General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000376854
Gene ID:	ENSG00000135045
Gene Name:	C9orf40
Sequence (UNICHARACTER ENCODING)	AGAGUGCGCGCGCGCACGUUGUGCGCAGGUUCGAAUCUCCGCCGCUUCGCGGUUGCUUCUCAACGUCCGGGCCGCAUCUCGGCGGCGGCGAGGGCUGAGCGCGGGAGCUGCCUCCGAGCCGGAGCCCCAGCCCUAGGCCCUGCGCGAGCUGCCCCGCCCUACCCCCUCCAGCGUCCUGUCGCCUCCUCGCCCGACUUCGGCCUGUCCCUCUCUCACGCGCUCAGUCCUCGCUCUUCGCCCCCCGCAGCUAUCGGCACUCGGUCUCCCGCGCCUGGCGGGCUCCGCCCGAGCCUCUGGGCCCAUGGCCAAGCGGCGUGCGGCCGAGCCGGUGACGUUCCACGUGCCUUGGAAGCGGCUCCUGCUUUGCGACUUCGCUGAGCAGCCGCCGCCACCGCCUCUCUGGAUCCGGCCGCCCGGGGUCGCGCAUGCUGGGCAGCUCCUCGGCGUCCCAGAGCAGCACCGAAAGCGCAAAAUCGACGCAGGGЖCCAUGGCAGAGCCCUCGGCUUCGCCCAGCAAGCGCCGUGACAGCGGGGACAACAGCGCCCCGAGCGGCCAGGAGCGUGAGGACCACGGUCUGGAGACAGGCGAUCCGCCGCUGCCGCCGCCGCCCGUACUGCCGGGGCCGGGGGAGGAGCUCCCGGGCGCCCGGCUCCCGGGGGGCGGUGGCGACGACGGGGCGGGGCGCGCAGGACCCCCGCGGGGAGACUGGGGGGUCGCAUCGCGCCAGCACAAUGAAGAAUUUUGGCAGUAUAAUACCUUCCAGUACUGGAGGAAUCCUUUGCCUCCUAUUGAUCUGGCAGACAUUGAAGAUUUAAGUGAAGACACCCUGACAGAAGCAACACUUCAGGGCAGGAAUGAAGGGGCUGAGGUUGACAUGGAGUCCUGAUGUAAGGAGCCGAAGCAGUGGGAUUGGCUGAUUUGAGGAGAUGUCUCUAAGUGAAUUCUCGUAUUCUUAAGGGAAAAGUUAUUUUCCAUACUUGAAGUUAUAUUUCCAAACCUGAGAAAUGAAGAAAGAUUGUUCUGACAUUAAAUACCUACAGUUACUACUGAACCUCUUAAUAAGGAUUUGUCAAGGAUAGAGUACAGUUGUAGGGGAAGUAUUUUAUGUAUGCAUUCUUAGAGCAAAAAGUUUUGUUUAAAUUCUAGAAUUGAAGGUACUGAUCUUAUAAAAAGAAAUUCUAGCAGUUUUAGAAAUAGGUGGGAAAAACUCAAAUAUUCCUCCUAUCUGCACCAAAAAGUUUAUUUGUGGUAUAUAAAAUGAAUAUUGUUUUAUAAUЖACUUGUUAAUAAAGUACUUUCUAAUACAUUCUAUUGACUCUGUUAGUUGAACAAAUAGCUGACUUGAACAUCUAUGCAAACUUAAGAUGGGCGGGAUUGUUGUAAAAGCUAUUGUUUUAAAAGAGCUUUCUAAAUGUAAAGUAGUGAUAAUUUCAAUUUGGGUAGCGUGUUUGCAAAGCUUCCAAUAUUUGAUGUUGGUUAAGCUCUACUAUGGGCAACUGAAGAUGGAUAAAGAAAAAUGAAAACUGAAUCGGUGCCUGCUUCCCCCUGUUUUCCCAGGAUUAGAGGAAAAAAUUUAUUGUAUAAUCAGCUUCUUGGUUUUGAAUUGCUUCGAGGCAUGGUUUUAUUCCUUAUUACUPUAGACCUGUAGUUUUCAACACUGACAGCACUPUAAAAAUCUUUGCCUGGGCCUCACUCUUGAGAGAUUCUCAUUUAAUAGUUCUGAGGUGGGUCUUGGAUAUAACUAUUUUUUUAAЖCACCUGUCCUGUUUCCCUCCAUUCCUCUCAUGUGCAGACAGGGUUGAGAACCAGUAGACUAAUGGUCGUUUUUCCUGUUUAAAGGAGAUAACUAAUUUGAGCUGAAGCAAUGCUUCUUAAUUAGCUUUGUUUUUGUUUUGCUCUGUUGGUGGCUUUGUUACAACUGAAUUAUUGUGUUAUUACUAUUUCAUUGUUAAAGAAAUAAAGUAAGCAAUUUGUGAUGUGAGUAUCAGUGAUUAAGUUAACUAACUUUUGUACUGCAPCCAGAAUGUUGGUUUUGCAAUUGAGUAACUGGUUCUUGCUUGCAUUUUUUGUUGUUGAUGACAUUAGAUCCAAAAUUCAAGACAAAUGGUAAAUGCCAUUGAGAGGGAAAGAGAAAAACUUGAUUUUUUUUGUGUAAUGAAGGAUUUAAGAAUGGGUUGACAUUAAUAAGAAUGCUPUAGAЖCAGAAGACAAACUGUAUUGCAUUGUGGUCAGACAUGGUUCAAAGUCUUGUACUGCCACUUCCUACCUAUGUAUCUPUAAGCCAGUUAUUUUUCAUCUCCAAGCCUCAAAUUUCUCACCUGUAAAAUGAGAAAUAAUAAAUAGUAUCUACCUCA
Sequence (SHORT NAMES ENCODING)	AGAGUGCGCGCGCGCACGUUGUGCGCAGGUUCGAAUCUCCGCCGCUUCGCGGUUGCUUCUCAACGUCCGGGCCGCAUCUCGGCGGCGGCGAGGGCUGAGCGCGGGAGCUGCCUCCGAGCCGGAGCCCCAGCCCUAGGCCCUGCGCGAGCUGCCCCGCCCUACCCCCUCCAGCGUCCUGUCGCCUCCUCGCCCGACUUCGGCCUGUCCCUCUCUCACGCGCUCAGUCCUCGCUCUUCGCCCCCCGCAGCUAUCGGCACUCGGUCUCCCGCGCCUGGCGGGCUCCGCCCGAGCCUCUGGGCCCAUGGCCAAGCGGCGUGCGGCCGAGCCGGUGACGUUCCACGUGCCUUGGAAGCGGCUCCUGCUUUGCGACUUCGCUGAGCAGCCGCCGCCACCGCCUCUCUGGAUCCGGCCGCCCGGGGUCGCGCAUGCUGGGCAGCUCCUCGGCGUCCCAGAGCAGCACCGAAAGCGCAAAAUCGACGCAGGGm6ACCAUGGCAGAGCCCUCGGCUUCGCCCAGCAAGCGCCGUGACAGCGGGGACAACAGCGCCCCGAGCGGCCAGGAGCGUGAGGACCACGGUCUGGAGACAGGCGAUCCGCCGCUGCCGCCGCCGCCCGUACUGCCGGGGCCGGGGGAGGAGCUCCCGGGCGCCCGGCUCCCGGGGGGCGGUGGCGACGACGGGGCGGGGCGCGCAGGACCCCCGCGGGGAGACUGGGGGGUCGCAUCGCGCCAGCACAAUGAAGAAUUUUGGCAGUAUAAUACCUUCCAGUACUGGAGGAAUCCUUUGCCUCCUAUUGAUCUGGCAGACAUUGAAGAUUUAAGUGAAGACACCCUGACAGAAGCAACACUUCAGGGCAGGAAUGAAGGGGCUGAGGUUGACAUGGAGUCCUGAUGUAAGGAGCCGAAGCAGUGGGAUUGGCUGAUUUGAGGAGAUGUCUCUAAGUGAAUUCUCGUAUUCUUAAGGGAAAAGUUAUUUUCCAUACUUGAAGUUAUAUUUCCAAACCUGAGAAAUGAAGAAAGAUUGUUCUGACAUUAAAUACCUACAGUUACUACUGAACCUCUUAAUAAGGAUUUGUCAAGGAUAGAGUACAGUUGUAGGGGAAGUAUUUUAUGUAUGCAUUCUUAGAGCAAAAAGUUUUGUUUAAAUUCUAGAAUUGAAGGUACUGAUCUUAUAAAAAGAAAUUCUAGCAGUUUUAGAAAUAGGUGGGAAAAACUCAAAUAUUCCUCCUAUCUGCACCAAAAAGUUUAUUUGUGGUAUAUAAAAUGAAUAUUGUUUUAUAAUm6AACUUGUUAAUAAAGUACUUUCUAAUACAUUCUAUUGACUCUGUUAGUUGAACAAAUAGCUGACUUGAACAUCUAUGCAAACUUAAGAUGGGCGGGAUUGUUGUAAAAGCUAUUGUUUUAAAAGAGCUUUCUAAAUGUAAAGUAGUGAUAAUUUCAAUUUGGGUAGCGUGUUUGCAAAGCUUCCAAUAUUUGAUGUUGGUUAAGCUCUACUAUGGGCAACUGAAGAUGGAUAAAGAAAAAUGAAAACUGAAUCGGUGCCUGCUUCCCCCUGUUUUCCCAGGAUUAGAGGAAAAAAUUUAUUGUAUAAUCAGCUUCUUGGUUUUGAAUUGCUUCGAGGCAUGGUUUUAUUCCUUAUUACUYUAGACCUGUAGUUUUCAACACUGACAGCACUYUAAAAAUCUUUGCCUGGGCCUCACUCUUGAGAGAUUCUCAUUUAAUAGUUCUGAGGUGGGUCUUGGAUAUAACUAUUUUUUUAAm6ACACCUGUCCUGUUUCCCUCCAUUCCUCUCAUGUGCAGACAGGGUUGAGAACCAGUAGACUAAUGGUCGUUUUUCCUGUUUAAAGGAGAUAACUAAUUUGAGCUGAAGCAAUGCUUCUUAAUUAGCUUUGUUUUUGUUUUGCUCUGUUGGUGGCUUUGUUACAACUGAAUUAUUGUGUUAUUACUAUUUCAUUGUUAAAGAAAUAAAGUAAGCAAUUUGUGAUGUGAGUAUCAGUGAUUAAGUUAACUAACUUUUGUACUGCAYCCAGAAUGUUGGUUUUGCAAUUGAGUAACUGGUUCUUGCUUGCAUUUUUUGUUGUUGAUGACAUUAGAUCCAAAAUUCAAGACAAAUGGUAAAUGCCAUUGAGAGGGAAAGAGAAAAACUUGAUUUUUUUUGUGUAAUGAAGGAUUUAAGAAUGGGUUGACAUUAAUAAGAAUGCUYUAGAm6ACAGAAGACAAACUGUAUUGCAUUGUGGUCAGACAUGGUUCAAAGUCUUGUACUGCCACUUCCUACCUAUGUAUCUYUAAGCCAGUUAUUUUUCAUCUCCAAGCCUCAAAUUUCUCACCUGUAAAAUGAGAAAUAAUAAAUAGUAUCUACCUCA
Sequence (MODOMICS CODE ENCODING)	AGAGUGCGCGCGCGCACGUUGUGCGCAGGUUCGAAUCUCCGCCGCUUCGCGGUUGCUUCUCAACGUCCGGGCCGCAUCUCGGCGGCGGCGAGGGCUGAGCGCGGGAGCUGCCUCCGAGCCGGAGCCCCAGCCCUAGGCCCUGCGCGAGCUGCCCCGCCCUACCCCCUCCAGCGUCCUGUCGCCUCCUCGCCCGACUUCGGCCUGUCCCUCUCUCACGCGCUCAGUCCUCGCUCUUCGCCCCCCGCAGCUAUCGGCACUCGGUCUCCCGCGCCUGGCGGGCUCCGCCCGAGCCUCUGGGCCCAUGGCCAAGCGGCGUGCGGCCGAGCCGGUGACGUUCCACGUGCCUUGGAAGCGGCUCCUGCUUUGCGACUUCGCUGAGCAGCCGCCGCCACCGCCUCUCUGGAUCCGGCCGCCCGGGGUCGCGCAUGCUGGGCAGCUCCUCGGCGUCCCAGAGCAGCACCGAAAGCGCAAAAUCGACGCAGGG2000000006ACCAUGGCAGAGCCCUCGGCUUCGCCCAGCAAGCGCCGUGACAGCGGGGACAACAGCGCCCCGAGCGGCCAGGAGCGUGAGGACCACGGUCUGGAGACAGGCGAUCCGCCGCUGCCGCCGCCGCCCGUACUGCCGGGGCCGGGGGAGGAGCUCCCGGGCGCCCGGCUCCCGGGGGGCGGUGGCGACGACGGGGCGGGGCGCGCAGGACCCCCGCGGGGAGACUGGGGGGUCGCAUCGCGCCAGCACAAUGAAGAAUUUUGGCAGUAUAAUACCUUCCAGUACUGGAGGAAUCCUUUGCCUCCUAUUGAUCUGGCAGACAUUGAAGAUUUAAGUGAAGACACCCUGACAGAAGCAACACUUCAGGGCAGGAAUGAAGGGGCUGAGGUUGACAUGGAGUCCUGAUGUAAGGAGCCGAAGCAGUGGGAUUGGCUGAUUUGAGGAGAUGUCUCUAAGUGAAUUCUCGUAUUCUUAAGGGAAAAGUUAUUUUCCAUACUUGAAGUUAUAUUUCCAAACCUGAGAAAUGAAGAAAGAUUGUUCUGACAUUAAAUACCUACAGUUACUACUGAACCUCUUAAUAAGGAUUUGUCAAGGAUAGAGUACAGUUGUAGGGGAAGUAUUUUAUGUAUGCAUUCUUAGAGCAAAAAGUUUUGUUUAAAUUCUAGAAUUGAAGGUACUGAUCUUAUAAAAAGAAAUUCUAGCAGUUUUAGAAAUAGGUGGGAAAAACUCAAAUAUUCCUCCUAUCUGCACCAAAAAGUUUAUUUGUGGUAUAUAAAAUGAAUAUUGUUUUAUAAU2000000006AACUUGUUAAUAAAGUACUUUCUAAUACAUUCUAUUGACUCUGUUAGUUGAACAAAUAGCUGACUUGAACAUCUAUGCAAACUUAAGAUGGGCGGGAUUGUUGUAAAAGCUAUUGUUUUAAAAGAGCUUUCUAAAUGUAAAGUAGUGAUAAUUUCAAUUUGGGUAGCGUGUUUGCAAAGCUUCCAAUAUUUGAUGUUGGUUAAGCUCUACUAUGGGCAACUGAAGAUGGAUAAAGAAAAAUGAAAACUGAAUCGGUGCCUGCUUCCCCCUGUUUUCCCAGGAUUAGAGGAAAAAAUUUAUUGUAUAAUCAGCUUCUUGGUUUUGAAUUGCUUCGAGGCAUGGUUUUAUUCCUUAUUACU2000000009UUAGACCUGUAGUUUUCAACACUGACAGCACU2000000009UUAAAAAUCUUUGCCUGGGCCUCACUCUUGAGAGAUUCUCAUUUAAUAGUUCUGAGGUGGGUCUUGGAUAUAACUAUUUUUUUAA2000000006ACACCUGUCCUGUUUCCCUCCAUUCCUCUCAUGUGCAGACAGGGUUGAGAACCAGUAGACUAAUGGUCGUUUUUCCUGUUUAAAGGAGAUAACUAAUUUGAGCUGAAGCAAUGCUUCUUAAUUAGCUUUGUUUUUGUUUUGCUCUGUUGGUGGCUUUGUUACAACUGAAUUAUUGUGUUAUUACUAUUUCAUUGUUAAAGAAAUAAAGUAAGCAAUUUGUGAUGUGAGUAUCAGUGAUUAAGUUAACUAACUUUUGUACUGCA2000000009UCCAGAAUGUUGGUUUUGCAAUUGAGUAACUGGUUCUUGCUUGCAUUUUUUGUUGUUGAUGACAUUAGAUCCAAAAUUCAAGACAAAUGGUAAAUGCCAUUGAGAGGGAAAGAGAAAAACUUGAUUUUUUUUGUGUAAUGAAGGAUUUAAGAAUGGGUUGACAUUAAUAAGAAUGCU2000000009UUAGA2000000006ACAGAAGACAAACUGUAUUGCAUUGUGGUCAGACAUGGUUCAAAGUCUUGUACUGCCACUUCCUACCUAUGUAUCU2000000009UUAAGCCAGUUAUUUUUCAUCUCCAAGCCUCAAAUUUCUCACCUGUAAAAUGAGAAAUAAUAAAUAGUAUCUACCUCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	485	1277	1636	1668	1753	2016	2193	2198	2274
Modification Positions	m6A	m6A	Y	Y	m6A	Y	Y	m6A	Y
Genomic Coordinates	9:74952428:-	9:74947657:-	9:74947298:-	9:74947266:-	9:74947181:-	9:74946918:-	9:74946741:-	9:74946736:-	9:74946660:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn ArijeGVTwYBw BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 ZuM5xpZmNuDL	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8