General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000691551
Gene ID:	ENSG00000136861
Gene Name:	CDK5RAP2
Sequence (UNICHARACTER ENCODING)	GGAGUUGCUGCAGGCCAGUGAUGUGGAUUACUGUGUGGCCGAGGGUUUCCAGGAACAGCUGAAUCAAUGUGCUGAGCUGCUGGAGAAAUUGGAAAAGCUAUUUCUCAACGGUAGGUAGGGUGAGGAAAAUCAGUUGGAGUGGAAAUGAACACCCAGAAUGAACUGAUGGAGAGGAUUGAGGAAGACAACUUAACCUACCAACAUCUUCUGCCUGAAUCUCCUGAGCCUUCAGCCUCUCAUGCGCUCUCUGAUUAUGAAACAUCUGAAAAGUCCUUCUUCUCACGAGACCAGAAGCAAGAUAAUGAGACAGAGAAGACUUCAGUUAUGGUGAACAGUUUUUCUCAAGACUUACUAAUGGAACACAUACAGGAAAUUCGAACUUUGAGAAAGCGUUUAGAAGAAUCUAUUAAAACAAAUGAGAAGCUACGGAAACAGUUGGAACGGCAAGGAUCUGAAUUUGUUCAAGGUUCUACAAGCAUUUUUGCUUCUGGUUCAGAGCUUCAUAGUUCUCUAACAUCAGAAAUUCAUUUCUUGAGGAAGCAGAACCAGGCCCUCAAUGCAAUGCUCAUUAAAGGAUCCAGAGAUAAACAGAAGGAGAAUGACAAAUUACGAGAGUCCCUCUCCAGGAAGACCGUGAGCCUGGAGCACCUUCAGCGGGAGUAUGCCAGCGUGAAGGAAGAAAAUGAAAGGCUGCAGAAAGAAGGCAGCGAGAAGGAGAGACACAACCAGCAGCUGAUCCAGGAGGUCCGCUGCAGCGGCCAGGAGCUGAGCAGGGUGCAGGAGGAGGUGAAGUUGAGGCAGCAGCUGCUCUCACAGAAUGACAAGCUAUUGCAGUCUCUCCGAGUGGAGCUGAAGGCGUAUGAGAAGCUGGAUGAAGAGCACAGGAGACUGAGAGAGGCGUCGGGAGAAGGCUGGAAGGGGCAGGAUCCUUUCAGGGACCUGCACAGCCUCCUGAUGGAGAUCCAGGCUCUGCGCUUGCAACUAGAAAGGAGCAUCGAAACCAGCAGCACUCUGCAGAGCAGGCUCAAGGAACAGCUGGCAAGGGGGGCAGAGAAGGCACAGGAAGGAGCCCUCACUCUGGCUGUCCAAGCCGUGUCCAUCCCUGAGGUGCCCCUUCAGCCUGACAAACACGAUGGUGACAAAUAUCCCAUGGAAAGUGAUAAUUCAUUUGAUCUGUUUGAUUCCUCCCAGGCAGUGACACCAAAAUCAGUUUCAGAGACUCCUCCACUCUCUGGGAAUGACACGGACUCCCUCUCCUGCGACAGUGGCAGUUCGGCAACUAGCACUCCGUGUGUGUCCCGCCUGGUCACUGGCCACCACCUGUGGGCCAGCAAGAAUGGCCGCCAUGUCCUGGGCCUGAUUGAGGACUAUGAGGCCCUGCUCAAЖCAGAUCAGCCAGGGACAGAGGCUCCUUGCUGAAAUGGACAUUCAAACCCAAGAGGCUCCCAGCUCCACAAGUCAAGAGCUGGGAACAAAGGGUCCACACCCAGCACCACUGAGCAAGUUUGUGAGCAGUGUGAGCACGGCCAAGCUGACCCUGGAAGAGGCCUACAGGCGGCUGAAGCUUCUCUGGAGAGUCUCACUCCCCGAGGAUGGCCAGUGCCCCCUUCACUGUGAGCAGAUUGGAGAAAUGAAGGCAGAGGUCACCAAЖCUACAUAAAAAAUUGUUUGAACAAGAAAAGAAGUUGCAAAACACCAUGAAGCUUUUGCAGCUGAGCAAGCGCCAGGAAAAAGUCAUCUUUGAUCAAUUGGUCGUAACCCACAAAAUCCUUCGGAAGGCCAGAGGAAACCUGGAGCUUAGGCCUGGGGGAGCCCAPCCAGGAACAUGCAGUCCCAGCAGЖCCAGGCUCCUGAGAAGAACUUUCAGCCAAUAAAGCUUGUGCUUCCCCCACCGAGCUCACGCUGUCUCUUUGUUCCAAGUGUGGUUCCUAUUUAUUGAGGAAGAAAGAGCUGUCUGGCCAAAGGAAAUCUAUUUUUUCCCUUCAUGUUUUCUCUCUGAAAGUUGGCUUGAGAGUUGUUGUCAGAAAGGUGCAGGUGCUCCACAAACGGGUGGUAAAAAGGCCUCGAGCUCUUGGAUGUUGUAUUUCAGAUCAGGGGCЖGGCACCGGAGUUGAGGCUGUGCGCCUUGGUGGGCUUCACGUCUUCCCCUGGAUUUGCUUAGUACUCAGCCAGUGCCACAGUUUGAAGAUUCUCAUUAAAUGAUU
Sequence (SHORT NAMES ENCODING)	GGAGUUGCUGCAGGCCAGUGAUGUGGAUUACUGUGUGGCCGAGGGUUUCCAGGAACAGCUGAAUCAAUGUGCUGAGCUGCUGGAGAAAUUGGAAAAGCUAUUUCUCAACGGUAGGUAGGGUGAGGAAAAUCAGUUGGAGUGGAAAUGAACACCCAGAAUGAACUGAUGGAGAGGAUUGAGGAAGACAACUUAACCUACCAACAUCUUCUGCCUGAAUCUCCUGAGCCUUCAGCCUCUCAUGCGCUCUCUGAUUAUGAAACAUCUGAAAAGUCCUUCUUCUCACGAGACCAGAAGCAAGAUAAUGAGACAGAGAAGACUUCAGUUAUGGUGAACAGUUUUUCUCAAGACUUACUAAUGGAACACAUACAGGAAAUUCGAACUUUGAGAAAGCGUUUAGAAGAAUCUAUUAAAACAAAUGAGAAGCUACGGAAACAGUUGGAACGGCAAGGAUCUGAAUUUGUUCAAGGUUCUACAAGCAUUUUUGCUUCUGGUUCAGAGCUUCAUAGUUCUCUAACAUCAGAAAUUCAUUUCUUGAGGAAGCAGAACCAGGCCCUCAAUGCAAUGCUCAUUAAAGGAUCCAGAGAUAAACAGAAGGAGAAUGACAAAUUACGAGAGUCCCUCUCCAGGAAGACCGUGAGCCUGGAGCACCUUCAGCGGGAGUAUGCCAGCGUGAAGGAAGAAAAUGAAAGGCUGCAGAAAGAAGGCAGCGAGAAGGAGAGACACAACCAGCAGCUGAUCCAGGAGGUCCGCUGCAGCGGCCAGGAGCUGAGCAGGGUGCAGGAGGAGGUGAAGUUGAGGCAGCAGCUGCUCUCACAGAAUGACAAGCUAUUGCAGUCUCUCCGAGUGGAGCUGAAGGCGUAUGAGAAGCUGGAUGAAGAGCACAGGAGACUGAGAGAGGCGUCGGGAGAAGGCUGGAAGGGGCAGGAUCCUUUCAGGGACCUGCACAGCCUCCUGAUGGAGAUCCAGGCUCUGCGCUUGCAACUAGAAAGGAGCAUCGAAACCAGCAGCACUCUGCAGAGCAGGCUCAAGGAACAGCUGGCAAGGGGGGCAGAGAAGGCACAGGAAGGAGCCCUCACUCUGGCUGUCCAAGCCGUGUCCAUCCCUGAGGUGCCCCUUCAGCCUGACAAACACGAUGGUGACAAAUAUCCCAUGGAAAGUGAUAAUUCAUUUGAUCUGUUUGAUUCCUCCCAGGCAGUGACACCAAAAUCAGUUUCAGAGACUCCUCCACUCUCUGGGAAUGACACGGACUCCCUCUCCUGCGACAGUGGCAGUUCGGCAACUAGCACUCCGUGUGUGUCCCGCCUGGUCACUGGCCACCACCUGUGGGCCAGCAAGAAUGGCCGCCAUGUCCUGGGCCUGAUUGAGGACUAUGAGGCCCUGCUCAAm6ACAGAUCAGCCAGGGACAGAGGCUCCUUGCUGAAAUGGACAUUCAAACCCAAGAGGCUCCCAGCUCCACAAGUCAAGAGCUGGGAACAAAGGGUCCACACCCAGCACCACUGAGCAAGUUUGUGAGCAGUGUGAGCACGGCCAAGCUGACCCUGGAAGAGGCCUACAGGCGGCUGAAGCUUCUCUGGAGAGUCUCACUCCCCGAGGAUGGCCAGUGCCCCCUUCACUGUGAGCAGAUUGGAGAAAUGAAGGCAGAGGUCACCAAm6ACUACAUAAAAAAUUGUUUGAACAAGAAAAGAAGUUGCAAAACACCAUGAAGCUUUUGCAGCUGAGCAAGCGCCAGGAAAAAGUCAUCUUUGAUCAAUUGGUCGUAACCCACAAAAUCCUUCGGAAGGCCAGAGGAAACCUGGAGCUUAGGCCUGGGGGAGCCCAYCCAGGAACAUGCAGUCCCAGCAGm6ACCAGGCUCCUGAGAAGAACUUUCAGCCAAUAAAGCUUGUGCUUCCCCCACCGAGCUCACGCUGUCUCUUUGUUCCAAGUGUGGUUCCUAUUUAUUGAGGAAGAAAGAGCUGUCUGGCCAAAGGAAAUCUAUUUUUUCCCUUCAUGUUUUCUCUCUGAAAGUUGGCUUGAGAGUUGUUGUCAGAAAGGUGCAGGUGCUCCACAAACGGGUGGUAAAAAGGCCUCGAGCUCUUGGAUGUUGUAUUUCAGAUCAGGGGCm6AGGCACCGGAGUUGAGGCUGUGCGCCUUGGUGGGCUUCACGUCUUCCCCUGGAUUUGCUUAGUACUCAGCCAGUGCCACAGUUUGAAGAUUCUCAUUAAAUGAUU
Sequence (MODOMICS CODE ENCODING)	GGAGUUGCUGCAGGCCAGUGAUGUGGAUUACUGUGUGGCCGAGGGUUUCCAGGAACAGCUGAAUCAAUGUGCUGAGCUGCUGGAGAAAUUGGAAAAGCUAUUUCUCAACGGUAGGUAGGGUGAGGAAAAUCAGUUGGAGUGGAAAUGAACACCCAGAAUGAACUGAUGGAGAGGAUUGAGGAAGACAACUUAACCUACCAACAUCUUCUGCCUGAAUCUCCUGAGCCUUCAGCCUCUCAUGCGCUCUCUGAUUAUGAAACAUCUGAAAAGUCCUUCUUCUCACGAGACCAGAAGCAAGAUAAUGAGACAGAGAAGACUUCAGUUAUGGUGAACAGUUUUUCUCAAGACUUACUAAUGGAACACAUACAGGAAAUUCGAACUUUGAGAAAGCGUUUAGAAGAAUCUAUUAAAACAAAUGAGAAGCUACGGAAACAGUUGGAACGGCAAGGAUCUGAAUUUGUUCAAGGUUCUACAAGCAUUUUUGCUUCUGGUUCAGAGCUUCAUAGUUCUCUAACAUCAGAAAUUCAUUUCUUGAGGAAGCAGAACCAGGCCCUCAAUGCAAUGCUCAUUAAAGGAUCCAGAGAUAAACAGAAGGAGAAUGACAAAUUACGAGAGUCCCUCUCCAGGAAGACCGUGAGCCUGGAGCACCUUCAGCGGGAGUAUGCCAGCGUGAAGGAAGAAAAUGAAAGGCUGCAGAAAGAAGGCAGCGAGAAGGAGAGACACAACCAGCAGCUGAUCCAGGAGGUCCGCUGCAGCGGCCAGGAGCUGAGCAGGGUGCAGGAGGAGGUGAAGUUGAGGCAGCAGCUGCUCUCACAGAAUGACAAGCUAUUGCAGUCUCUCCGAGUGGAGCUGAAGGCGUAUGAGAAGCUGGAUGAAGAGCACAGGAGACUGAGAGAGGCGUCGGGAGAAGGCUGGAAGGGGCAGGAUCCUUUCAGGGACCUGCACAGCCUCCUGAUGGAGAUCCAGGCUCUGCGCUUGCAACUAGAAAGGAGCAUCGAAACCAGCAGCACUCUGCAGAGCAGGCUCAAGGAACAGCUGGCAAGGGGGGCAGAGAAGGCACAGGAAGGAGCCCUCACUCUGGCUGUCCAAGCCGUGUCCAUCCCUGAGGUGCCCCUUCAGCCUGACAAACACGAUGGUGACAAAUAUCCCAUGGAAAGUGAUAAUUCAUUUGAUCUGUUUGAUUCCUCCCAGGCAGUGACACCAAAAUCAGUUUCAGAGACUCCUCCACUCUCUGGGAAUGACACGGACUCCCUCUCCUGCGACAGUGGCAGUUCGGCAACUAGCACUCCGUGUGUGUCCCGCCUGGUCACUGGCCACCACCUGUGGGCCAGCAAGAAUGGCCGCCAUGUCCUGGGCCUGAUUGAGGACUAUGAGGCCCUGCUCAA2000000006ACAGAUCAGCCAGGGACAGAGGCUCCUUGCUGAAAUGGACAUUCAAACCCAAGAGGCUCCCAGCUCCACAAGUCAAGAGCUGGGAACAAAGGGUCCACACCCAGCACCACUGAGCAAGUUUGUGAGCAGUGUGAGCACGGCCAAGCUGACCCUGGAAGAGGCCUACAGGCGGCUGAAGCUUCUCUGGAGAGUCUCACUCCCCGAGGAUGGCCAGUGCCCCCUUCACUGUGAGCAGAUUGGAGAAAUGAAGGCAGAGGUCACCAA2000000006ACUACAUAAAAAAUUGUUUGAACAAGAAAAGAAGUUGCAAAACACCAUGAAGCUUUUGCAGCUGAGCAAGCGCCAGGAAAAAGUCAUCUUUGAUCAAUUGGUCGUAACCCACAAAAUCCUUCGGAAGGCCAGAGGAAACCUGGAGCUUAGGCCUGGGGGAGCCCA2000000009UCCAGGAACAUGCAGUCCCAGCAG2000000006ACCAGGCUCCUGAGAAGAACUUUCAGCCAAUAAAGCUUGUGCUUCCCCCACCGAGCUCACGCUGUCUCUUUGUUCCAAGUGUGGUUCCUAUUUAUUGAGGAAGAAAGAGCUGUCUGGCCAAAGGAAAUCUAUUUUUUCCCUUCAUGUUUUCUCUCUGAAAGUUGGCUUGAGAGUUGUUGUCAGAAAGGUGCAGGUGCUCCACAAACGGGUGGUAAAAAGGCCUCGAGCUCUUGGAUGUUGUAUUUCAGAUCAGGGGC2000000006AGGCACCGGAGUUGAGGCUGUGCGCCUUGGUGGGCUUCACGUCUUCCCCUGGAUUUGCUUAGUACUCAGCCAGUGCCACAGUUUGAAGAUUCUCAUUAAAUGAUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1386	1650	1815	1839	2096
Modification Positions	m6A	m6A	Y	m6A	m6A
Genomic Coordinates	9:120402896:-	9:120394609:-	9:120389272:-	9:120389248:-	9:120388991:-
Level of Experimental Evidence	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda	BtsJQJ3DteUq dknfVe6BK8aP kx7BHU7ZycYE oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp	BtsJQJ3DteUq dknfVe6BK8aP kx7BHU7ZycYE oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp	BsCW7emuRX7M Lny8GcCeVGc9 XUkp6ghERQML