General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000421582
Gene ID:	ENSG00000159884
Gene Name:	CCDC107
Sequence (UNICHARACTER ENCODING)	CGGCCGGCCAAUGCCGGACCGCUUCGGCACCGCCCGCCCGAUCCCUCCACCCGUGGGCCGGCAAUGGCGGGCGCAGUUUCGCUCUUGGGUGUGGUGGGGCUGCUGCUUGUGUCUGCGCUGUCCGGGGUCCUAGGAGACCGCGCCAAUCCCGACCUCCGGGCACACCCAGGGAACGCAGCCCACCCCGGCUCUGGAGCCACGGAACCCCGGCGGCGACCACCGCUCAAGGAUCAACGCGAGCGGACCCGGGCCGGGUCGCUGCCUCUGGGGGCGCUGUACACCGCGGCCGUCGCGGCUUUUGUGCUGUACAAGUGUUUGCAGGGGAAAGAUGAAACUGCGGUUCUCCACGAGGAGGCAAGCAAGCAGCAGCCACUGCAGUCAGGUGGGUUUAGCAGAAGUCUGUGCUGGGUCGGGGGAGUUUAGGGGACAGCAGAAGAUACAUAACCACUUCUGCCCCCUUUUUUCCCUUAUCCCCAGAGCAACAGCUGGCCCAGUUGACACAACAGCUGGCCCAGACAGAGCAGCACCUGAACAACCUGAUGGCCCAGCUGGACCCCCUUUUUGAGCGGUGAGGAGAGCAAUGAUUCUGUGAAUUUUUGGGGAAUUUGUGGCAGGAGGGAGGAAUGGGGACAUAGGUUGGGAGCCACUGAGUGGЖCAUUUCUUCAGUGUGACUACUCUGGCUGGAGCCCAGCAGGAGCUUCUGAACAUGAAGCUAUGGACCAPCCACGAGCUGCUGCAAGAUAGCAAGCCGGACAAGGAUAUGGAGGCUUCAGAACCAGGUGAAGGCUCGGGAGGCGAGUCUGCUGGAGGUGGAGACAAAGUCUCUGAAACUGGAЖCAUUCCUGAUCUCUCCCCACACAGAGGCCAGCAGЖCCUCUUCCUGAGGЖCUUCUGUUUAAAGGAGGACGAGGAGGAGAUUGGUGACAGUCAGGCCUGGGAGGAGCCCACAAЖCUGGAGCACAGAGЖCAUGGAЖCCUAGCUACUUCCUGGGAGGUGGGGCGGGGACUACGGAGAAGGUGCAGCCAGGCUGUGGCAAAGGGCCCCAGUCACAGCCUUGGCUGGGAAGGAGGGACGACAGCUGAAGGUCGACUAAAACAAAGUCUGUUUUCAUGAUGGAGUGCUCCUGUGUGUUUUUUCGAUCCUAGUUGGUUGUACACACCCAUACUAGGUGCCUAAGGЖCAACUGGGCCUUCUUGAAGAGCUGUCCUUAUUAGGACAAAAAGAGGCUGCCUUCCAGUGUGACAGCAGAGAAGAUAGAGGGAGCUCCAGCUCUUUUCCUCGUAUUCCUGAGGCCACCAGCAUGCCCGCGUUCAGGGCCCAAAAAUCCCUU
Sequence (SHORT NAMES ENCODING)	CGGCCGGCCAAUGCCGGACCGCUUCGGCACCGCCCGCCCGAUCCCUCCACCCGUGGGCCGGCAAUGGCGGGCGCAGUUUCGCUCUUGGGUGUGGUGGGGCUGCUGCUUGUGUCUGCGCUGUCCGGGGUCCUAGGAGACCGCGCCAAUCCCGACCUCCGGGCACACCCAGGGAACGCAGCCCACCCCGGCUCUGGAGCCACGGAACCCCGGCGGCGACCACCGCUCAAGGAUCAACGCGAGCGGACCCGGGCCGGGUCGCUGCCUCUGGGGGCGCUGUACACCGCGGCCGUCGCGGCUUUUGUGCUGUACAAGUGUUUGCAGGGGAAAGAUGAAACUGCGGUUCUCCACGAGGAGGCAAGCAAGCAGCAGCCACUGCAGUCAGGUGGGUUUAGCAGAAGUCUGUGCUGGGUCGGGGGAGUUUAGGGGACAGCAGAAGAUACAUAACCACUUCUGCCCCCUUUUUUCCCUUAUCCCCAGAGCAACAGCUGGCCCAGUUGACACAACAGCUGGCCCAGACAGAGCAGCACCUGAACAACCUGAUGGCCCAGCUGGACCCCCUUUUUGAGCGGUGAGGAGAGCAAUGAUUCUGUGAAUUUUUGGGGAAUUUGUGGCAGGAGGGAGGAAUGGGGACAUAGGUUGGGAGCCACUGAGUGGm6ACAUUUCUUCAGUGUGACUACUCUGGCUGGAGCCCAGCAGGAGCUUCUGAACAUGAAGCUAUGGACCAYCCACGAGCUGCUGCAAGAUAGCAAGCCGGACAAGGAUAUGGAGGCUUCAGAACCAGGUGAAGGCUCGGGAGGCGAGUCUGCUGGAGGUGGAGACAAAGUCUCUGAAACUGGAm6ACAUUCCUGAUCUCUCCCCACACAGAGGCCAGCAGm6ACCUCUUCCUGAGGm6ACUUCUGUUUAAAGGAGGACGAGGAGGAGAUUGGUGACAGUCAGGCCUGGGAGGAGCCCACAAm6ACUGGAGCACAGAGm6ACAUGGAm6ACCUAGCUACUUCCUGGGAGGUGGGGCGGGGACUACGGAGAAGGUGCAGCCAGGCUGUGGCAAAGGGCCCCAGUCACAGCCUUGGCUGGGAAGGAGGGACGACAGCUGAAGGUCGACUAAAACAAAGUCUGUUUUCAUGAUGGAGUGCUCCUGUGUGUUUUUUCGAUCCUAGUUGGUUGUACACACCCAUACUAGGUGCCUAAGGm6ACAACUGGGCCUUCUUGAAGAGCUGUCCUUAUUAGGACAAAAAGAGGCUGCCUUCCAGUGUGACAGCAGAGAAGAUAGAGGGAGCUCCAGCUCUUUUCCUCGUAUUCCUGAGGCCACCAGCAUGCCCGCGUUCAGGGCCCAAAAAUCCCUU
Sequence (MODOMICS CODE ENCODING)	CGGCCGGCCAAUGCCGGACCGCUUCGGCACCGCCCGCCCGAUCCCUCCACCCGUGGGCCGGCAAUGGCGGGCGCAGUUUCGCUCUUGGGUGUGGUGGGGCUGCUGCUUGUGUCUGCGCUGUCCGGGGUCCUAGGAGACCGCGCCAAUCCCGACCUCCGGGCACACCCAGGGAACGCAGCCCACCCCGGCUCUGGAGCCACGGAACCCCGGCGGCGACCACCGCUCAAGGAUCAACGCGAGCGGACCCGGGCCGGGUCGCUGCCUCUGGGGGCGCUGUACACCGCGGCCGUCGCGGCUUUUGUGCUGUACAAGUGUUUGCAGGGGAAAGAUGAAACUGCGGUUCUCCACGAGGAGGCAAGCAAGCAGCAGCCACUGCAGUCAGGUGGGUUUAGCAGAAGUCUGUGCUGGGUCGGGGGAGUUUAGGGGACAGCAGAAGAUACAUAACCACUUCUGCCCCCUUUUUUCCCUUAUCCCCAGAGCAACAGCUGGCCCAGUUGACACAACAGCUGGCCCAGACAGAGCAGCACCUGAACAACCUGAUGGCCCAGCUGGACCCCCUUUUUGAGCGGUGAGGAGAGCAAUGAUUCUGUGAAUUUUUGGGGAAUUUGUGGCAGGAGGGAGGAAUGGGGACAUAGGUUGGGAGCCACUGAGUGG2000000006ACAUUUCUUCAGUGUGACUACUCUGGCUGGAGCCCAGCAGGAGCUUCUGAACAUGAAGCUAUGGACCA2000000009UCCACGAGCUGCUGCAAGAUAGCAAGCCGGACAAGGAUAUGGAGGCUUCAGAACCAGGUGAAGGCUCGGGAGGCGAGUCUGCUGGAGGUGGAGACAAAGUCUCUGAAACUGGA2000000006ACAUUCCUGAUCUCUCCCCACACAGAGGCCAGCAG2000000006ACCUCUUCCUGAGG2000000006ACUUCUGUUUAAAGGAGGACGAGGAGGAGAUUGGUGACAGUCAGGCCUGGGAGGAGCCCACAA2000000006ACUGGAGCACAGAG2000000006ACAUGGA2000000006ACCUAGCUACUUCCUGGGAGGUGGGGCGGGGACUACGGAGAAGGUGCAGCCAGGCUGUGGCAAAGGGCCCCAGUCACAGCCUUGGCUGGGAAGGAGGGACGACAGCUGAAGGUCGACUAAAACAAAGUCUGUUUUCAUGAUGGAGUGCUCCUGUGUGUUUUUUCGAUCCUAGUUGGUUGUACACACCCAUACUAGGUGCCUAAGG2000000006ACAACUGGGCCUUCUUGAAGAGCUGUCCUUAUUAGGACAAAAAGAGGCUGCCUUCCAGUGUGACAGCAGAGAAGAUAGAGGGAGCUCCAGCUCUUUUCCUCGUAUUCCUGAGGCCACCAGCAUGCCCGCGUUCAGGGCCCAAAAAUCCCUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	655	723	836	871	885	948	962	969	1174
Modification Positions	m6A	Y	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	9:35660734:+	9:35660802:+	9:35660915:+	9:35660950:+	9:35660964:+	9:35661027:+	9:35661041:+	9:35661048:+	9:35661253:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu VL7zkHvkfkoB VyCX26p5UBRL Lny8GcCeVGc9 UKen6WEino9G	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 nfCHyrYzE6fB Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn L6w2k2VEv4EY Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	6UuHp6YApVKv jNkxUQNx8GRd