCCAUUCUGACUGACAUGGAAGAGAAGGUGAGAAGUUGUGAAACGCUGAGGCUCCAGCCCUAAGCCAGCCCUGCUCUGCCUAAGUGUACUCCAGAAGAAACUCAUCUCAYCCAAAUACACGCUAUUGAGAAGGCGAGCCUGACCUCCCUCUUACAGAUAAAGUCAGCUUUCAGAGGCUCAGGGUGGGGGGGCCUGCCCGAGGCCAYAAUGCUACCCACCCCCUCCUCCUAACCACUGGUCUGUUGGAAUAACCCAGAUGUCUGCAUCCCCUCAAGUCAGUCAAUUUCCUUUCUGUCCACUGGGGGUGGAAUGGGGUAGGGUGGGAUACUYUAAAGUGCUCCUGCUUAAAUAAAUUAGm6ACCAGACCAGUGUAUUUCUAAAGAAAAUCCUGACAUGCACACCCAUUAAAAAUAGUACAUUUUACAGUG
Sequence (MODOMICS CODE ENCODING)	CGCUCGAGUUCCUGCGCGGGACUGCCAAGGCACGACCACGGGCCGGAAGGCUGCCAGGCCCAGUGGGCAAGCGAAGAAAUGAACCACCGCAACGCGGGCGCUUCGGGGCGGGGCCGAGUGCGAACCUGAGCCCCAAAUCCCGACCCAGGCAGGGGCGGGGCCCGGAGCGGGGCCUUGGAGGCCCAGCCCGCGCGGCGACGUCUCCGCGUGGCGUCACGGCACCGACUGACGGCCACCCACCAUGGCCGCAGACCAGCGCCCGAAGGCCGACACGCUGGCCCUGAGGCAACGGCUCAUCAGGUACCCGGGCGGGGGGCGGGCGGCGGGGGGCGCGGGGCUGCGCGGAGAGGCACGCGCACGCACGACGCACGCACGCACGCACUACGCACGCGCCUCCGGCUAGGAAGCCGCUGCUACCCAUCCCGUCCGGCCGCUGCCCCGGCCCCGCUGGAGCUUCUAGGGCCCGAGGCGGGCGGCGCCGUUGGGCAGUCCCGGCGGGUGGUCUCCGGGGCCGCCUCCCCGACAGCGCCGUCUCCAGGCCGCCCAGUUCAGGAGACGGCCCCGCCCUCACCGCUGUUCGGCUGUGUCAGCCUCGCUUGGCAGCCUUUACUCCGGAGAAGACCUUCACCCUGGCGCCUGAGAGGACCUCACCCAGGGUGGCCCGUCAGCAGCACCUGGGCCUGGCUCGAGAGUGACCUGGGAGGGGGCUGAAAGGGCAGACAAGGGAGAGUCGGGGGAGUCGGUUCACAGGCAGCACACUUGACCUGUGAGGGGGCCCUCGGUGGG2000000006ACGGUGGGUGAGGUCGCCUCCCACUGGAGCUUAGGGCUGGCACCCAGCGAGGGGCAGCAGGGCCACGUGGCUGGCAAGGAGCUGUUUAGGGCUGAGAGCCAGGCACCUAAUGUUGGUGCCCUGGCCCAUCCCAUCGAAGACACGCGGCCUUAUGGAGUCCCCAUGGGACGGGGCAGCCACCUUUUCUCAGGAUCCGGGAGACUGACGCGG2000000006ACACAUGCAGAAAUGAGCAAGGAGGCCACAGAGGCUGAAAAUGCUUUCAGAAACAAUCCGAAGUUUCAGCGACUUGUUACCCCAUCUGCUUCCUGCUUUGCAACCACCUGUGGAGUGGAGAGACAAGCUCUUCCUGCAG2000000006ACUCUUUUUUCCCGAGGAUCCUGUUAAGAUUGUCCGGGCCCAAGGGCAGUACAUGUACGAUGAACAGGGGGCAGAAUACAUCGAUUGCAUCAGCAAUGUGGCGCACGUUGGGCACUGCCACCCUCUCGUGGUCCAAGCAGCACAUGAGCAGAACCAGGUGCUCAACACCAACAGCCGGUACCUGCAUGACAACAUCGUGGACUAUGCGCAGAGGCUGUCAGAGACCCUGCCGGAGCAGCUCUGUGUGUUCUAUUUCCUGAAUUCUGGGUCAGAAGCCAAUGACCUGGCCCUGAGGCUGGCUCGCCACUACACGGGACACCAGGACGUGGUGGUAUUAGAUCAUGCGUAUCACGGCCACCUGAGCUCCCUGAUUGACAUCAGUCCCUACAAGUUCCGCAACCUGGAUGGCCAGAAGGAGUGGGUCCACGUGGCACCUCUCCCAGACACCUACCGGGGCCCCUACCGGGAGGACCACCCCAACCCAGCUAUGGCCUAUGCCAACGAGGUGAAACGUGUGGUCAGCAGUGCACAGGAGAAGGGCAGGAAGAUUGCAGCCUUCUUCGCUGAGUCUCUGCCCAGUGUGGGAGGGCAGAUCAUUCCCCCUGCUGGCUACUUCUCCCAAGUGGCAGAGCACAUCCGCAAGGCCGGAGGGGUCUUUGUUGCAGAUGAGAUCCAGGUUGGCUUUGGCCGGGUAGGCAAGCACUUCUGGGCCUUCCAGCUCCAGGGAAAAGACUUCGUCCCUGACAUCGUCACCAUGGGCAAGUCCAUUGGCAACGGCCACCCUGUUGCCUGCGUGGCCGCAACCCAGCCUGUGGCGAGGGCAUUUGAAGCCACCGGCGUUGAGUACUUCAACACGUUUGGGGGCAGCCCAGUGUCCUGCGCUGUGGGGCUGGCCGUCCUGAAUGUCUUGGAGAAGGAGCAGCUCCAGGAUCAUGCCACCAGUGUAGGCAGCUUCCUGAUGCAGCUCCUCGGGCAGCAAAAAAUCAAACAUCCCAUCGUCGGGGAUGUCAGGGGUGUUGGGCUCUUCAUUGGUGUGGAUCUGAUCAAAGAUGAGGCCACAAGGACACCAGCAACUGAAGAGGCUGCCUACUUGGUAUCAAGGCUGAAGGAGAACUACGUUUUGCUGAGCACUGAUGGCCCUGGGAGGAACA2000000009UCCUGAAGUUUAAGCCCCCAAUGUGCUUCAGCCUGGACAAUGCACGGCAGGUGGUGGCAAAGCUGGAUGCCAUUCUGACUGACAUGGAAGAGAAGGUGAGAAGUUGUGAAACGCUGAGGCUCCAGCCCUAAGCCAGCCCUGCUCUGCCUAAGUGUACUCCAGAAGAAACUCAUCUCA2000000009UCCAAAUACACGCUAUUGAGAAGGCGAGCCUGACCUCCCUCUUACAGAUAAAGUCAGCUUUCAGAGGCUCAGGGUGGGGGGGCCUGCCCGAGGCCA2000000009UAAUGCUACCCACCCCCUCCUCCUAACCACUGGUCUGUUGGAAUAACCCAGAUGUCUGCAUCCCCUCAAGUCAGUCAAUUUCCUUUCUGUCCACUGGGGGUGGAAUGGGGUAGGGUGGGAUACU2000000009UUAAAGUGCUCCUGCUUAAAUAAAUUAG2000000006ACCAGACCAGUGUAUUUCUAAAGAAAAUCCUGACAUGCACACCCAUUAAAAAUAGUACAUUUUACAGUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	787	997	1136	2287	2464	2560	2684	2712
Modification Positions	m6A	m6A	m6A	Y	Y	Y	Y	m6A
Genomic Coordinates	5:178232005:-	5:178231795:-	5:178231511:-	5:178213053:-	5:178208900:-	5:178208804:-	5:178208680:-	5:178208652:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn WiQcrNTGZHPT Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq oZ9Kp5NX8Hv5 JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq oZ9Kp5NX8Hv5 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8