General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000358022
Gene ID:	ENSG00000198680
Gene Name:	TUSC1
Sequence (UNICHARACTER ENCODING)	AGCAGCCGCCGCCCGCGACCUCCUCUCCUCCUCCGUCGUCACCCCGGCCGCCCUGCCAGCCCCGAACUUGCCCGCGCCUGGCCGCGCGGCCCCUCAGCCCACGGGGCUGGCGGCGCGGUUGGGAUGGGACCGAUGUGGCGCAUGCGUGGUGGCGCCACUAGGCGCGGGAGUUGCUGCGGCGGGGACGGUGCUGCGGACGGCCGAGGGCCAGGCCGCUCCGGCCGGGCUCGUGGUGGGGGCAGCCCCAGCGGCGGCGGCGGCGGCGUGGGCUGGCGAGGCCGCGCGGACGGCGCCCGACAGCAGCUGGAGGAGCGGUUUGCCGACCUGGCGGCGAGCCACUUGGAGGCCAPCCGUGCGCGGGACGAGUGGGACCGGCAGAACGCGCGGCUGCGUCAGGAGAACGCCCGGCUGCGGCUCGAGAACCGGCGGCUGAAGCGCGAGAACCGCAGCCUCUUCCGUCAGGCUUUGCGGCUCCCCGGCGAAGGCGGCAACGGGACGCCCGCGGAGGCACGCCGGGUCCCUGAAGAGGCCAGCACGAACCGGAGGGCUAGAGЖCAGCGGCCGAGAGGACGAGCCGGGCAGCCCCAGGGCCCUGAGGGCCCGACUUGAGAAGCUGGAAGCCAUGUACCGCCGGGCCCUGCUGCAGCUGCACCUCGAGCAGCGGGGACCACGUCCGAGCGGGGACAAGGAGGAGCAGCCUCUACAGGAACCCGACUCCGGCCUCCGCUCCCGGGЖCUCGGAGCCCUCUGGGCCCUGGCUGUAGCCGAGGCCGCAGCCGGUGAGAGGCGGAGCCUCGAGCGGGCCCCUCCUCCPCCGUUCCCAGCUACCCCCGACCUCGCGCACGCCCUGGCCCGCUCCCUGCCCGCGGAUACCUUGGЖCUACGGUGCCUUCCCGCCCCCACCAGUGGЖCACUUCCGGGUGGCGCUUGGCCAPCCGCUUGGUGGAGGUCGAGUGGGUGCAAGGGCCCUCAGGЖCCUCCCACAUGUЖCЖGUUCCCCUGCCUCUUGCCCCGGCUAGUUUCCCUGGAGAGAGGCCUAGCCAACAACGAAGGGЖCGGAUUUUAAAACAGCGAGAЖCUGGGUGCCAAGAAACACUUCAUAUUCCCUGAЖCUUUUCUGGAUGUUGUGCGAACCUGUUGUAUUUUUUUUUUUCCUGUAUUUUGGUUCUGAGGGAUGAGUAAUGUGUUUUUAGUUGGUUGAGUUUAUCCAUUCUUCAAUCCCCUAAAGCCUUCAGCUAUUCUUUCAUAUGUGGCCAACAUUUUAAGUACAGUGUUUGCUUUUAUAAGUCGGUGUUACUUGGAUGUCCUAUAAAAUACCCACUUUUUAUAAAGAUGAUAUUUAUAACCUAGGAACUCAUGCCUGUCUUGGCUGCAGUCCCUGUACAUCUAAUAUAUACUGAUUUGUUUGCCCCCAGAGAAUUUUUAAGGUAUCUGCCUAUAUCGUGAUCUUUUGAAAUGGUAAAUAAAUCUGGUGCAUUAAAAAUUA
Sequence (SHORT NAMES ENCODING)	AGCAGCCGCCGCCCGCGACCUCCUCUCCUCCUCCGUCGUCACCCCGGCCGCCCUGCCAGCCCCGAACUUGCCCGCGCCUGGCCGCGCGGCCCCUCAGCCCACGGGGCUGGCGGCGCGGUUGGGAUGGGACCGAUGUGGCGCAUGCGUGGUGGCGCCACUAGGCGCGGGAGUUGCUGCGGCGGGGACGGUGCUGCGGACGGCCGAGGGCCAGGCCGCUCCGGCCGGGCUCGUGGUGGGGGCAGCCCCAGCGGCGGCGGCGGCGGCGUGGGCUGGCGAGGCCGCGCGGACGGCGCCCGACAGCAGCUGGAGGAGCGGUUUGCCGACCUGGCGGCGAGCCACUUGGAGGCCAYCCGUGCGCGGGACGAGUGGGACCGGCAGAACGCGCGGCUGCGUCAGGAGAACGCCCGGCUGCGGCUCGAGAACCGGCGGCUGAAGCGCGAGAACCGCAGCCUCUUCCGUCAGGCUUUGCGGCUCCCCGGCGAAGGCGGCAACGGGACGCCCGCGGAGGCACGCCGGGUCCCUGAAGAGGCCAGCACGAACCGGAGGGCUAGAGm6ACAGCGGCCGAGAGGACGAGCCGGGCAGCCCCAGGGCCCUGAGGGCCCGACUUGAGAAGCUGGAAGCCAUGUACCGCCGGGCCCUGCUGCAGCUGCACCUCGAGCAGCGGGGACCACGUCCGAGCGGGGACAAGGAGGAGCAGCCUCUACAGGAACCCGACUCCGGCCUCCGCUCCCGGGm6ACUCGGAGCCCUCUGGGCCCUGGCUGUAGCCGAGGCCGCAGCCGGUGAGAGGCGGAGCCUCGAGCGGGCCCCUCCUCCYCCGUUCCCAGCUACCCCCGACCUCGCGCACGCCCUGGCCCGCUCCCUGCCCGCGGAUACCUUGGm6ACUACGGUGCCUUCCCGCCCCCACCAGUGGm6ACACUUCCGGGUGGCGCUUGGCCAYCCGCUUGGUGGAGGUCGAGUGGGUGCAAGGGCCCUCAGGm6ACCUCCCACAUGUm6ACm6AGUUCCCCUGCCUCUUGCCCCGGCUAGUUUCCCUGGAGAGAGGCCUAGCCAACAACGAAGGGm6ACGGAUUUUAAAACAGCGAGAm6ACUGGGUGCCAAGAAACACUUCAUAUUCCCUGAm6ACUUUUCUGGAUGUUGUGCGAACCUGUUGUAUUUUUUUUUUUCCUGUAUUUUGGUUCUGAGGGAUGAGUAAUGUGUUUUUAGUUGGUUGAGUUUAUCCAUUCUUCAAUCCCCUAAAGCCUUCAGCUAUUCUUUCAUAUGUGGCCAACAUUUUAAGUACAGUGUUUGCUUUUAUAAGUCGGUGUUACUUGGAUGUCCUAUAAAAUACCCACUUUUUAUAAAGAUGAUAUUUAUAACCUAGGAACUCAUGCCUGUCUUGGCUGCAGUCCCUGUACAUCUAAUAUAUACUGAUUUGUUUGCCCCCAGAGAAUUUUUAAGGUAUCUGCCUAUAUCGUGAUCUUUUGAAAUGGUAAAUAAAUCUGGUGCAUUAAAAAUUA
Sequence (MODOMICS CODE ENCODING)	AGCAGCCGCCGCCCGCGACCUCCUCUCCUCCUCCGUCGUCACCCCGGCCGCCCUGCCAGCCCCGAACUUGCCCGCGCCUGGCCGCGCGGCCCCUCAGCCCACGGGGCUGGCGGCGCGGUUGGGAUGGGACCGAUGUGGCGCAUGCGUGGUGGCGCCACUAGGCGCGGGAGUUGCUGCGGCGGGGACGGUGCUGCGGACGGCCGAGGGCCAGGCCGCUCCGGCCGGGCUCGUGGUGGGGGCAGCCCCAGCGGCGGCGGCGGCGGCGUGGGCUGGCGAGGCCGCGCGGACGGCGCCCGACAGCAGCUGGAGGAGCGGUUUGCCGACCUGGCGGCGAGCCACUUGGAGGCCA2000000009UCCGUGCGCGGGACGAGUGGGACCGGCAGAACGCGCGGCUGCGUCAGGAGAACGCCCGGCUGCGGCUCGAGAACCGGCGGCUGAAGCGCGAGAACCGCAGCCUCUUCCGUCAGGCUUUGCGGCUCCCCGGCGAAGGCGGCAACGGGACGCCCGCGGAGGCACGCCGGGUCCCUGAAGAGGCCAGCACGAACCGGAGGGCUAGAG2000000006ACAGCGGCCGAGAGGACGAGCCGGGCAGCCCCAGGGCCCUGAGGGCCCGACUUGAGAAGCUGGAAGCCAUGUACCGCCGGGCCCUGCUGCAGCUGCACCUCGAGCAGCGGGGACCACGUCCGAGCGGGGACAAGGAGGAGCAGCCUCUACAGGAACCCGACUCCGGCCUCCGCUCCCGGG2000000006ACUCGGAGCCCUCUGGGCCCUGGCUGUAGCCGAGGCCGCAGCCGGUGAGAGGCGGAGCCUCGAGCGGGCCCCUCCUCC2000000009UCCGUUCCCAGCUACCCCCGACCUCGCGCACGCCCUGGCCCGCUCCCUGCCCGCGGAUACCUUGG2000000006ACUACGGUGCCUUCCCGCCCCCACCAGUGG2000000006ACACUUCCGGGUGGCGCUUGGCCA2000000009UCCGCUUGGUGGAGGUCGAGUGGGUGCAAGGGCCCUCAGG2000000006ACCUCCCACAUGU2000000006AC2000000006AGUUCCCCUGCCUCUUGCCCCGGCUAGUUUCCCUGGAGAGAGGCCUAGCCAACAACGAAGGG2000000006ACGGAUUUUAAAACAGCGAGA2000000006ACUGGGUGCCAAGAAACACUUCAUAUUCCCUGA2000000006ACUUUUCUGGAUGUUGUGCGAACCUGUUGUAUUUUUUUUUUUCCUGUAUUUUGGUUCUGAGGGAUGAGUAAUGUGUUUUUAGUUGGUUGAGUUUAUCCAUUCUUCAAUCCCCUAAAGCCUUCAGCUAUUCUUUCAUAUGUGGCCAACAUUUUAAGUACAGUGUUUGCUUUUAUAAGUCGGUGUUACUUGGAUGUCCUAUAAAAUACCCACUUUUUAUAAAGAUGAUAUUUAUAACCUAGGAACUCAUGCCUGUCUUGGCUGCAGUCCCUGUACAUCUAAUAUAUACUGAUUUGUUUGCCCCCAGAGAAUUUUUAAGGUAUCUGCCUAUAUCGUGAUCUUUUGAAAUGGUAAAUAAAUCUGGUGCAUUAAAAAUUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	350	554	734	812	877	907	931	971	984	986	1048	1069	1102
Modification Positions	Y	m6A	m6A	Y	m6A	m6A	Y	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	9:25678095:-	9:25677891:-	9:25677711:-	9:25677633:-	9:25677568:-	9:25677538:-	9:25677514:-	9:25677474:-	9:25677461:-	9:25677459:-	9:25677397:-	9:25677376:-	9:25677343:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	6AyXsheySjfx Ap2q43bQLNek msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 93arJtwJmuS9 Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 93arJtwJmuS9 KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G	3kRDPWwiRCgi L6w2k2VEv4EY	3TeAZFYFxgvp 6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8