General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000609948
Gene ID:	ENSG00000167113
Gene Name:	COQ4
Sequence (UNICHARACTER ENCODING)	CGGCUGUGGAGAAGGAAAUAGGGCCCGGCGCUGAGUGAGCGUGGUUGCGUGUCCUUUGCAGACACUUUCUGGGGCGAGGUGACAUGGCGAGAGUCUUGGAUCGGUGGACGUAGACGGUAGACAGUUCGCGUGCGUUUCCUUCGCCUACUUGGCCUACAUGCCUUCUGCCCGUGAAGCGAUGUUUCCCCUCGAAAGGCCGUAGGCUACGCCGUCAGAAUCGGUUUUUCAGUGAGUUUUGACCCCUCCGACGCUCCGUCGCCUGACAGAAUCGCGGCGUUCUUCGUACCCGCCCAPCCUCCGCGGACGCCCGCUGCCAUGGCGACUCUGCUGCGCCCUGUCCPCCGUCGGCUCUGCGGGCUCCCGGGCCUACAGCGGCCUGCGGCAGAAAUGCCCCPCCGGGCUAGGAGCGACGGCGCCGGCCCGCUAUACUCGCACCACCUCCCCACCUCCCCGCUGCAGAAAG#GCUGUUGGCCGCCGGCUCCGCGGCGAUGGCGCUCUAUAACCCCUACCGCCACGGUAAGGCCGCCCGCGCCUCGCCCCCGUGGGGGCGGCUUGGAGCCGUUUCCUGUGGGUAACUGGAЖCAUAGCCUAGGUCGGGGUACCCAAACCUGGUUGCAGCUCGUAACCACUCGGAЖCGUUUAUGAAAAUGCAGAUUCCUGGAUCCCACCUAAACGCЖCUGAAUCUGAAUCUGAAUCUGCAGUGGAGGGAGAAAUGGGCGUGAAACCGAAAGUCUGUCUPUAAACUACUUGGGAGAAUCUGUCAUGCAGCCAUAUUGAGAACAUCUAGACUAAAUAGAUGAUUCAUAAGUACCGAUCAGUUUAUAAUAUCCUACUAGAAAGUCAACUCCGAGGUCGAGGACCAUGUCUGCCUCGUUCCACUGCAUCUGCAGCCUUCUGGAUAGUGCCUGGCACAUAGUAAAUGCUCAAUAAAUGUUUGCUGGAUGUGUGACUAGAACA
Sequence (SHORT NAMES ENCODING)	CGGCUGUGGAGAAGGAAAUAGGGCCCGGCGCUGAGUGAGCGUGGUUGCGUGUCCUUUGCAGACACUUUCUGGGGCGAGGUGACAUGGCGAGAGUCUUGGAUCGGUGGACGUAGACGGUAGACAGUUCGCGUGCGUUUCCUUCGCCUACUUGGCCUACAUGCCUUCUGCCCGUGAAGCGAUGUUUCCCCUCGAAAGGCCGUAGGCUACGCCGUCAGAAUCGGUUUUUCAGUGAGUUUUGACCCCUCCGACGCUCCGUCGCCUGACAGAAUCGCGGCGUUCUUCGUACCCGCCCAYCCUCCGCGGACGCCCGCUGCCAUGGCGACUCUGCUGCGCCCUGUCCYCCGUCGGCUCUGCGGGCUCCCGGGCCUACAGCGGCCUGCGGCAGAAAUGCCCCYCCGGGCUAGGAGCGACGGCGCCGGCCCGCUAUACUCGCACCACCUCCCCACCUCCCCGCUGCAGAAAGGmGCUGUUGGCCGCCGGCUCCGCGGCGAUGGCGCUCUAUAACCCCUACCGCCACGGUAAGGCCGCCCGCGCCUCGCCCCCGUGGGGGCGGCUUGGAGCCGUUUCCUGUGGGUAACUGGAm6ACAUAGCCUAGGUCGGGGUACCCAAACCUGGUUGCAGCUCGUAACCACUCGGAm6ACGUUUAUGAAAAUGCAGAUUCCUGGAUCCCACCUAAACGCm6ACUGAAUCUGAAUCUGAAUCUGCAGUGGAGGGAGAAAUGGGCGUGAAACCGAAAGUCUGUCUYUAAACUACUUGGGAGAAUCUGUCAUGCAGCCAUAUUGAGAACAUCUAGACUAAAUAGAUGAUUCAUAAGUACCGAUCAGUUUAUAAUAUCCUACUAGAAAGUCAACUCCGAGGUCGAGGACCAUGUCUGCCUCGUUCCACUGCAUCUGCAGCCUUCUGGAUAGUGCCUGGCACAUAGUAAAUGCUCAAUAAAUGUUUGCUGGAUGUGUGACUAGAACA
Sequence (MODOMICS CODE ENCODING)	CGGCUGUGGAGAAGGAAAUAGGGCCCGGCGCUGAGUGAGCGUGGUUGCGUGUCCUUUGCAGACACUUUCUGGGGCGAGGUGACAUGGCGAGAGUCUUGGAUCGGUGGACGUAGACGGUAGACAGUUCGCGUGCGUUUCCUUCGCCUACUUGGCCUACAUGCCUUCUGCCCGUGAAGCGAUGUUUCCCCUCGAAAGGCCGUAGGCUACGCCGUCAGAAUCGGUUUUUCAGUGAGUUUUGACCCCUCCGACGCUCCGUCGCCUGACAGAAUCGCGGCGUUCUUCGUACCCGCCCA2000000009UCCUCCGCGGACGCCCGCUGCCAUGGCGACUCUGCUGCGCCCUGUCC2000000009UCCGUCGGCUCUGCGGGCUCCCGGGCCUACAGCGGCCUGCGGCAGAAAUGCCCC2000000009UCCGGGCUAGGAGCGACGGCGCCGGCCCGCUAUACUCGCACCACCUCCCCACCUCCCCGCUGCAGAAAG2000000090GGCUGUUGGCCGCCGGCUCCGCGGCGAUGGCGCUCUAUAACCCCUACCGCCACGGUAAGGCCGCCCGCGCCUCGCCCCCGUGGGGGCGGCUUGGAGCCGUUUCCUGUGGGUAACUGGA2000000006ACAUAGCCUAGGUCGGGGUACCCAAACCUGGUUGCAGCUCGUAACCACUCGGA2000000006ACGUUUAUGAAAAUGCAGAUUCCUGGAUCCCACCUAAACGC2000000006ACUGAAUCUGAAUCUGAAUCUGCAGUGGAGGGAGAAAUGGGCGUGAAACCGAAAGUCUGUCU2000000009UUAAACUACUUGGGAGAAUCUGUCAUGCAGCCAUAUUGAGAACAUCUAGACUAAAUAGAUGAUUCAUAAGUACCGAUCAGUUUAUAAUAUCCUACUAGAAAGUCAACUCCGAGGUCGAGGACCAUGUCUGCCUCGUUCCACUGCAUCUGCAGCCUUCUGGAUAGUGCCUGGCACAUAGUAAAUGCUCAAUAAAUGUUUGCUGGAUGUGUGACUAGAACA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	294	341	395	464	582	635	676	738
Modification Positions	Y	Y	Y	Gm	m6A	m6A	m6A	Y
Genomic Coordinates	9:128322837:+	9:128322884:+	9:128323025:+	9:128323094:+	9:128323212:+	9:128323265:+	9:128323306:+	9:128323368:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	jaSvBXBkn3xs YkSG92k4EHDM	3TeAZFYFxgvp 6UuHp6YApVKv gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6UuHp6YApVKv gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML	3TeAZFYFxgvp 6UuHp6YApVKv gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8