Modomics - A Database of RNA Modifications

General Data

RNA Type mRNA
Original Source Sci-ModoM
Transcript ID: ENST00000371899
Gene ID: ENSG00000160326
Gene Name: SLC2A6
Sequence (UNICHARACTER ENCODING) AGUCUGAGCGCCCUCCGCUCGCCCCGAGAGAGACCCGGCCAUGCAGGAGCCGCUGCUGGGAGCCGAGGGCCCGGACUACGACACCUUCCCCGAGAAGCCGCCCCCGUCGCCAGGGGACAGGGCGCGGGUCGGGACCCUGCAGAACAAAAGGGUGUUCCUGGCCACCUUCGCCGCAGUGCUCGGCAAUUUCAGCUUUGGGUAUGCCCUGGUCUACACAUCCCCUGUCAUCCCAGCCCUGGAGCGCUCCUUGGAUCCUGACCUGCAUCUGACCAAAUCCCAGGCAUCCUGGUUUGGGUCCGUGUUCACCCUGGGAGCAGCGGCCGGAGGCCUGAGUGCCAUGAUCCUCAACGACCUCCUGGGCCGGAAGCUGAGCAUCAUGUUCUCAGCUGUGCCGUCGGCGGCCGGCUAUGCGCUCAUGGCGGGUGCGCACGGCCUCUGGAUGCUGCUGCUCGGAAGGACGCUGACGGGCUUCGCCGGGGGGCUCACAGCUGCCUGCAUCCCGGUGUACGUGUCUGAGAUUGCUCCCCCAGGCGUUCGUGGGGCUCUGGGGGCCACACCCCAGCUCAUGGCAGUGUUCGGAUCCCUGUCCCUCUACGCCCUUGGCCUCCUGCUGCCGUGGCGCUGGCUGGCUGUGGCCGGGGAGGCGCCUGUGCUCAUCAUGAUCCUGCUGCUCAGCUUCAUGCCCAACUCGCCGCGCUUCCUGCUCUCUCGGGGCAGGGACGAAGAGGCCCUGCGGGCGCUGGCCUGGCUGCGUGGGACGGACGUCGAUGUCCACUGGGAGUUCGAGCAGAUCCAGGACAACGUCCGGAGACAGAGCAGCCGAGUAUCGUGGGCUGAGGCACGGGCCCCACACGUGUGCCGGCCCAUCACCGUGGCCUUGCUGAUGCGCCUCCUGCAGCAGCUGACGGGCAUCACGCCCAUCCUGGUCUACCUGCAGUCCAUCUUCGACAGCACCGCUGUCCUGCUGCCCCCCAAGGACGACGCAGCCAUCGUUGGGGCCGUGCGGCUCCUGUCCGUGCUGAUCGCCGCCCUCACCAUGGACCUCGCAGGCCGCAAGGUGCUGCUCUUCGUCUCAGCGGCCAUCAUGUUUGCUGCCAACCUGACUCUGGGGCUGUACAUCCACUUUGGCCCCAGGCCUCUGAGCCCCAACAGCACUGCGGGCCUGGAAAGCGAGUCCUGGGGGGACUUGGCGCAGCCCCUGGCAGCACCCGCUGGCUACCUCACCCUGGUGCCCCUGCUGGCCACCAUGCUCUUCAUCAUGGGCUACGCCGUGGGCUGGGGUCCCAUCACCUGGCUGCUCAUGUCUGAGGUCCUGCCCCUGCGUGCCCGUGGCGUGGCCUCAGGGCUCUGCGUGCUGGCCAGCUGGCUCACCGCCUUCGUCCUCACCAAGUCCUUCCUGCCAGUGGUGAGCACCUUCGGCCUCCAGGUGCCUUUCUUCUUCUUCGCGGCCAUCUGCUUGGUGAGCCUGGUGUUCACAGGCUGCUGUGUGCCCGAGЖCCAAGGGЖCGGUCCCUGGAGCAGAUCGAGUCCUUCUUCCGCACGGGGAGAAGGUCCUUCUUGCGCUAGGUCAAGGUCCCCGCCUGGAGGGGGCCAAACCCCCAGUGGCUGGGCCUCUGUGUUGGCUACAAACCUGCACCCUGGGЖCCAAGAGGCAGCAGUCAUCCCUGCCACCAGCCAGAGCACAGGAAGAGCAGUGUGAUGGGGCCUCAGCAGCGGGUGCCCCUGGCUCGGGЖCAGGUAGCACUGCUGUCCAGCCACAGCCCCAGCCCAGGCAGCCCACAGUGCUGCACGUAGCCAUGGGCCGCAGGAGUGCAUACAACCCUGCAUCCAGGGЖCACGGCCCUGCUGGGUGACCUCAGGCCUAGUCCCUUUCCCUUGCGUGAAGGЖCACGCCCCACAGAAGGCUACGGGGAGGЖCUGAGAGGACAGGGCUGGAGGCAGCCAAGUAACGUAGUCAUAUCAUCGCGCUCUGAUCUGGUGGCAUCUGGCUGUGCAAGGAAGACCCGGCUUUGCCCUCACAAGUCUUAUGGGCACCACAGGGAACAUCCUGGЖCUUAAAAAGCCAGGGCAGGCCGGGCACAGUGGCUCACGCCUGUAAUCCCAGCACUUUGGGAGGCCAAAGCAGGUGGAUUACCCAAGGCCAGGAGUUCAAGACCAGCCUGGCCAACAUGGUGAAACCCCGUCUCUACUAAAAAAUACAAAAAAGCUGGGUGUGGUGGCACACACCCGUAGUUCCAGCUACUUGGGAGGCUGAGGCAGCAUUGCUUGAACCCGGGAGGUGGAGGCUGCAAUGAGCUGAGAUCAUGCCAUUGCACUCCAGCCUGGGCAACGAGAGUGAAACUCCGUCCCCACCCCCUGCCAAAAAAAAAAAAAAAAAAGCCAGGGCAAAGGACCUGGCGUGGCCACUUCCPCCUGCCCCAGCCCAACCUCUGGGAACAGGCAGCUCCUAUCUGCAAACUGUGUUCACCCUUUUGUAAAAAUAAAGGAACUGGACCUGUA
Sequence (SHORT NAMES ENCODING) AGUCUGAGCGCCCUCCGCUCGCCCCGAGAGAGACCCGGCCAUGCAGGAGCCGCUGCUGGGAGCCGAGGGCCCGGACUACGACACCUUCCCCGAGAAGCCGCCCCCGUCGCCAGGGGACAGGGCGCGGGUCGGGACCCUGCAGAACAAAAGGGUGUUCCUGGCCACCUUCGCCGCAGUGCUCGGCAAUUUCAGCUUUGGGUAUGCCCUGGUCUACACAUCCCCUGUCAUCCCAGCCCUGGAGCGCUCCUUGGAUCCUGACCUGCAUCUGACCAAAUCCCAGGCAUCCUGGUUUGGGUCCGUGUUCACCCUGGGAGCAGCGGCCGGAGGCCUGAGUGCCAUGAUCCUCAACGACCUCCUGGGCCGGAAGCUGAGCAUCAUGUUCUCAGCUGUGCCGUCGGCGGCCGGCUAUGCGCUCAUGGCGGGUGCGCACGGCCUCUGGAUGCUGCUGCUCGGAAGGACGCUGACGGGCUUCGCCGGGGGGCUCACAGCUGCCUGCAUCCCGGUGUACGUGUCUGAGAUUGCUCCCCCAGGCGUUCGUGGGGCUCUGGGGGCCACACCCCAGCUCAUGGCAGUGUUCGGAUCCCUGUCCCUCUACGCCCUUGGCCUCCUGCUGCCGUGGCGCUGGCUGGCUGUGGCCGGGGAGGCGCCUGUGCUCAUCAUGAUCCUGCUGCUCAGCUUCAUGCCCAACUCGCCGCGCUUCCUGCUCUCUCGGGGCAGGGACGAAGAGGCCCUGCGGGCGCUGGCCUGGCUGCGUGGGACGGACGUCGAUGUCCACUGGGAGUUCGAGCAGAUCCAGGACAACGUCCGGAGACAGAGCAGCCGAGUAUCGUGGGCUGAGGCACGGGCCCCACACGUGUGCCGGCCCAUCACCGUGGCCUUGCUGAUGCGCCUCCUGCAGCAGCUGACGGGCAUCACGCCCAUCCUGGUCUACCUGCAGUCCAUCUUCGACAGCACCGCUGUCCUGCUGCCCCCCAAGGACGACGCAGCCAUCGUUGGGGCCGUGCGGCUCCUGUCCGUGCUGAUCGCCGCCCUCACCAUGGACCUCGCAGGCCGCAAGGUGCUGCUCUUCGUCUCAGCGGCCAUCAUGUUUGCUGCCAACCUGACUCUGGGGCUGUACAUCCACUUUGGCCCCAGGCCUCUGAGCCCCAACAGCACUGCGGGCCUGGAAAGCGAGUCCUGGGGGGACUUGGCGCAGCCCCUGGCAGCACCCGCUGGCUACCUCACCCUGGUGCCCCUGCUGGCCACCAUGCUCUUCAUCAUGGGCUACGCCGUGGGCUGGGGUCCCAUCACCUGGCUGCUCAUGUCUGAGGUCCUGCCCCUGCGUGCCCGUGGCGUGGCCUCAGGGCUCUGCGUGCUGGCCAGCUGGCUCACCGCCUUCGUCCUCACCAAGUCCUUCCUGCCAGUGGUGAGCACCUUCGGCCUCCAGGUGCCUUUCUUCUUCUUCGCGGCCAUCUGCUUGGUGAGCCUGGUGUUCACAGGCUGCUGUGUGCCCGAGm6ACCAAGGGm6ACGGUCCCUGGAGCAGAUCGAGUCCUUCUUCCGCACGGGGAGAAGGUCCUUCUUGCGCUAGGUCAAGGUCCCCGCCUGGAGGGGGCCAAACCCCCAGUGGCUGGGCCUCUGUGUUGGCUACAAACCUGCACCCUGGGm6ACCAAGAGGCAGCAGUCAUCCCUGCCACCAGCCAGAGCACAGGAAGAGCAGUGUGAUGGGGCCUCAGCAGCGGGUGCCCCUGGCUCGGGm6ACAGGUAGCACUGCUGUCCAGCCACAGCCCCAGCCCAGGCAGCCCACAGUGCUGCACGUAGCCAUGGGCCGCAGGAGUGCAUACAACCCUGCAUCCAGGGm6ACACGGCCCUGCUGGGUGACCUCAGGCCUAGUCCCUUUCCCUUGCGUGAAGGm6ACACGCCCCACAGAAGGCUACGGGGAGGm6ACUGAGAGGACAGGGCUGGAGGCAGCCAAGUAACGUAGUCAUAUCAUCGCGCUCUGAUCUGGUGGCAUCUGGCUGUGCAAGGAAGACCCGGCUUUGCCCUCACAAGUCUUAUGGGCACCACAGGGAACAUCCUGGm6ACUUAAAAAGCCAGGGCAGGCCGGGCACAGUGGCUCACGCCUGUAAUCCCAGCACUUUGGGAGGCCAAAGCAGGUGGAUUACCCAAGGCCAGGAGUUCAAGACCAGCCUGGCCAACAUGGUGAAACCCCGUCUCUACUAAAAAAUACAAAAAAGCUGGGUGUGGUGGCACACACCCGUAGUUCCAGCUACUUGGGAGGCUGAGGCAGCAUUGCUUGAACCCGGGAGGUGGAGGCUGCAAUGAGCUGAGAUCAUGCCAUUGCACUCCAGCCUGGGCAACGAGAGUGAAACUCCGUCCCCACCCCCUGCCAAAAAAAAAAAAAAAAAAGCCAGGGCAAAGGACCUGGCGUGGCCACUUCCYCCUGCCCCAGCCCAACCUCUGGGAACAGGCAGCUCCUAUCUGCAAACUGUGUUCACCCUUUUGUAAAAAUAAAGGAACUGGACCUGUA
Sequence (MODOMICS CODE ENCODING) AGUCUGAGCGCCCUCCGCUCGCCCCGAGAGAGACCCGGCCAUGCAGGAGCCGCUGCUGGGAGCCGAGGGCCCGGACUACGACACCUUCCCCGAGAAGCCGCCCCCGUCGCCAGGGGACAGGGCGCGGGUCGGGACCCUGCAGAACAAAAGGGUGUUCCUGGCCACCUUCGCCGCAGUGCUCGGCAAUUUCAGCUUUGGGUAUGCCCUGGUCUACACAUCCCCUGUCAUCCCAGCCCUGGAGCGCUCCUUGGAUCCUGACCUGCAUCUGACCAAAUCCCAGGCAUCCUGGUUUGGGUCCGUGUUCACCCUGGGAGCAGCGGCCGGAGGCCUGAGUGCCAUGAUCCUCAACGACCUCCUGGGCCGGAAGCUGAGCAUCAUGUUCUCAGCUGUGCCGUCGGCGGCCGGCUAUGCGCUCAUGGCGGGUGCGCACGGCCUCUGGAUGCUGCUGCUCGGAAGGACGCUGACGGGCUUCGCCGGGGGGCUCACAGCUGCCUGCAUCCCGGUGUACGUGUCUGAGAUUGCUCCCCCAGGCGUUCGUGGGGCUCUGGGGGCCACACCCCAGCUCAUGGCAGUGUUCGGAUCCCUGUCCCUCUACGCCCUUGGCCUCCUGCUGCCGUGGCGCUGGCUGGCUGUGGCCGGGGAGGCGCCUGUGCUCAUCAUGAUCCUGCUGCUCAGCUUCAUGCCCAACUCGCCGCGCUUCCUGCUCUCUCGGGGCAGGGACGAAGAGGCCCUGCGGGCGCUGGCCUGGCUGCGUGGGACGGACGUCGAUGUCCACUGGGAGUUCGAGCAGAUCCAGGACAACGUCCGGAGACAGAGCAGCCGAGUAUCGUGGGCUGAGGCACGGGCCCCACACGUGUGCCGGCCCAUCACCGUGGCCUUGCUGAUGCGCCUCCUGCAGCAGCUGACGGGCAUCACGCCCAUCCUGGUCUACCUGCAGUCCAUCUUCGACAGCACCGCUGUCCUGCUGCCCCCCAAGGACGACGCAGCCAUCGUUGGGGCCGUGCGGCUCCUGUCCGUGCUGAUCGCCGCCCUCACCAUGGACCUCGCAGGCCGCAAGGUGCUGCUCUUCGUCUCAGCGGCCAUCAUGUUUGCUGCCAACCUGACUCUGGGGCUGUACAUCCACUUUGGCCCCAGGCCUCUGAGCCCCAACAGCACUGCGGGCCUGGAAAGCGAGUCCUGGGGGGACUUGGCGCAGCCCCUGGCAGCACCCGCUGGCUACCUCACCCUGGUGCCCCUGCUGGCCACCAUGCUCUUCAUCAUGGGCUACGCCGUGGGCUGGGGUCCCAUCACCUGGCUGCUCAUGUCUGAGGUCCUGCCCCUGCGUGCCCGUGGCGUGGCCUCAGGGCUCUGCGUGCUGGCCAGCUGGCUCACCGCCUUCGUCCUCACCAAGUCCUUCCUGCCAGUGGUGAGCACCUUCGGCCUCCAGGUGCCUUUCUUCUUCUUCGCGGCCAUCUGCUUGGUGAGCCUGGUGUUCACAGGCUGCUGUGUGCCCGAG2000000006ACCAAGGG2000000006ACGGUCCCUGGAGCAGAUCGAGUCCUUCUUCCGCACGGGGAGAAGGUCCUUCUUGCGCUAGGUCAAGGUCCCCGCCUGGAGGGGGCCAAACCCCCAGUGGCUGGGCCUCUGUGUUGGCUACAAACCUGCACCCUGGG2000000006ACCAAGAGGCAGCAGUCAUCCCUGCCACCAGCCAGAGCACAGGAAGAGCAGUGUGAUGGGGCCUCAGCAGCGGGUGCCCCUGGCUCGGG2000000006ACAGGUAGCACUGCUGUCCAGCCACAGCCCCAGCCCAGGCAGCCCACAGUGCUGCACGUAGCCAUGGGCCGCAGGAGUGCAUACAACCCUGCAUCCAGGG2000000006ACACGGCCCUGCUGGGUGACCUCAGGCCUAGUCCCUUUCCCUUGCGUGAAGG2000000006ACACGCCCCACAGAAGGCUACGGGGAGG2000000006ACUGAGAGGACAGGGCUGGAGGCAGCCAAGUAACGUAGUCAUAUCAUCGCGCUCUGAUCUGGUGGCAUCUGGCUGUGCAAGGAAGACCCGGCUUUGCCCUCACAAGUCUUAUGGGCACCACAGGGAACAUCCUGG2000000006ACUUAAAAAGCCAGGGCAGGCCGGGCACAGUGGCUCACGCCUGUAAUCCCAGCACUUUGGGAGGCCAAAGCAGGUGGAUUACCCAAGGCCAGGAGUUCAAGACCAGCCUGGCCAACAUGGUGAAACCCCGUCUCUACUAAAAAAUACAAAAAAGCUGGGUGUGGUGGCACACACCCGUAGUUCCAGCUACUUGGGAGGCUGAGGCAGCAUUGCUUGAACCCGGGAGGUGGAGGCUGCAAUGAGCUGAGAUCAUGCCAUUGCACUCCAGCCUGGGCAACGAGAGUGAAACUCCGUCCCCACCCCCUGCCAAAAAAAAAAAAAAAAAAGCCAGGGCAAAGGACCUGGCGUGGCCACUUCC2000000009UCCUGCCCCAGCCCAACCUCUGGGAACAGGCAGCUCCUAUCUGCAAACUGUGUUCACCCUUUUGUAAAAAUAAAGGAACUGGACCUGUA

Score Table

Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.
Method Classification Score
Multiple direct experimental evidence 1
Direct experimental evidence 2
Inferred based on indirect experimental evidence 3
Predicted computationally 4
Evidence not yet annotated (Unknown) 5
Irrelevant 6

Modification Positions

Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.

Position in the Sequence 1496 1504 1641 1730 1830 1882 1910 2045 2403
Modification Positions m6A m6A m6A m6A m6A m6A m6A m6A Y
Genomic Coordinates 9:133472089:- 9:133472081:- 9:133471944:- 9:133471855:- 9:133471755:- 9:133471703:- 9:133471675:- 9:133471540:- 9:133471182:-
Level of Experimental Evidence 3 3 3 3 3 3 3 3 3
Level of Experimental Reliability 3 3 3 3 3 3 3 3 3
Source Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM
EUFIDs ArijeGVTwYBw
Yfn77uLS5tv8
3TeAZFYFxgvp
6AyXsheySjfx
Ap2q43bQLNek
gBgcfFQ5WN9C
gZuvgwMuBfgh
Mg9GixDBFQAT
msuJfBpJvM5H
nGifePrmgHfe
NjZ8bGGJsNSR
Q36pf44ZRvxu
QmcpiJ88DBDn
QpiKdbVikVz2
UN3tNpbCPHYf
V5PvfiKsgFMd
VyCX26p5UBRL
Lny8GcCeVGc9
PF5iqBNSbHaa
UKen6WEino9G
3TeAZFYFxgvp
5Nnepx5V7yHo
6AyXsheySjfx
Ap2q43bQLNek
gZuvgwMuBfgh
msuJfBpJvM5H
nGifePrmgHfe
NjZ8bGGJsNSR
Q36pf44ZRvxu
QmcpiJ88DBDn
QpiKdbVikVz2
UN3tNpbCPHYf
V5PvfiKsgFMd
VyCX26p5UBRL
Yfn77uLS5tv8
3TeAZFYFxgvp
5Nnepx5V7yHo
6AyXsheySjfx
aHkqKEJkRYyb
aivdrAsbdKEU
Ap2q43bQLNek
gBgcfFQ5WN9C
gZuvgwMuBfgh
Mg9GixDBFQAT
msuJfBpJvM5H
nGifePrmgHfe
NjZ8bGGJsNSR
Q36pf44ZRvxu
QmcpiJ88DBDn
QpiKdbVikVz2
UN3tNpbCPHYf
V5PvfiKsgFMd
VyCX26p5UBRL
Yfn77uLS5tv8
3TeAZFYFxgvp
5Nnepx5V7yHo
6AyXsheySjfx
aHkqKEJkRYyb
Ap2q43bQLNek
gBgcfFQ5WN9C
gZuvgwMuBfgh
Mg9GixDBFQAT
msuJfBpJvM5H
nGifePrmgHfe
NjZ8bGGJsNSR
Q36pf44ZRvxu
QmcpiJ88DBDn
QpiKdbVikVz2
UN3tNpbCPHYf
V5PvfiKsgFMd
VyCX26p5UBRL
Yfn77uLS5tv8
3TeAZFYFxgvp
5Nnepx5V7yHo
6AyXsheySjfx
aHkqKEJkRYyb
Ap2q43bQLNek
gBgcfFQ5WN9C
Mg9GixDBFQAT
msuJfBpJvM5H
nGifePrmgHfe
NjZ8bGGJsNSR
Q36pf44ZRvxu
QmcpiJ88DBDn
QpiKdbVikVz2
UN3tNpbCPHYf
V5PvfiKsgFMd
VyCX26p5UBRL
Yfn77uLS5tv8
5Nnepx5V7yHo
msuJfBpJvM5H
aJksAshEgQ8U
Yfn77uLS5tv8
5Nnepx5V7yHo
aHkqKEJkRYyb
msuJfBpJvM5H
nGifePrmgHfe
NjZ8bGGJsNSR
Q36pf44ZRvxu
QmcpiJ88DBDn
QpiKdbVikVz2
UN3tNpbCPHYf
VyCX26p5UBRL
93arJtwJmuS9
Lny8GcCeVGc9
Yfn77uLS5tv8
BtsJQJ3DteUq
JkWoGWVwjNda
Yfn77uLS5tv8