General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000643347
Gene ID:	ENSG00000148019
Gene Name:	CEP78
Sequence (UNICHARACTER ENCODING)	ACCGGCUUGAAUCCCGGCGCCUCAGAGGACUAUGAGGCGGGCGCCAACUGCUUGGGCCGCAGGGCGGGAGGCAGCGCGGGAGUGGGGCGUUGAGGGGCCGGCCUAGCUUGGGGCUCUGGCCUUGCGUCUUCCGACCGAAUCACCGCUCCUGAGCCCGGUGCGGGGCUGCCGCUAUCGCCUGGCCGUGGGUGCCGGAGCGGCCGGGUUGCGACUCAGCGUUCUUGGGUGGGCGCGGGCGGCGUCUCCGCGGCGGGCAUCCCCCGAGGCCGCCCUCGGGCCAUGAUCGACUCCGUGAAGCUGCGCCGCGACAGCGCGGCGGACUUCUUCUCCCACUACGAGUACCUGUGCGCGCUGCAGAACUCGGUGCCGCUGCCCGCCGUGCGCGCCUGUCUCCGGGAGGGCGUGCUGGAUUUCAACGCCGACCGCCUCCGCGGGGUGGACUGGGCGCCUCUGCUGAGCACCCUCAAGAUCAAUAAAGACCUGCCCUUGGUCUCCAUCAAGAGCUUCUUCCAGCCCUGGCUGGGGGACACAGGUUCUGACAUGAAUAAAUUUUGCAGAAGUCGUGUUCCUGCGAUAAGAUACAAAGAUGUGACCUUCCAGUUGUGUAAAGCUCUUAAAGGCUGUUUAAGUAUAUCAAGUGUGCUAAAGAACCUGGAGCUAAAUGGACUAAUUCUGAGAGAGAGGGAUUUAACUAUUCUAGCAAAGGGAUUGAAUAAAUCGGCUUCUUUGGUGCACCUGUCUCUUGCAAAUUGUCCAAUUGGAGAUGGAGGUUUAGAAAUUAUUUGUCAAGGUAUAAAGAGCUCUAUCACUCUUAAGACAGUCAACUUCACAGGAUGUAAUCUGACAUGGCAGGGAGCAGAUCACAUGGCCAAGAUCUUAAAGUAUCAGACCAUGAGAAGGCAUGAAGAAACCUGGGCUGAGAGUCUUCGCUAUAGGAGACCUGAUCUUGACUGUAUGGCUGGCUUAAGACGUAUCACACUGAAUUGCAACACACUUAUUGGUGACCUAGGUGCAUGUGCUUUUGCAGACUCUCUCAGUGAGGAUUUAUGGCUGAGAGCUCUUGACCUGCAACAGUGCGGCCUCACCAAUGAAGGAGCAAAGGCUUUGCUAGAGGCCCUUGAAACCAAUACAACUCUGGUCGUUCUGGAUAUAAGAAAAAAUCCACUCAUUGAUCAUUCUAUGAUGAAAGCAGUUAUCAAAAAAGUCCUCCAGAAUGGAAGGAGUGCCAAAUCAGAGUACCAGUGGAUAACUUCUCCAUCAGUGAAGGAACCAUCCAAAACUGCUAAACAGAAAAGGAGAACUAUAAUUCUAGGAAGUGGUCACAAAGGAAAAGCUACUAUUAGAAUUGUAAUUUGGAGACACAGAGGAUUGGCUACAAAGAAACCUGUAAGUAGUGGCAGAAAACACUCCCUUGGUAAAGAAUAUUAUGCGCCCGCACCUCUUCCACCUGGUGUGUCUGGUUUCUUGCCGUGGCGUACUGCAGAACGUGCAAAAAGACACAGGGGUUUCCCAUUAAUCAAAACACGUGAUAUAUGUAAUCAGUUGCAGCAACCAGGUUUUCCUGUGACUGUGACAGUAGAGAGUCCUUCAPCCUCUGAAGUUGAAGAGGUUGAUGAUUCUUCAGAGAGUGUUCAUGAAGUGCCUGAGAAAACUAGUAUAGAACAAGAAGCAUUACAGGAAAAACUGGAGGAGUGCCUAAAGCAGUUAAAGGAAGAAAGAGUGAUAAGGCUUAAGGUUGAUAAACGAGUCAGUGAGCUGGAACAUGAAAAUGCCCAGUUAAGAAAUAUAAAUUUCUCUUUGUCUGAAGCCCUUCAUGCACAGUCAUUGACAAAUAUGAUCCUGGAUGAUGAAGGUGUUUUGGGCAGCAUUGAGAAUUCUUUUCAGAAGUUUCAUGCUUUCUUGGAUCUCCUUAAAGAUGCUGGGCUUGGGCAGCUUGCCACAAUGGCUGGGAUAGAUCAGUCAGAUUUUCAAUUACUAGGUCAPCCCCAGAUGACUUCUACUGUUAGUAAUCCACCUAAAGAAGAAAAGAAGGCGCUUGAAGAUGAAAAACCAGAACCGAAGCAGAAUGCCCUAGGGCAAAUGCAAAAUAUCCAGUUUCAGAAAAUUACAGGUGAUGCUAGAAUUCCUUUGCCUCUCGACUCCUUUCCUGUCCCAGUUUCUACUCCAGAGGGCUUAGGAACUUCCAGCAACAACCUAGGAGUCCCAGCUACUGAGCAGCGGCAGGAGUCUUUUGAAGGAUUCAUUGCUAGAAUGUGUUCUCCUUCACCAGAUGCGACUUCUGGAACUGGAAGUCAAAGAAAAGAAGAGGAGUUGUCCAGAAAUAGCAGAUCUUCUUCAGAGAAAAAGACCAAAACAGGUGAAUAUACCAAAAAACACUCUGAUAAGCAACACCCUGGAAAGGЖCCUGCAUUCCUGAUCUGЖCUGUCCUGAAAACCAGAAAAGCAAAGAAACUAGGGAAACUAGUUCUUUGGUUAAUGAACCAAUUAAAAGUAGGUCUUUGAAAAAAUACGUUUCUGUCAAGAAAGAAAAUAGAAUAGUGACUGUUUCAPCCAAGACAAAUAAAAGUAAAUCCAGUCCACUAGAЖCAUUCUGAAAGUGAUACUCUUGGAUGUGAUUUUGAAUUUCAAGAAAGCAUCCAUUCUCUAUCACACCUUUCAUAUGACUAAAUCUUUUGAAACUA
Sequence (SHORT NAMES ENCODING)	ACCGGCUUGAAUCCCGGCGCCUCAGAGGACUAUGAGGCGGGCGCCAACUGCUUGGGCCGCAGGGCGGGAGGCAGCGCGGGAGUGGGGCGUUGAGGGGCCGGCCUAGCUUGGGGCUCUGGCCUUGCGUCUUCCGACCGAAUCACCGCUCCUGAGCCCGGUGCGGGGCUGCCGCUAUCGCCUGGCCGUGGGUGCCGGAGCGGCCGGGUUGCGACUCAGCGUUCUUGGGUGGGCGCGGGCGGCGUCUCCGCGGCGGGCAUCCCCCGAGGCCGCCCUCGGGCCAUGAUCGACUCCGUGAAGCUGCGCCGCGACAGCGCGGCGGACUUCUUCUCCCACUACGAGUACCUGUGCGCGCUGCAGAACUCGGUGCCGCUGCCCGCCGUGCGCGCCUGUCUCCGGGAGGGCGUGCUGGAUUUCAACGCCGACCGCCUCCGCGGGGUGGACUGGGCGCCUCUGCUGAGCACCCUCAAGAUCAAUAAAGACCUGCCCUUGGUCUCCAUCAAGAGCUUCUUCCAGCCCUGGCUGGGGGACACAGGUUCUGACAUGAAUAAAUUUUGCAGAAGUCGUGUUCCUGCGAUAAGAUACAAAGAUGUGACCUUCCAGUUGUGUAAAGCUCUUAAAGGCUGUUUAAGUAUAUCAAGUGUGCUAAAGAACCUGGAGCUAAAUGGACUAAUUCUGAGAGAGAGGGAUUUAACUAUUCUAGCAAAGGGAUUGAAUAAAUCGGCUUCUUUGGUGCACCUGUCUCUUGCAAAUUGUCCAAUUGGAGAUGGAGGUUUAGAAAUUAUUUGUCAAGGUAUAAAGAGCUCUAUCACUCUUAAGACAGUCAACUUCACAGGAUGUAAUCUGACAUGGCAGGGAGCAGAUCACAUGGCCAAGAUCUUAAAGUAUCAGACCAUGAGAAGGCAUGAAGAAACCUGGGCUGAGAGUCUUCGCUAUAGGAGACCUGAUCUUGACUGUAUGGCUGGCUUAAGACGUAUCACACUGAAUUGCAACACACUUAUUGGUGACCUAGGUGCAUGUGCUUUUGCAGACUCUCUCAGUGAGGAUUUAUGGCUGAGAGCUCUUGACCUGCAACAGUGCGGCCUCACCAAUGAAGGAGCAAAGGCUUUGCUAGAGGCCCUUGAAACCAAUACAACUCUGGUCGUUCUGGAUAUAAGAAAAAAUCCACUCAUUGAUCAUUCUAUGAUGAAAGCAGUUAUCAAAAAAGUCCUCCAGAAUGGAAGGAGUGCCAAAUCAGAGUACCAGUGGAUAACUUCUCCAUCAGUGAAGGAACCAUCCAAAACUGCUAAACAGAAAAGGAGAACUAUAAUUCUAGGAAGUGGUCACAAAGGAAAAGCUACUAUUAGAAUUGUAAUUUGGAGACACAGAGGAUUGGCUACAAAGAAACCUGUAAGUAGUGGCAGAAAACACUCCCUUGGUAAAGAAUAUUAUGCGCCCGCACCUCUUCCACCUGGUGUGUCUGGUUUCUUGCCGUGGCGUACUGCAGAACGUGCAAAAAGACACAGGGGUUUCCCAUUAAUCAAAACACGUGAUAUAUGUAAUCAGUUGCAGCAACCAGGUUUUCCUGUGACUGUGACAGUAGAGAGUCCUUCAYCCUCUGAAGUUGAAGAGGUUGAUGAUUCUUCAGAGAGUGUUCAUGAAGUGCCUGAGAAAACUAGUAUAGAACAAGAAGCAUUACAGGAAAAACUGGAGGAGUGCCUAAAGCAGUUAAAGGAAGAAAGAGUGAUAAGGCUUAAGGUUGAUAAACGAGUCAGUGAGCUGGAACAUGAAAAUGCCCAGUUAAGAAAUAUAAAUUUCUCUUUGUCUGAAGCCCUUCAUGCACAGUCAUUGACAAAUAUGAUCCUGGAUGAUGAAGGUGUUUUGGGCAGCAUUGAGAAUUCUUUUCAGAAGUUUCAUGCUUUCUUGGAUCUCCUUAAAGAUGCUGGGCUUGGGCAGCUUGCCACAAUGGCUGGGAUAGAUCAGUCAGAUUUUCAAUUACUAGGUCAYCCCCAGAUGACUUCUACUGUUAGUAAUCCACCUAAAGAAGAAAAGAAGGCGCUUGAAGAUGAAAAACCAGAACCGAAGCAGAAUGCCCUAGGGCAAAUGCAAAAUAUCCAGUUUCAGAAAAUUACAGGUGAUGCUAGAAUUCCUUUGCCUCUCGACUCCUUUCCUGUCCCAGUUUCUACUCCAGAGGGCUUAGGAACUUCCAGCAACAACCUAGGAGUCCCAGCUACUGAGCAGCGGCAGGAGUCUUUUGAAGGAUUCAUUGCUAGAAUGUGUUCUCCUUCACCAGAUGCGACUUCUGGAACUGGAAGUCAAAGAAAAGAAGAGGAGUUGUCCAGAAAUAGCAGAUCUUCUUCAGAGAAAAAGACCAAAACAGGUGAAUAUACCAAAAAACACUCUGAUAAGCAACACCCUGGAAAGGm6ACCUGCAUUCCUGAUCUGm6ACUGUCCUGAAAACCAGAAAAGCAAAGAAACUAGGGAAACUAGUUCUUUGGUUAAUGAACCAAUUAAAAGUAGGUCUUUGAAAAAAUACGUUUCUGUCAAGAAAGAAAAUAGAAUAGUGACUGUUUCAYCCAAGACAAAUAAAAGUAAAUCCAGUCCACUAGAm6ACAUUCUGAAAGUGAUACUCUUGGAUGUGAUUUUGAAUUUCAAGAAAGCAUCCAUUCUCUAUCACACCUUUCAUAUGACUAAAUCUUUUGAAACUA
Sequence (MODOMICS CODE ENCODING)	ACCGGCUUGAAUCCCGGCGCCUCAGAGGACUAUGAGGCGGGCGCCAACUGCUUGGGCCGCAGGGCGGGAGGCAGCGCGGGAGUGGGGCGUUGAGGGGCCGGCCUAGCUUGGGGCUCUGGCCUUGCGUCUUCCGACCGAAUCACCGCUCCUGAGCCCGGUGCGGGGCUGCCGCUAUCGCCUGGCCGUGGGUGCCGGAGCGGCCGGGUUGCGACUCAGCGUUCUUGGGUGGGCGCGGGCGGCGUCUCCGCGGCGGGCAUCCCCCGAGGCCGCCCUCGGGCCAUGAUCGACUCCGUGAAGCUGCGCCGCGACAGCGCGGCGGACUUCUUCUCCCACUACGAGUACCUGUGCGCGCUGCAGAACUCGGUGCCGCUGCCCGCCGUGCGCGCCUGUCUCCGGGAGGGCGUGCUGGAUUUCAACGCCGACCGCCUCCGCGGGGUGGACUGGGCGCCUCUGCUGAGCACCCUCAAGAUCAAUAAAGACCUGCCCUUGGUCUCCAUCAAGAGCUUCUUCCAGCCCUGGCUGGGGGACACAGGUUCUGACAUGAAUAAAUUUUGCAGAAGUCGUGUUCCUGCGAUAAGAUACAAAGAUGUGACCUUCCAGUUGUGUAAAGCUCUUAAAGGCUGUUUAAGUAUAUCAAGUGUGCUAAAGAACCUGGAGCUAAAUGGACUAAUUCUGAGAGAGAGGGAUUUAACUAUUCUAGCAAAGGGAUUGAAUAAAUCGGCUUCUUUGGUGCACCUGUCUCUUGCAAAUUGUCCAAUUGGAGAUGGAGGUUUAGAAAUUAUUUGUCAAGGUAUAAAGAGCUCUAUCACUCUUAAGACAGUCAACUUCACAGGAUGUAAUCUGACAUGGCAGGGAGCAGAUCACAUGGCCAAGAUCUUAAAGUAUCAGACCAUGAGAAGGCAUGAAGAAACCUGGGCUGAGAGUCUUCGCUAUAGGAGACCUGAUCUUGACUGUAUGGCUGGCUUAAGACGUAUCACACUGAAUUGCAACACACUUAUUGGUGACCUAGGUGCAUGUGCUUUUGCAGACUCUCUCAGUGAGGAUUUAUGGCUGAGAGCUCUUGACCUGCAACAGUGCGGCCUCACCAAUGAAGGAGCAAAGGCUUUGCUAGAGGCCCUUGAAACCAAUACAACUCUGGUCGUUCUGGAUAUAAGAAAAAAUCCACUCAUUGAUCAUUCUAUGAUGAAAGCAGUUAUCAAAAAAGUCCUCCAGAAUGGAAGGAGUGCCAAAUCAGAGUACCAGUGGAUAACUUCUCCAUCAGUGAAGGAACCAUCCAAAACUGCUAAACAGAAAAGGAGAACUAUAAUUCUAGGAAGUGGUCACAAAGGAAAAGCUACUAUUAGAAUUGUAAUUUGGAGACACAGAGGAUUGGCUACAAAGAAACCUGUAAGUAGUGGCAGAAAACACUCCCUUGGUAAAGAAUAUUAUGCGCCCGCACCUCUUCCACCUGGUGUGUCUGGUUUCUUGCCGUGGCGUACUGCAGAACGUGCAAAAAGACACAGGGGUUUCCCAUUAAUCAAAACACGUGAUAUAUGUAAUCAGUUGCAGCAACCAGGUUUUCCUGUGACUGUGACAGUAGAGAGUCCUUCA2000000009UCCUCUGAAGUUGAAGAGGUUGAUGAUUCUUCAGAGAGUGUUCAUGAAGUGCCUGAGAAAACUAGUAUAGAACAAGAAGCAUUACAGGAAAAACUGGAGGAGUGCCUAAAGCAGUUAAAGGAAGAAAGAGUGAUAAGGCUUAAGGUUGAUAAACGAGUCAGUGAGCUGGAACAUGAAAAUGCCCAGUUAAGAAAUAUAAAUUUCUCUUUGUCUGAAGCCCUUCAUGCACAGUCAUUGACAAAUAUGAUCCUGGAUGAUGAAGGUGUUUUGGGCAGCAUUGAGAAUUCUUUUCAGAAGUUUCAUGCUUUCUUGGAUCUCCUUAAAGAUGCUGGGCUUGGGCAGCUUGCCACAAUGGCUGGGAUAGAUCAGUCAGAUUUUCAAUUACUAGGUCA2000000009UCCCCAGAUGACUUCUACUGUUAGUAAUCCACCUAAAGAAGAAAAGAAGGCGCUUGAAGAUGAAAAACCAGAACCGAAGCAGAAUGCCCUAGGGCAAAUGCAAAAUAUCCAGUUUCAGAAAAUUACAGGUGAUGCUAGAAUUCCUUUGCCUCUCGACUCCUUUCCUGUCCCAGUUUCUACUCCAGAGGGCUUAGGAACUUCCAGCAACAACCUAGGAGUCCCAGCUACUGAGCAGCGGCAGGAGUCUUUUGAAGGAUUCAUUGCUAGAAUGUGUUCUCCUUCACCAGAUGCGACUUCUGGAACUGGAAGUCAAAGAAAAGAAGAGGAGUUGUCCAGAAAUAGCAGAUCUUCUUCAGAGAAAAAGACCAAAACAGGUGAAUAUACCAAAAAACACUCUGAUAAGCAACACCCUGGAAAGG2000000006ACCUGCAUUCCUGAUCUG2000000006ACUGUCCUGAAAACCAGAAAAGCAAAGAAACUAGGGAAACUAGUUCUUUGGUUAAUGAACCAAUUAAAAGUAGGUCUUUGAAAAAAUACGUUUCUGUCAAGAAAGAAAAUAGAAUAGUGACUGUUUCA2000000009UCCAAGACAAAUAAAAGUAAAUCCAGUCCACUAGA2000000006ACAUUCUGAAAGUGAUACUCUUGGAUGUGAUUUUGAAUUUCAAGAAAGCAUCCAUUCUCUAUCACACCUUUCAUAUGACUAAAUCUUUUGAAACUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1591	1983	2402	2420	2548	2583
Modification Positions	Y	Y	m6A	m6A	Y	m6A
Genomic Coordinates	9:78254878:+	9:78265432:+	9:78266749:+	9:78266767:+	9:78266895:+	9:78266930:+
Level of Experimental Evidence	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	3TeAZFYFxgvp 6UuHp6YApVKv gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda	3TeAZFYFxgvp 6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BkoLW2CBToyL BtsJQJ3DteUq dknfVe6BK8aP	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL KENzb7mwdBd9 Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda