General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000394060
Gene ID:	ENSG00000119487
Gene Name:	MAPKAP1
Sequence (UNICHARACTER ENCODING)	GGAACGCCGGGGUGUGGUUCCGGGUCGUGUGCGGCUCGGGGUAAUAGGGCUGCUGCUCGGCCGGCCGGCGGCGGCGAGCAGCAGGGGCAUGAGGGCUAACCCGGGAAGCGGCAGCUGAGCGGGCCGGGAGGAGCGCCGGUCCCCGUGGAUCCCGAGAGUGCAGAGCUCGGGGCAGGGGCCGGGAGGCGUGGGGGAGCCGGGCCCUCCCCUCAGGAACGUGUCCCGGGGCCGACCCGGCCCGUAGUGUGGAAGCAGCUUCAGGUAGGUGAGCUCGUGAAACAAUAUGAAGAGGAGAAAAUAGCCUUUUAAGGAAAUUGGCCCACAGAAAGGAUGGCCUUCUUGGЖCAAUCCAACUAUCAUUCUAGCUCAUAUUCGACAGUCACAUGUGACCAGUGAUGACACGGGAAUGUGUGAGAUGGUUCUCAUUGAUCAUGAUGUUGACCUAGAGAAGAUUCAPCCUCCUUCAAUGCCUGGAGACAGUGGGUCAGAAAUUCAGGGAAGCAAUGGUGAGACUCAGGGCUAUGUAUAUGCCCAGUCAGUCGAUAUUACCUCAAGUUGGGACUUUGGUAUUAGAAGACGCUCAAACACAGCUCAAAGAUUAGAACGACUCCGAAAAGAGAGACAAAACCAGAUCAAAUGCAAAAAUAUUCAGUGGAAAGAAAGAAAUUCUAAGCAAUCAGCCCAGGAGUUAAAGUCACUGUUUGAAAAAAAAUCUCUCAAAGAGAAGCCUCCAAUUUCUGGGAAGCAGUCGAUAUUAUCUGUACGCCUAGAЖCAGUGCCCUCUGCAGCUGAAUAACCCUUUUAACGAGUAUUCCAAAUUUGAUGGCAAGGGUCAUGUAGGUACAACAGCAACCAAGAAGAUCGAUGUCUACCUCCCUCUGCACUCGAGCCAGGACAGACUGCUGCCAAUGACCGUGGUGACAAUGGCCAGCGCCAGGGUGCAGGACCUGAUCGGGCUCAUCUGCUGGCAGUAUACAAGCGAAGGACGGGAGCCGAAGCUCAAUGACAAUGUCAGUGCCUACUGCCUGCAUAUUGCUGAGGAUGAUGGGGAGGUGGACACCGAUUUCCCCCCGCUGGAUUCCAAUGAGCCCAUUCAPAAGUUUGGCUUCAGUACUUUGGCCCUGGUUGAAAAGUACUCAUCUCCUGGUCUGACAPCCAAAGAGUCACUCUUUGUUCGAAUAAAUGCUGCUCAUGGAUUCUCCCUUAUUCAGGUGGЖCAACACAAAGGUUACCAUGAAGGAAAUCUUACUGAAGGCAGUGAAGCGAAGAAAAGGAUCCCAGAAAGUUUCAGGUGCUUGUGACUAAAUUCACUAAUUUCACUGGCUGUCAAGGCUGUGUUAAGGAAAAUGGGUUUGAЖCUGCUGUGGGUUUUGAGUACUGGЖCUGGAUGUCAGAAACCUUUGCCAUCACGGGAAAUUCUGUCACUCUGGAUUUACUGUCUGUUCCCCACAGCUAAAUUCCUCUGCAGUGUGAUUUAGCACCCUGGAUCCCCAUCAACCAGUUUUGGCAUUUAUUUGAAUGCAUUACCCCACUGGUUUCCAUAAACUAUUUUACAAUUGUUUAAAAUAAAUGACUGUUUAUUUCCACAAAA
Sequence (SHORT NAMES ENCODING)	GGAACGCCGGGGUGUGGUUCCGGGUCGUGUGCGGCUCGGGGUAAUAGGGCUGCUGCUCGGCCGGCCGGCGGCGGCGAGCAGCAGGGGCAUGAGGGCUAACCCGGGAAGCGGCAGCUGAGCGGGCCGGGAGGAGCGCCGGUCCCCGUGGAUCCCGAGAGUGCAGAGCUCGGGGCAGGGGCCGGGAGGCGUGGGGGAGCCGGGCCCUCCCCUCAGGAACGUGUCCCGGGGCCGACCCGGCCCGUAGUGUGGAAGCAGCUUCAGGUAGGUGAGCUCGUGAAACAAUAUGAAGAGGAGAAAAUAGCCUUUUAAGGAAAUUGGCCCACAGAAAGGAUGGCCUUCUUGGm6ACAAUCCAACUAUCAUUCUAGCUCAUAUUCGACAGUCACAUGUGACCAGUGAUGACACGGGAAUGUGUGAGAUGGUUCUCAUUGAUCAUGAUGUUGACCUAGAGAAGAUUCAYCCUCCUUCAAUGCCUGGAGACAGUGGGUCAGAAAUUCAGGGAAGCAAUGGUGAGACUCAGGGCUAUGUAUAUGCCCAGUCAGUCGAUAUUACCUCAAGUUGGGACUUUGGUAUUAGAAGACGCUCAAACACAGCUCAAAGAUUAGAACGACUCCGAAAAGAGAGACAAAACCAGAUCAAAUGCAAAAAUAUUCAGUGGAAAGAAAGAAAUUCUAAGCAAUCAGCCCAGGAGUUAAAGUCACUGUUUGAAAAAAAAUCUCUCAAAGAGAAGCCUCCAAUUUCUGGGAAGCAGUCGAUAUUAUCUGUACGCCUAGAm6ACAGUGCCCUCUGCAGCUGAAUAACCCUUUUAACGAGUAUUCCAAAUUUGAUGGCAAGGGUCAUGUAGGUACAACAGCAACCAAGAAGAUCGAUGUCUACCUCCCUCUGCACUCGAGCCAGGACAGACUGCUGCCAAUGACCGUGGUGACAAUGGCCAGCGCCAGGGUGCAGGACCUGAUCGGGCUCAUCUGCUGGCAGUAUACAAGCGAAGGACGGGAGCCGAAGCUCAAUGACAAUGUCAGUGCCUACUGCCUGCAUAUUGCUGAGGAUGAUGGGGAGGUGGACACCGAUUUCCCCCCGCUGGAUUCCAAUGAGCCCAUUCAYAAGUUUGGCUUCAGUACUUUGGCCCUGGUUGAAAAGUACUCAUCUCCUGGUCUGACAYCCAAAGAGUCACUCUUUGUUCGAAUAAAUGCUGCUCAUGGAUUCUCCCUUAUUCAGGUGGm6ACAACACAAAGGUUACCAUGAAGGAAAUCUUACUGAAGGCAGUGAAGCGAAGAAAAGGAUCCCAGAAAGUUUCAGGUGCUUGUGACUAAAUUCACUAAUUUCACUGGCUGUCAAGGCUGUGUUAAGGAAAAUGGGUUUGAm6ACUGCUGUGGGUUUUGAGUACUGGm6ACUGGAUGUCAGAAACCUUUGCCAUCACGGGAAAUUCUGUCACUCUGGAUUUACUGUCUGUUCCCCACAGCUAAAUUCCUCUGCAGUGUGAUUUAGCACCCUGGAUCCCCAUCAACCAGUUUUGGCAUUUAUUUGAAUGCAUUACCCCACUGGUUUCCAUAAACUAUUUUACAAUUGUUUAAAAUAAAUGACUGUUUAUUUCCACAAAA
Sequence (MODOMICS CODE ENCODING)	GGAACGCCGGGGUGUGGUUCCGGGUCGUGUGCGGCUCGGGGUAAUAGGGCUGCUGCUCGGCCGGCCGGCGGCGGCGAGCAGCAGGGGCAUGAGGGCUAACCCGGGAAGCGGCAGCUGAGCGGGCCGGGAGGAGCGCCGGUCCCCGUGGAUCCCGAGAGUGCAGAGCUCGGGGCAGGGGCCGGGAGGCGUGGGGGAGCCGGGCCCUCCCCUCAGGAACGUGUCCCGGGGCCGACCCGGCCCGUAGUGUGGAAGCAGCUUCAGGUAGGUGAGCUCGUGAAACAAUAUGAAGAGGAGAAAAUAGCCUUUUAAGGAAAUUGGCCCACAGAAAGGAUGGCCUUCUUGG2000000006ACAAUCCAACUAUCAUUCUAGCUCAUAUUCGACAGUCACAUGUGACCAGUGAUGACACGGGAAUGUGUGAGAUGGUUCUCAUUGAUCAUGAUGUUGACCUAGAGAAGAUUCA2000000009UCCUCCUUCAAUGCCUGGAGACAGUGGGUCAGAAAUUCAGGGAAGCAAUGGUGAGACUCAGGGCUAUGUAUAUGCCCAGUCAGUCGAUAUUACCUCAAGUUGGGACUUUGGUAUUAGAAGACGCUCAAACACAGCUCAAAGAUUAGAACGACUCCGAAAAGAGAGACAAAACCAGAUCAAAUGCAAAAAUAUUCAGUGGAAAGAAAGAAAUUCUAAGCAAUCAGCCCAGGAGUUAAAGUCACUGUUUGAAAAAAAAUCUCUCAAAGAGAAGCCUCCAAUUUCUGGGAAGCAGUCGAUAUUAUCUGUACGCCUAGA2000000006ACAGUGCCCUCUGCAGCUGAAUAACCCUUUUAACGAGUAUUCCAAAUUUGAUGGCAAGGGUCAUGUAGGUACAACAGCAACCAAGAAGAUCGAUGUCUACCUCCCUCUGCACUCGAGCCAGGACAGACUGCUGCCAAUGACCGUGGUGACAAUGGCCAGCGCCAGGGUGCAGGACCUGAUCGGGCUCAUCUGCUGGCAGUAUACAAGCGAAGGACGGGAGCCGAAGCUCAAUGACAAUGUCAGUGCCUACUGCCUGCAUAUUGCUGAGGAUGAUGGGGAGGUGGACACCGAUUUCCCCCCGCUGGAUUCCAAUGAGCCCAUUCA2000000009UAAGUUUGGCUUCAGUACUUUGGCCCUGGUUGAAAAGUACUCAUCUCCUGGUCUGACA2000000009UCCAAAGAGUCACUCUUUGUUCGAAUAAAUGCUGCUCAUGGAUUCUCCCUUAUUCAGGUGG2000000006ACAACACAAAGGUUACCAUGAAGGAAAUCUUACUGAAGGCAGUGAAGCGAAGAAAAGGAUCCCAGAAAGUUUCAGGUGCUUGUGACUAAAUUCACUAAUUUCACUGGCUGUCAAGGCUGUGUUAAGGAAAAUGGGUUUGA2000000006ACUGCUGUGGGUUUUGAGUACUGG2000000006ACUGGAUGUCAGAAACCUUUGCCAUCACGGGAAAUUCUGUCACUCUGGAUUUACUGUCUGUUCCCCACAGCUAAAUUCCUCUGCAGUGUGAUUUAGCACCCUGGAUCCCCAUCAACCAGUUUUGGCAUUUAUUUGAAUGCAUUACCCCACUGGUUUCCAUAAACUAUUUUACAAUUGUUUAAAAUAAAUGACUGUUUAUUUCCACAAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	344	456	771	1095	1153	1214	1354	1378
Modification Positions	m6A	Y	m6A	Y	Y	m6A	m6A	m6A
Genomic Coordinates	9:125672561:-	9:125672449:-	9:125657708:-	9:125559716:-	9:125559658:-	9:125543133:-	9:125521700:-	9:125521676:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	8cMbzB4aD5Se ArijeGVTwYBw BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL Lny8GcCeVGc9	Ap2q43bQLNek gZuvgwMuBfgh msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 Lny8GcCeVGc9