General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000513813
Gene ID:	ENSG00000164902
Gene Name:	PHAX
Sequence (UNICHARACTER ENCODING)	UGUUCCUUUUUGUAGAAUGGUAGUCGAAGAAGAACACCAGGUGGAGUUUUUCUGAAUCUCUUGAAAAACACUCCUAGUAUCAGCGAGGAACAAAUUAAGGACAUUUUCUACAUUGAAAACCAAAAGGAAUAUGAAAAUAAAAAAGCUGCUAGGAAGAGGAGAACACAAGUGUUGGGGAAAAAGAUGAAACAAGCUAUUAAAAGUCUAAAUUUUCAAGAAGAUGAUGAUACAUCACGAGAAЖCUUUUGCAAGUGACACGAAUGAGGCCUUGGCCUCUCUUGAUGAGUCACAGGAAGGЖCAUGCAGAAGCCAAGUUGGAGGCAGAGGAAGCCAUUGAAGUUGAUCAUUCUCAUGAUPUGGЖCAUCUUUUAAGUACAUUUUCAACAGUUUGAGGЖCUAAGCCUUUCUAAAAUAACAUUGUAAUAAACCAUUUUUACUGAGAUUGCAACGUUUUGCACUGAUAAACAUGAGAAUCUGGAGGAAAGACAAUUGUUUUCUUGUUUAAAAUAUGUGUGGAAAGGAAUGCAAUUGAUAGAACAUUUAAAGAUAUAUCUGACAAAAUACUUAAGAGUAUAUAGCACAGGAUUUAAUUUCUCAAUCUGUUGCAUGUGCUAAUUAUGAGUAUUACUAGUUGAUAAUCAGUUUUGUCUAGGUCAUAЖCAUACCAUUUGUAAGUUUGUUUGCUUUUUCAGGUUUAUCUUUGCAGUGAAUUAUGCUUUGCUPUAAAACAUUCCGCUAAAAUCAUAAUGGGACAUAUAAAUUAUUAAGCUGUUAGAAAUGCAUUCAAAUUUGUUUUUUCUGUGUUCUAAGAACUCAGGCAAUUUUAAGGAUAAAAACUAACAUUGGCCAGGCACGGUGGCUCACGCCUGUAAUCCCAACACUUUAGGAGACCAAGGCGGGCAGAUCACUUGAGGUCAGAAGUUUGAGACCAGCCAGGCCAACAUGGUGAAACUUCAUCUCUACUAAAAAUACAAAAACUAGCCAGGUGUGGUUCUCCAUGCCUAUAAU
Sequence (SHORT NAMES ENCODING)	UGUUCCUUUUUGUAGAAUGGUAGUCGAAGAAGAACACCAGGUGGAGUUUUUCUGAAUCUCUUGAAAAACACUCCUAGUAUCAGCGAGGAACAAAUUAAGGACAUUUUCUACAUUGAAAACCAAAAGGAAUAUGAAAAUAAAAAAGCUGCUAGGAAGAGGAGAACACAAGUGUUGGGGAAAAAGAUGAAACAAGCUAUUAAAAGUCUAAAUUUUCAAGAAGAUGAUGAUACAUCACGAGAAm6ACUUUUGCAAGUGACACGAAUGAGGCCUUGGCCUCUCUUGAUGAGUCACAGGAAGGm6ACAUGCAGAAGCCAAGUUGGAGGCAGAGGAAGCCAUUGAAGUUGAUCAUUCUCAUGAUYUGGm6ACAUCUUUUAAGUACAUUUUCAACAGUUUGAGGm6ACUAAGCCUUUCUAAAAUAACAUUGUAAUAAACCAUUUUUACUGAGAUUGCAACGUUUUGCACUGAUAAACAUGAGAAUCUGGAGGAAAGACAAUUGUUUUCUUGUUUAAAAUAUGUGUGGAAAGGAAUGCAAUUGAUAGAACAUUUAAAGAUAUAUCUGACAAAAUACUUAAGAGUAUAUAGCACAGGAUUUAAUUUCUCAAUCUGUUGCAUGUGCUAAUUAUGAGUAUUACUAGUUGAUAAUCAGUUUUGUCUAGGUCAUAm6ACAUACCAUUUGUAAGUUUGUUUGCUUUUUCAGGUUUAUCUUUGCAGUGAAUUAUGCUUUGCUYUAAAACAUUCCGCUAAAAUCAUAAUGGGACAUAUAAAUUAUUAAGCUGUUAGAAAUGCAUUCAAAUUUGUUUUUUCUGUGUUCUAAGAACUCAGGCAAUUUUAAGGAUAAAAACUAACAUUGGCCAGGCACGGUGGCUCACGCCUGUAAUCCCAACACUUUAGGAGACCAAGGCGGGCAGAUCACUUGAGGUCAGAAGUUUGAGACCAGCCAGGCCAACAUGGUGAAACUUCAUCUCUACUAAAAAUACAAAAACUAGCCAGGUGUGGUUCUCCAUGCCUAUAAU
Sequence (MODOMICS CODE ENCODING)	UGUUCCUUUUUGUAGAAUGGUAGUCGAAGAAGAACACCAGGUGGAGUUUUUCUGAAUCUCUUGAAAAACACUCCUAGUAUCAGCGAGGAACAAAUUAAGGACAUUUUCUACAUUGAAAACCAAAAGGAAUAUGAAAAUAAAAAAGCUGCUAGGAAGAGGAGAACACAAGUGUUGGGGAAAAAGAUGAAACAAGCUAUUAAAAGUCUAAAUUUUCAAGAAGAUGAUGAUACAUCACGAGAA2000000006ACUUUUGCAAGUGACACGAAUGAGGCCUUGGCCUCUCUUGAUGAGUCACAGGAAGG2000000006ACAUGCAGAAGCCAAGUUGGAGGCAGAGGAAGCCAUUGAAGUUGAUCAUUCUCAUGAU2000000009UUGG2000000006ACAUCUUUUAAGUACAUUUUCAACAGUUUGAGG2000000006ACUAAGCCUUUCUAAAAUAACAUUGUAAUAAACCAUUUUUACUGAGAUUGCAACGUUUUGCACUGAUAAACAUGAGAAUCUGGAGGAAAGACAAUUGUUUUCUUGUUUAAAAUAUGUGUGGAAAGGAAUGCAAUUGAUAGAACAUUUAAAGAUAUAUCUGACAAAAUACUUAAGAGUAUAUAGCACAGGAUUUAAUUUCUCAAUCUGUUGCAUGUGCUAAUUAUGAGUAUUACUAGUUGAUAAUCAGUUUUGUCUAGGUCAUA2000000006ACAUACCAUUUGUAAGUUUGUUUGCUUUUUCAGGUUUAUCUUUGCAGUGAAUUAUGCUUUGCU2000000009UUAAAACAUUCCGCUAAAAUCAUAAUGGGACAUAUAAAUUAUUAAGCUGUUAGAAAUGCAUUCAAAUUUGUUUUUUCUGUGUUCUAAGAACUCAGGCAAUUUUAAGGAUAAAAACUAACAUUGGCCAGGCACGGUGGCUCACGCCUGUAAUCCCAACACUUUAGGAGACCAAGGCGGGCAGAUCACUUGAGGUCAGAAGUUUGAGACCAGCCAGGCCAACAUGGUGAAACUUCAUCUCUACUAAAAAUACAAAAACUAGCCAGGUGUGGUUCUCCAUGCCUAUAAU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	241	297	355	359	392	655	718
Modification Positions	m6A	m6A	Y	m6A	m6A	m6A	Y
Genomic Coordinates	5:126624716:+	5:126624772:+	5:126624830:+	5:126624834:+	5:126624867:+	5:126625130:+	5:126625193:+
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	4HMi5ykupT9V jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 93arJtwJmuS9 BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	VyCX26p5UBRL 8cMbzB4aD5Se 93arJtwJmuS9 BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP	BtsJQJ3DteUq dknfVe6BK8aP