General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000505522
Gene ID:	ENSG00000281398
Gene Name:	SNHG4
Sequence (UNICHARACTER ENCODING)	CUGCGCCCUGCGGAGCUCCGAACACGUGCGCAGAGGCUGGCUGUGGCAGAUGCAACUGCAGGAUGACUUGAAAGUAGGGCAPCCUUCACCCAUCUGAAGGGAGGAAAUAGUGGCAGGUGACAGUCUGCAUGUGCAGUUUUCAGAUGCCUUCACCUGAAUGACAUCUACCUCCAUCAGGACCCCAGAUGUCUGACAGCCCUGUGUGACACCAAGAUAAGUAACGAUCCCGUUGAAGAUACCACAUUACACUUAGGCUCCUGUUGGCCAUGACAGCUUCUUAGACUUGUUUUUAAUGACCUUGACAGUUUUGUUUUUUUGUUUGUUUGUUUUUGAGACGGAGUCUCUGUCAUCCAGGCUGGAGUGCAAUGUAAUGGCUCAAUCUCAGCUCACUGCAACCUCUGCCUCCCGGGUUCAAGUGAUUCUCCUGCCUCAGCCUCCCCAGUAGCUGGGAUUACAGGCAUGAGCCACCGUGCCCGGCUGCCUCCUAAAUUCUCAAAACAUUCCAUUUUUAUUCUGUGGUCUUACUUUAUUCUGUCAUGUAGAGAAUAGUGGUUGAGCCUGUUGUCUUUUGAGAGUGGAUGCUGUAGUCCUUACAUGGCUGACUUUCAGCCCGUAAGCUUAUAGUAGAGGAUGGGGAUUUUGUUAUCAGCUGCUAAAAGGGAGAAGCCAAGCCCAGAACUAAGGGUUCUGAUGAGUUGAAGGAGAGGGAAGAUGCCCCUCAAGGCAAAGAGCCUCUGAGUUAGAAUCUGUGCUUCACCAGAGUGACAAUGGUAGAACUUCUCCUUCUCAGUAUUAAUUCUCCUGGAGAGAACUCUAGGGUUGUCUAAACCUGUUCAACUAGGCUGACUACCCCAGCAAGUGAUGGGUUGGACAUAAGGCAAAGAACAGGAGGGGUGAAAGGGGGCЖGЖЖCAGACAAGUUCUGUCCCAGCCUCUGCUACCUCUAACCCCAUGGCAUUCUAUCCUUUUCUACACUGGGCUUCCAUUUCUUACCCCAACAAUGAUCUGUUCUUCCAGGUGCCGUCAUUUAAUUUCCCAGACACUUGACCUCCUUCUGAUUUGUGUACUCCCUCCAAGGCUGAGUUGCAGUGAGUGACAAUAAUCUGUGCUAAUUACUUAUCUUGCCAGAAGACUCAAAGGGUUUAUGGCUUUUACUAACUGAACUCUAUGCUAGAUGUUAGGGAUAAAUGGUUAACAGGACACAGUUCUUGCUUAUCUUGCUAUGGUCUGUCAAGCCUUAUACAAUCUAGCCUUAUCUCUCUCACCGUCUUAUCUUUAUCACCCGUAGAUUCCCUUGUUGGCCACUGGUUUCUUUCAGUCCUUAAUUAGCCUUUUGUCACUACCUGUCUACACAUGCUGUUUUUCCCUUCUCAUUCCAUCUUGACAUUGUCUAUUUUGAGAUCUCAGCUCAGUUGCAGAGAAGCUGCCUUCCCCAUCUGGCAACCCAUUAUAUGUGUCAUAGUACCAUGUUGUACCAUAGAGCUAGACACAGGUGCCAUGUUGUGUCUUGAAAUGUAUUCACCAGCUUCCAAAGGUUUACCUCAAUCCCCUUUACUCAAGAAGCCUCAGUUCUACUGACAGUUGGUAAUAAUAACCUCUCUGUCAUAAUGUACCCAAAAUAGAGUAAGAAUAUCAUGCUUUUCAGUAAUACUCCAGUGAAUGAGGCUAAGAGUACCAUUUUUGUUCUUAUAAAAGAAUUUUUUUGGACAUGAAUACAAAGAUGUCAGGUUACCAAAUCAUUUGCUAGUAGAUCCUAACAAUAUCACCUAUAGGAAACUGAACGUAGCCUPUAAЖCAUUAAGUGAUGAUAAUGGAUUUGGCCGGGCGCGGUUGCCUAUAAUCCCAACACUGAGAGGCUGAGGUGGGUGGAUCACUUGAGGCCAGGACAGGACCAGCAUGGCCAACAUGGUGAAACCCCGUCUCUACAAAAGAAAAAAAUACAAAAAUUAGCUGGGUGUUGUGGUGUAUGCCUGUAAUCCCAACUAUUUGGGUGGCUGAGGCACGAGAAUCGCUUGAACUUGGAAGGCAGAGGUUGCAGUGAGCUGAGAUCGUGCCACUGCACUCCAGCCUGGGUGACAGACUGAGACAGUCUCAAAAAAAAAAAAAGAAAAUAAUGGAUUUGCAGAGACUUGCUAUUUAGAUUUCAGACAUCUGUUAЖCUAAAACACAUGUGUAGGCUUUUGUUACUUAUUUCAGUAAUCUGUAAAUAUCUPUAUAUUUGAGAAAAUUUGUGAGACAUCUUUGUGUAAAUUAUAЖCUUGAAGAACCUCUCUUACAAGCAGGCAUAUUGGUAAGUAGCUGCGAGGAUAUAЖCUUAUAACCAGAUUGAAGUGUAUAAUUAUAAUAUGUUAUUAUUCUGGGGUUCUAUAAAAAAUAAAAUCUUUGAAUCU
Sequence (SHORT NAMES ENCODING)	CUGCGCCCUGCGGAGCUCCGAACACGUGCGCAGAGGCUGGCUGUGGCAGAUGCAACUGCAGGAUGACUUGAAAGUAGGGCAYCCUUCACCCAUCUGAAGGGAGGAAAUAGUGGCAGGUGACAGUCUGCAUGUGCAGUUUUCAGAUGCCUUCACCUGAAUGACAUCUACCUCCAUCAGGACCCCAGAUGUCUGACAGCCCUGUGUGACACCAAGAUAAGUAACGAUCCCGUUGAAGAUACCACAUUACACUUAGGCUCCUGUUGGCCAUGACAGCUUCUUAGACUUGUUUUUAAUGACCUUGACAGUUUUGUUUUUUUGUUUGUUUGUUUUUGAGACGGAGUCUCUGUCAUCCAGGCUGGAGUGCAAUGUAAUGGCUCAAUCUCAGCUCACUGCAACCUCUGCCUCCCGGGUUCAAGUGAUUCUCCUGCCUCAGCCUCCCCAGUAGCUGGGAUUACAGGCAUGAGCCACCGUGCCCGGCUGCCUCCUAAAUUCUCAAAACAUUCCAUUUUUAUUCUGUGGUCUUACUUUAUUCUGUCAUGUAGAGAAUAGUGGUUGAGCCUGUUGUCUUUUGAGAGUGGAUGCUGUAGUCCUUACAUGGCUGACUUUCAGCCCGUAAGCUUAUAGUAGAGGAUGGGGAUUUUGUUAUCAGCUGCUAAAAGGGAGAAGCCAAGCCCAGAACUAAGGGUUCUGAUGAGUUGAAGGAGAGGGAAGAUGCCCCUCAAGGCAAAGAGCCUCUGAGUUAGAAUCUGUGCUUCACCAGAGUGACAAUGGUAGAACUUCUCCUUCUCAGUAUUAAUUCUCCUGGAGAGAACUCUAGGGUUGUCUAAACCUGUUCAACUAGGCUGACUACCCCAGCAAGUGAUGGGUUGGACAUAAGGCAAAGAACAGGAGGGGUGAAAGGGGGCm6AGm6Am6ACAGACAAGUUCUGUCCCAGCCUCUGCUACCUCUAACCCCAUGGCAUUCUAUCCUUUUCUACACUGGGCUUCCAUUUCUUACCCCAACAAUGAUCUGUUCUUCCAGGUGCCGUCAUUUAAUUUCCCAGACACUUGACCUCCUUCUGAUUUGUGUACUCCCUCCAAGGCUGAGUUGCAGUGAGUGACAAUAAUCUGUGCUAAUUACUUAUCUUGCCAGAAGACUCAAAGGGUUUAUGGCUUUUACUAACUGAACUCUAUGCUAGAUGUUAGGGAUAAAUGGUUAACAGGACACAGUUCUUGCUUAUCUUGCUAUGGUCUGUCAAGCCUUAUACAAUCUAGCCUUAUCUCUCUCACCGUCUUAUCUUUAUCACCCGUAGAUUCCCUUGUUGGCCACUGGUUUCUUUCAGUCCUUAAUUAGCCUUUUGUCACUACCUGUCUACACAUGCUGUUUUUCCCUUCUCAUUCCAUCUUGACAUUGUCUAUUUUGAGAUCUCAGCUCAGUUGCAGAGAAGCUGCCUUCCCCAUCUGGCAACCCAUUAUAUGUGUCAUAGUACCAUGUUGUACCAUAGAGCUAGACACAGGUGCCAUGUUGUGUCUUGAAAUGUAUUCACCAGCUUCCAAAGGUUUACCUCAAUCCCCUUUACUCAAGAAGCCUCAGUUCUACUGACAGUUGGUAAUAAUAACCUCUCUGUCAUAAUGUACCCAAAAUAGAGUAAGAAUAUCAUGCUUUUCAGUAAUACUCCAGUGAAUGAGGCUAAGAGUACCAUUUUUGUUCUUAUAAAAGAAUUUUUUUGGACAUGAAUACAAAGAUGUCAGGUUACCAAAUCAUUUGCUAGUAGAUCCUAACAAUAUCACCUAUAGGAAACUGAACGUAGCCUYUAAm6ACAUUAAGUGAUGAUAAUGGAUUUGGCCGGGCGCGGUUGCCUAUAAUCCCAACACUGAGAGGCUGAGGUGGGUGGAUCACUUGAGGCCAGGACAGGACCAGCAUGGCCAACAUGGUGAAACCCCGUCUCUACAAAAGAAAAAAAUACAAAAAUUAGCUGGGUGUUGUGGUGUAUGCCUGUAAUCCCAACUAUUUGGGUGGCUGAGGCACGAGAAUCGCUUGAACUUGGAAGGCAGAGGUUGCAGUGAGCUGAGAUCGUGCCACUGCACUCCAGCCUGGGUGACAGACUGAGACAGUCUCAAAAAAAAAAAAAGAAAAUAAUGGAUUUGCAGAGACUUGCUAUUUAGAUUUCAGACAUCUGUUAm6ACUAAAACACAUGUGUAGGCUUUUGUUACUUAUUUCAGUAAUCUGUAAAUAUCUYUAUAUUUGAGAAAAUUUGUGAGACAUCUUUGUGUAAAUUAUAm6ACUUGAAGAACCUCUCUUACAAGCAGGCAUAUUGGUAAGUAGCUGCGAGGAUAUAm6ACUUAUAACCAGAUUGAAGUGUAUAAUUAUAAUAUGUUAUUAUUCUGGGGUUCUAUAAAAAAUAAAAUCUUUGAAUCU
Sequence (MODOMICS CODE ENCODING)	CUGCGCCCUGCGGAGCUCCGAACACGUGCGCAGAGGCUGGCUGUGGCAGAUGCAACUGCAGGAUGACUUGAAAGUAGGGCA2000000009UCCUUCACCCAUCUGAAGGGAGGAAAUAGUGGCAGGUGACAGUCUGCAUGUGCAGUUUUCAGAUGCCUUCACCUGAAUGACAUCUACCUCCAUCAGGACCCCAGAUGUCUGACAGCCCUGUGUGACACCAAGAUAAGUAACGAUCCCGUUGAAGAUACCACAUUACACUUAGGCUCCUGUUGGCCAUGACAGCUUCUUAGACUUGUUUUUAAUGACCUUGACAGUUUUGUUUUUUUGUUUGUUUGUUUUUGAGACGGAGUCUCUGUCAUCCAGGCUGGAGUGCAAUGUAAUGGCUCAAUCUCAGCUCACUGCAACCUCUGCCUCCCGGGUUCAAGUGAUUCUCCUGCCUCAGCCUCCCCAGUAGCUGGGAUUACAGGCAUGAGCCACCGUGCCCGGCUGCCUCCUAAAUUCUCAAAACAUUCCAUUUUUAUUCUGUGGUCUUACUUUAUUCUGUCAUGUAGAGAAUAGUGGUUGAGCCUGUUGUCUUUUGAGAGUGGAUGCUGUAGUCCUUACAUGGCUGACUUUCAGCCCGUAAGCUUAUAGUAGAGGAUGGGGAUUUUGUUAUCAGCUGCUAAAAGGGAGAAGCCAAGCCCAGAACUAAGGGUUCUGAUGAGUUGAAGGAGAGGGAAGAUGCCCCUCAAGGCAAAGAGCCUCUGAGUUAGAAUCUGUGCUUCACCAGAGUGACAAUGGUAGAACUUCUCCUUCUCAGUAUUAAUUCUCCUGGAGAGAACUCUAGGGUUGUCUAAACCUGUUCAACUAGGCUGACUACCCCAGCAAGUGAUGGGUUGGACAUAAGGCAAAGAACAGGAGGGGUGAAAGGGGGC2000000006AG2000000006A2000000006ACAGACAAGUUCUGUCCCAGCCUCUGCUACCUCUAACCCCAUGGCAUUCUAUCCUUUUCUACACUGGGCUUCCAUUUCUUACCCCAACAAUGAUCUGUUCUUCCAGGUGCCGUCAUUUAAUUUCCCAGACACUUGACCUCCUUCUGAUUUGUGUACUCCCUCCAAGGCUGAGUUGCAGUGAGUGACAAUAAUCUGUGCUAAUUACUUAUCUUGCCAGAAGACUCAAAGGGUUUAUGGCUUUUACUAACUGAACUCUAUGCUAGAUGUUAGGGAUAAAUGGUUAACAGGACACAGUUCUUGCUUAUCUUGCUAUGGUCUGUCAAGCCUUAUACAAUCUAGCCUUAUCUCUCUCACCGUCUUAUCUUUAUCACCCGUAGAUUCCCUUGUUGGCCACUGGUUUCUUUCAGUCCUUAAUUAGCCUUUUGUCACUACCUGUCUACACAUGCUGUUUUUCCCUUCUCAUUCCAUCUUGACAUUGUCUAUUUUGAGAUCUCAGCUCAGUUGCAGAGAAGCUGCCUUCCCCAUCUGGCAACCCAUUAUAUGUGUCAUAGUACCAUGUUGUACCAUAGAGCUAGACACAGGUGCCAUGUUGUGUCUUGAAAUGUAUUCACCAGCUUCCAAAGGUUUACCUCAAUCCCCUUUACUCAAGAAGCCUCAGUUCUACUGACAGUUGGUAAUAAUAACCUCUCUGUCAUAAUGUACCCAAAAUAGAGUAAGAAUAUCAUGCUUUUCAGUAAUACUCCAGUGAAUGAGGCUAAGAGUACCAUUUUUGUUCUUAUAAAAGAAUUUUUUUGGACAUGAAUACAAAGAUGUCAGGUUACCAAAUCAUUUGCUAGUAGAUCCUAACAAUAUCACCUAUAGGAAACUGAACGUAGCCU2000000009UUAA2000000006ACAUUAAGUGAUGAUAAUGGAUUUGGCCGGGCGCGGUUGCCUAUAAUCCCAACACUGAGAGGCUGAGGUGGGUGGAUCACUUGAGGCCAGGACAGGACCAGCAUGGCCAACAUGGUGAAACCCCGUCUCUACAAAAGAAAAAAAUACAAAAAUUAGCUGGGUGUUGUGGUGUAUGCCUGUAAUCCCAACUAUUUGGGUGGCUGAGGCACGAGAAUCGCUUGAACUUGGAAGGCAGAGGUUGCAGUGAGCUGAGAUCGUGCCACUGCACUCCAGCCUGGGUGACAGACUGAGACAGUCUCAAAAAAAAAAAAAGAAAAUAAUGGAUUUGCAGAGACUUGCUAUUUAGAUUUCAGACAUCUGUUA2000000006ACUAAAACACAUGUGUAGGCUUUUGUUACUUAUUUCAGUAAUCUGUAAAUAUCU2000000009UUAUAUUUGAGAAAAUUUGUGAGACAUCUUUGUGUAAAUUAUA2000000006ACUUGAAGAACCUCUCUUACAAGCAGGCAUAUUGGUAAGUAGCUGCGAGGAUAUA2000000006ACUUAUAACCAGAUUGAAGUGUAUAAUUAUAAUAUGUUAUUAUUCUGGGGUUCUAUAAAAAAUAAAAUCUUUGAAUCU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	82	906	908	909	1787	1791	2154	2208	2251	2306
Modification Positions	Y	m6A	m6A	m6A	Y	m6A	m6A	Y	m6A	m6A
Genomic Coordinates	5:139278347:+	5:139283422:+	5:139283424:+	5:139283425:+	5:139284303:+	5:139284307:+	5:139284670:+	5:139284724:+	5:139284767:+	5:139284822:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	Lny8GcCeVGc9 LZJKems7W2wi	Lny8GcCeVGc9 LZJKems7W2wi	Lny8GcCeVGc9 LZJKems7W2wi	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8