General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000651386
Gene ID:	ENSG00000185129
Gene Name:	PURA
Sequence (UNICHARACTER ENCODING)	GCCACGACUUGCCGUCUGCGGCGGCGGCGGCGGCGGCGAGCGGAUCCCGCAGGGGAAGGAGGAGGAGGAGGGAGAGCCAAGGGGGCUGUGAGUGAGCGGGAGAAGCAGGGUGUGAGCCGGACUUGCCCAUGGGAGGGAGAGCGAGCGAGAGCCGAGCCAGCCAUCCGAGCCGCCUCCUCCUCCUCCCCUCGGCGUCCCGCCCCCGCCCGCCAGCCCGCCCUCCUUCCUCCUCAGCCCGCAGAGCCUAAGUGAGGCGCAGCUCGGCUAGCGCCGCUGUCCAGGACAGGUGUGCGCGCGCGCGCCCUCCUCCCCUCCCCCCUUCCUCGCGCCUGUCUCGCGCGCGCCCUCCCUCCCGCCAGCCUGCGCCCUCCCUCACCUGCGGCAGGACAGCGCCCGCCCGCCCGGAUCUCGCGAGAGUGGCUGACUGGCUGUGGGGGUUGCGGCGGCAGCAGGCGGAGCCGGGGAGGGAAAGCAGCGGCGGCUGAGGCGACUGAGGCGGCGGGCGGAGCGGCAGGCGGCGGCGGCGCGGCAGCGGAGCGCAGCAUCAUGGCGGACCGAGACAGCGGCAGCGAGCAGGGUGGUGCGGCGCUGGGUUCGGGCGGCUCCCUGGGGCACCCCGGCUCGGGCUCAGGCUCCGGCGGGGGCGGUGGUGGCGGCGGGGGCGGCGGCGGCAGUGGCGGCGGCGGCGGCGGGGCCCCAGGGGGGCUGCAGCACGAGACGCAGGAGCUGGCCUCCAAGCGGGUGGЖCAUCCAGAACAAGCGCUUCUACCUGGACGUGAAGCAGAACGCCAAGGGCCGCUUCCUGAAGAUCGCCGAGGUGGGCGCGGGCGGCAACAAGAGCCGCCUUACUCUCUCCAUGUCAGUGGCCGUGGAGUUCCGCGACUACCUGGGCGACUUCAUCGAGCACUACGCGCAGCUGGGCCCCAGCCAGCCGCCGGЖCCUGGCCCAGGCGCAGGЖCGAGCCGCGCCGGGCGCUCAAAAGCGAGUUCCUGGUGCGCGAGAACCGCAAGUACUACAUGGAUCUCAAGGAGAACCAGCGCGGCCGCUUCCUGCGCAUCCGCCAGACGGUCAACCGGGGGCCUGGCCUGGGCUCCACGCAGGGCCAGACCAUUGCGCUGCCCGCGCAGGGGCUCAUCGAGUUCCGUGACGCUCUGGCCAAGCUCAUCGACGACUACGGAGUGGAGGAGGAGCCGGCCGAGCUGCCCGAGGGCACCUCCUUGЖCUGUGGЖCAACAAGCGCUUCUUCUUCGAUGUGGGCUCCAACAAGUACGGCGUGUUUAUGCGAGUGAGCGAGGUGAAGCCCACCUAUCGCAACUCCAUCACCGUGCCCUACAAGGUGUGGGCCAAGUUCGGЖCACACCUUCUGCAAGUACUCGGAGGAGAUGAAGAAGAUUCAAGAGAAGCAGAGGGAGAAGCGGGCUGCCUGUGAGCAGCUUCACCAGCAGCAACAGCAGCAGCAGGAGGAGЖCCGCCGCUGCCACCCUGCUACUGCAGGGUGAGGAAGAAGGGGAAGAAGAUUGAUCAAЖCUGAAUGAAACCCCCACACACACACACAUGCAUACACACACACACACAGCCACACACACAGAAAAUAUACUGUAAAGAAAGAGAGAAAAUAAAAAGUUAAAAAGUUAAAAAAAAAAAAAAACCUGUUAЖCUCCAAGGGAGCACCACCCACAGAACCUCCACCAACUGЖCAGUUUCUCUUCUUGACUUGCCACCCAUCGCUGGAUGUUGUCCACUPUAUCCACCAUAUAAAЖCAGUAAGCAGCUGCUAAAAACAAAAAAAAUACAAAAAGUAAUAACAUUAUAUGAЖCUGUGUUUCCUACUUGAUUAAAAAAUAUAAAGAЖCUGAGUGUUUAUUUCCCUAAUUAACCAAGAЖCUUUUGUACACGUUUAAGCUAUUAUUAUUAAAAAGUGUUUGCAAAAUG
Sequence (SHORT NAMES ENCODING)	GCCACGACUUGCCGUCUGCGGCGGCGGCGGCGGCGGCGAGCGGAUCCCGCAGGGGAAGGAGGAGGAGGAGGGAGAGCCAAGGGGGCUGUGAGUGAGCGGGAGAAGCAGGGUGUGAGCCGGACUUGCCCAUGGGAGGGAGAGCGAGCGAGAGCCGAGCCAGCCAUCCGAGCCGCCUCCUCCUCCUCCCCUCGGCGUCCCGCCCCCGCCCGCCAGCCCGCCCUCCUUCCUCCUCAGCCCGCAGAGCCUAAGUGAGGCGCAGCUCGGCUAGCGCCGCUGUCCAGGACAGGUGUGCGCGCGCGCGCCCUCCUCCCCUCCCCCCUUCCUCGCGCCUGUCUCGCGCGCGCCCUCCCUCCCGCCAGCCUGCGCCCUCCCUCACCUGCGGCAGGACAGCGCCCGCCCGCCCGGAUCUCGCGAGAGUGGCUGACUGGCUGUGGGGGUUGCGGCGGCAGCAGGCGGAGCCGGGGAGGGAAAGCAGCGGCGGCUGAGGCGACUGAGGCGGCGGGCGGAGCGGCAGGCGGCGGCGGCGCGGCAGCGGAGCGCAGCAUCAUGGCGGACCGAGACAGCGGCAGCGAGCAGGGUGGUGCGGCGCUGGGUUCGGGCGGCUCCCUGGGGCACCCCGGCUCGGGCUCAGGCUCCGGCGGGGGCGGUGGUGGCGGCGGGGGCGGCGGCGGCAGUGGCGGCGGCGGCGGCGGGGCCCCAGGGGGGCUGCAGCACGAGACGCAGGAGCUGGCCUCCAAGCGGGUGGm6ACAUCCAGAACAAGCGCUUCUACCUGGACGUGAAGCAGAACGCCAAGGGCCGCUUCCUGAAGAUCGCCGAGGUGGGCGCGGGCGGCAACAAGAGCCGCCUUACUCUCUCCAUGUCAGUGGCCGUGGAGUUCCGCGACUACCUGGGCGACUUCAUCGAGCACUACGCGCAGCUGGGCCCCAGCCAGCCGCCGGm6ACCUGGCCCAGGCGCAGGm6ACGAGCCGCGCCGGGCGCUCAAAAGCGAGUUCCUGGUGCGCGAGAACCGCAAGUACUACAUGGAUCUCAAGGAGAACCAGCGCGGCCGCUUCCUGCGCAUCCGCCAGACGGUCAACCGGGGGCCUGGCCUGGGCUCCACGCAGGGCCAGACCAUUGCGCUGCCCGCGCAGGGGCUCAUCGAGUUCCGUGACGCUCUGGCCAAGCUCAUCGACGACUACGGAGUGGAGGAGGAGCCGGCCGAGCUGCCCGAGGGCACCUCCUUGm6ACUGUGGm6ACAACAAGCGCUUCUUCUUCGAUGUGGGCUCCAACAAGUACGGCGUGUUUAUGCGAGUGAGCGAGGUGAAGCCCACCUAUCGCAACUCCAUCACCGUGCCCUACAAGGUGUGGGCCAAGUUCGGm6ACACACCUUCUGCAAGUACUCGGAGGAGAUGAAGAAGAUUCAAGAGAAGCAGAGGGAGAAGCGGGCUGCCUGUGAGCAGCUUCACCAGCAGCAACAGCAGCAGCAGGAGGAGm6ACCGCCGCUGCCACCCUGCUACUGCAGGGUGAGGAAGAAGGGGAAGAAGAUUGAUCAAm6ACUGAAUGAAACCCCCACACACACACACAUGCAUACACACACACACACAGCCACACACACAGAAAAUAUACUGUAAAGAAAGAGAGAAAAUAAAAAGUUAAAAAGUUAAAAAAAAAAAAAAACCUGUUAm6ACUCCAAGGGAGCACCACCCACAGAACCUCCACCAACUGm6ACAGUUUCUCUUCUUGACUUGCCACCCAUCGCUGGAUGUUGUCCACUYUAUCCACCAUAUAAAm6ACAGUAAGCAGCUGCUAAAAACAAAAAAAAUACAAAAAGUAAUAACAUUAUAUGAm6ACUGUGUUUCCUACUUGAUUAAAAAAUAUAAAGAm6ACUGAGUGUUUAUUUCCCUAAUUAACCAAGAm6ACUUUUGUACACGUUUAAGCUAUUAUUAUUAAAAAGUGUUUGCAAAAUG
Sequence (MODOMICS CODE ENCODING)	GCCACGACUUGCCGUCUGCGGCGGCGGCGGCGGCGGCGAGCGGAUCCCGCAGGGGAAGGAGGAGGAGGAGGGAGAGCCAAGGGGGCUGUGAGUGAGCGGGAGAAGCAGGGUGUGAGCCGGACUUGCCCAUGGGAGGGAGAGCGAGCGAGAGCCGAGCCAGCCAUCCGAGCCGCCUCCUCCUCCUCCCCUCGGCGUCCCGCCCCCGCCCGCCAGCCCGCCCUCCUUCCUCCUCAGCCCGCAGAGCCUAAGUGAGGCGCAGCUCGGCUAGCGCCGCUGUCCAGGACAGGUGUGCGCGCGCGCGCCCUCCUCCCCUCCCCCCUUCCUCGCGCCUGUCUCGCGCGCGCCCUCCCUCCCGCCAGCCUGCGCCCUCCCUCACCUGCGGCAGGACAGCGCCCGCCCGCCCGGAUCUCGCGAGAGUGGCUGACUGGCUGUGGGGGUUGCGGCGGCAGCAGGCGGAGCCGGGGAGGGAAAGCAGCGGCGGCUGAGGCGACUGAGGCGGCGGGCGGAGCGGCAGGCGGCGGCGGCGCGGCAGCGGAGCGCAGCAUCAUGGCGGACCGAGACAGCGGCAGCGAGCAGGGUGGUGCGGCGCUGGGUUCGGGCGGCUCCCUGGGGCACCCCGGCUCGGGCUCAGGCUCCGGCGGGGGCGGUGGUGGCGGCGGGGGCGGCGGCGGCAGUGGCGGCGGCGGCGGCGGGGCCCCAGGGGGGCUGCAGCACGAGACGCAGGAGCUGGCCUCCAAGCGGGUGG2000000006ACAUCCAGAACAAGCGCUUCUACCUGGACGUGAAGCAGAACGCCAAGGGCCGCUUCCUGAAGAUCGCCGAGGUGGGCGCGGGCGGCAACAAGAGCCGCCUUACUCUCUCCAUGUCAGUGGCCGUGGAGUUCCGCGACUACCUGGGCGACUUCAUCGAGCACUACGCGCAGCUGGGCCCCAGCCAGCCGCCGG2000000006ACCUGGCCCAGGCGCAGG2000000006ACGAGCCGCGCCGGGCGCUCAAAAGCGAGUUCCUGGUGCGCGAGAACCGCAAGUACUACAUGGAUCUCAAGGAGAACCAGCGCGGCCGCUUCCUGCGCAUCCGCCAGACGGUCAACCGGGGGCCUGGCCUGGGCUCCACGCAGGGCCAGACCAUUGCGCUGCCCGCGCAGGGGCUCAUCGAGUUCCGUGACGCUCUGGCCAAGCUCAUCGACGACUACGGAGUGGAGGAGGAGCCGGCCGAGCUGCCCGAGGGCACCUCCUUG2000000006ACUGUGG2000000006ACAACAAGCGCUUCUUCUUCGAUGUGGGCUCCAACAAGUACGGCGUGUUUAUGCGAGUGAGCGAGGUGAAGCCCACCUAUCGCAACUCCAUCACCGUGCCCUACAAGGUGUGGGCCAAGUUCGG2000000006ACACACCUUCUGCAAGUACUCGGAGGAGAUGAAGAAGAUUCAAGAGAAGCAGAGGGAGAAGCGGGCUGCCUGUGAGCAGCUUCACCAGCAGCAACAGCAGCAGCAGGAGGAG2000000006ACCGCCGCUGCCACCCUGCUACUGCAGGGUGAGGAAGAAGGGGAAGAAGAUUGAUCAA2000000006ACUGAAUGAAACCCCCACACACACACACAUGCAUACACACACACACACAGCCACACACACAGAAAAUAUACUGUAAAGAAAGAGAGAAAAUAAAAAGUUAAAAAGUUAAAAAAAAAAAAAAACCUGUUA2000000006ACUCCAAGGGAGCACCACCCACAGAACCUCCACCAACUG2000000006ACAGUUUCUCUUCUUGACUUGCCACCCAUCGCUGGAUGUUGUCCACU2000000009UUAUCCACCAUAUAAA2000000006ACAGUAAGCAGCUGCUAAAAACAAAAAAAAUACAAAAAGUAAUAACAUUAUAUGA2000000006ACUGUGUUUCCUACUUGAUUAAAAAAUAUAAAGA2000000006ACUGAGUGUUUAUUUCCCUAAUUAACCAAGA2000000006ACUUUUGUACACGUUUAAGCUAUUAUUAUUAAAAAGUGUUUGCAAAAUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	746	938	956	1219	1226	1350	1462	1520	1649	1688	1735	1751	1806	1840	1871
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y	m6A	m6A	m6A	m6A
Genomic Coordinates	5:140114381:+	5:140114573:+	5:140114591:+	5:140114854:+	5:140114861:+	5:140114985:+	5:140115097:+	5:140115155:+	5:140115284:+	5:140115323:+	5:140115370:+	5:140115386:+	5:140115441:+	5:140115475:+	5:140115506:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se WiQcrNTGZHPT Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BkoLW2CBToyL Lny8GcCeVGc9 UKen6WEino9G Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 93arJtwJmuS9 Lny8GcCeVGc9 UKen6WEino9G Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	gZuvgwMuBfgh msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 Yfn77uLS5tv8	msuJfBpJvM5H Q36pf44ZRvxu QmcpiJ88DBDn VyCX26p5UBRL BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	KRfQJWH4K5KH Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8