General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000687129
Gene ID:	ENSG00000226752
Gene Name:	CUTALP
Sequence (UNICHARACTER ENCODING)	GUCUGGCGUCAUCUAGGUCGCUGCUCAGGGAAAUGCGGAGGCCAGUAGGCUUACGUGUUUACCGCGUAGGGCAAAGCCUUGCCAAAUUCCCGGCCAGCGGAGCGGCGAGGGUGGGGACUCACGGGAAGUUAAACAGCCUCGUCGGCGUCCUCGAGGCUCCAAAACCAGGCUCUAGGCGGGGACGACUGCAGCCGUUAUGGAGGCCACCGCGGCUACGGCCGCGGCUGAGGCCUCCCCAGGUGGAGCGGUGGCCUGGAGGGGAAUCUUGAUCCUGGGCCAGCCACCUGUCAAGAGGAGGCGGAGCGUCAUGCCUCUGGAAGACUGGAUGAAUAUUCUCCAGGAGCCUGACGAAGGCGUGAGUAAUAGGGACGUGCGCCGCCUUGUUGGUGUUGAUCAGUCCACCAAGGAGAAGCAGCUGGUCGCAGUGGCCGUACCUGUAAUCCCAGCGCUUUGGGAGGCCGCGGCGGGAGGAUCGCUUGAGCCCGGGAGUUCGAGACCAGCCUGGGCAACAUAGUGAGAAACCCGUCUCUACCAAAAAGAAAAAAAAAAAAAAAGGAAAAAAAUUAGUGCGGUGUGGUGGCACGCACCUGUAGUCCCAGCUACUCGGGAGGCUGAAGCGGGAGGGUCCCCUAAGUCUAGGAGGUCGAGGCUUCAGUGAGCGGUGAUUGUGCCACUGCACUCCAGCCUGGGCGACAGAGCAAGACCCUGCUUUCCCCUCUUGUCCUCCACUACCCUCAGGAAACCAAGAAAGACCAGCGUGGAGAGUUGGUCGCCCAUCUGCUCUAAGCUGCUGUGUAUUCCCCUGUAAUGUAAACAUCGUGAAGGUGGAGACCCAGUUAACCUUUUAGGUGGAAGGCCAGAUGACAGAGGGCGGCAUCUGACCCGGAAGGCCCUCUGCAACCAGGCCAAAUACAUCUACAGGGAACCAAUGGGAAACAUCUGGGGAGGACAACCCAAAUAAGUAUCAUGCGAGCAAGGGAUGGUUUGAGAACUUUAAAAAUCGCUGCUGUUUUGCAACAUACGAAGUUGAUGGGGAGGAAGGACCCUUAAAUCCUGAGUGGGUAUCGAGUAUUCCAAGCAACUGGAGAGAGGCUUUGUGCCUCAACAGGUCUUCAACGCCAAGGAGAUGACCCAUCUUUUGCAGUGCAUGCCUUCCUACUUUUGGGGCAAAAGACAAAAAUCUGGAAAGCUUAGAGGAAGCUAAGGЖCAGGAUUUCCCUCAUUUUUUUGUGGCAGUGCCUCAGGUGACAAAAUGAUAAAACCACUGCUGCUUUACAAAGЖCUCUAACACCCCACUUGUCUUUUAGAGAUAAACGCCUUCCUGUUUUCUUGUAAUCACACCCAGAAUCACCACUGCCACUUUUUGGAUUAGUUUUACAAUUUUUUUAUCCAUCAAAUCCGAAGUCAUUUAACAAAAAAAAUCUGGAAAUCAGAAUGUUGCUAЖCUGUGGЖCAGAGGUCCCAAUCACCCAGAUUCAUUAUUCUUUGUUCAUUCUAAUGUUGAUACUGUGUUUCUCCCUCAGGAAGGCCCUAGCUUUCUUCAGCCCUUGGGUCAGGGUAUAACUGAAGCAUUUGAACAUAAUCAAGCAUAUGUUUGACCACUUUGCUGЖCUGUAUUGAAAAAACCCUCACCUUACUCUGAAAGAAGCAUGGCAACAGUACAAUAUUGCCGAUGCUUUGGUAGUGAUAAAAGAGGUGAUGGGUGAUAUAAAAUCAGCCACUCUUAAGCUUGCUGGAAЖCUGUGGGAGGAUGUGUGAAUGAUGCAUAUUUCCCUAGAGCUAAUGAAGAAGUUAAAAAAAAUCUUAGUGUCUGCAAAACAGGUGGGUUUAAGAUUUAUUGAUAUUAGGGAAAGUGAAAUUAAUGAGCUACUCAAGUUUCUGUCUUUGGUCAUCACUGAGAGUCUAUUUCCAUAGGAAGAAGUCUUUGCAGAGGAAAUUGAAUGCUGUCUGAUGCUACAAUUCAUAUGGAUCCUUUCCUGGAUUGAAGCCUGЖCUUUUAAAAAAGGUUUCAAUAAAUUGCUUAUACCUAUGAAGAGAUGCAAAAGAACCUUCAAAAUAAAGCAAAGGACUUGAAGAAAGAGAAGGAAGACAUGAAGAAGAGGAUGUCAUUUAGGUGAAGGUGAUGGAUACAGAAUCUGAGUCUGAGGGGAGCCUGGUUGACAGAGAGACAAAAAAAGAAAUUUUUUUUUUCUGACUAAAAAAAAAAAGGAAAUUUUGUUAACAAAAUCAAGAAUUUAAAAAAAAUGCUGUGAGAGCUGAUCUAUGCA
Sequence (SHORT NAMES ENCODING)	GUCUGGCGUCAUCUAGGUCGCUGCUCAGGGAAAUGCGGAGGCCAGUAGGCUUACGUGUUUACCGCGUAGGGCAAAGCCUUGCCAAAUUCCCGGCCAGCGGAGCGGCGAGGGUGGGGACUCACGGGAAGUUAAACAGCCUCGUCGGCGUCCUCGAGGCUCCAAAACCAGGCUCUAGGCGGGGACGACUGCAGCCGUUAUGGAGGCCACCGCGGCUACGGCCGCGGCUGAGGCCUCCCCAGGUGGAGCGGUGGCCUGGAGGGGAAUCUUGAUCCUGGGCCAGCCACCUGUCAAGAGGAGGCGGAGCGUCAUGCCUCUGGAAGACUGGAUGAAUAUUCUCCAGGAGCCUGACGAAGGCGUGAGUAAUAGGGACGUGCGCCGCCUUGUUGGUGUUGAUCAGUCCACCAAGGAGAAGCAGCUGGUCGCAGUGGCCGUACCUGUAAUCCCAGCGCUUUGGGAGGCCGCGGCGGGAGGAUCGCUUGAGCCCGGGAGUUCGAGACCAGCCUGGGCAACAUAGUGAGAAACCCGUCUCUACCAAAAAGAAAAAAAAAAAAAAAGGAAAAAAAUUAGUGCGGUGUGGUGGCACGCACCUGUAGUCCCAGCUACUCGGGAGGCUGAAGCGGGAGGGUCCCCUAAGUCUAGGAGGUCGAGGCUUCAGUGAGCGGUGAUUGUGCCACUGCACUCCAGCCUGGGCGACAGAGCAAGACCCUGCUUUCCCCUCUUGUCCUCCACUACCCUCAGGAAACCAAGAAAGACCAGCGUGGAGAGUUGGUCGCCCAUCUGCUCUAAGCUGCUGUGUAUUCCCCUGUAAUGUAAACAUCGUGAAGGUGGAGACCCAGUUAACCUUUUAGGUGGAAGGCCAGAUGACAGAGGGCGGCAUCUGACCCGGAAGGCCCUCUGCAACCAGGCCAAAUACAUCUACAGGGAACCAAUGGGAAACAUCUGGGGAGGACAACCCAAAUAAGUAUCAUGCGAGCAAGGGAUGGUUUGAGAACUUUAAAAAUCGCUGCUGUUUUGCAACAUACGAAGUUGAUGGGGAGGAAGGACCCUUAAAUCCUGAGUGGGUAUCGAGUAUUCCAAGCAACUGGAGAGAGGCUUUGUGCCUCAACAGGUCUUCAACGCCAAGGAGAUGACCCAUCUUUUGCAGUGCAUGCCUUCCUACUUUUGGGGCAAAAGACAAAAAUCUGGAAAGCUUAGAGGAAGCUAAGGm6ACAGGAUUUCCCUCAUUUUUUUGUGGCAGUGCCUCAGGUGACAAAAUGAUAAAACCACUGCUGCUUUACAAAGm6ACUCUAACACCCCACUUGUCUUUUAGAGAUAAACGCCUUCCUGUUUUCUUGUAAUCACACCCAGAAUCACCACUGCCACUUUUUGGAUUAGUUUUACAAUUUUUUUAUCCAUCAAAUCCGAAGUCAUUUAACAAAAAAAAUCUGGAAAUCAGAAUGUUGCUAm6ACUGUGGm6ACAGAGGUCCCAAUCACCCAGAUUCAUUAUUCUUUGUUCAUUCUAAUGUUGAUACUGUGUUUCUCCCUCAGGAAGGCCCUAGCUUUCUUCAGCCCUUGGGUCAGGGUAUAACUGAAGCAUUUGAACAUAAUCAAGCAUAUGUUUGACCACUUUGCUGm6ACUGUAUUGAAAAAACCCUCACCUUACUCUGAAAGAAGCAUGGCAACAGUACAAUAUUGCCGAUGCUUUGGUAGUGAUAAAAGAGGUGAUGGGUGAUAUAAAAUCAGCCACUCUUAAGCUUGCUGGAAm6ACUGUGGGAGGAUGUGUGAAUGAUGCAUAUUUCCCUAGAGCUAAUGAAGAAGUUAAAAAAAAUCUUAGUGUCUGCAAAACAGGUGGGUUUAAGAUUUAUUGAUAUUAGGGAAAGUGAAAUUAAUGAGCUACUCAAGUUUCUGUCUUUGGUCAUCACUGAGAGUCUAUUUCCAUAGGAAGAAGUCUUUGCAGAGGAAAUUGAAUGCUGUCUGAUGCUACAAUUCAUAUGGAUCCUUUCCUGGAUUGAAGCCUGm6ACUUUUAAAAAAGGUUUCAAUAAAUUGCUUAUACCUAUGAAGAGAUGCAAAAGAACCUUCAAAAUAAAGCAAAGGACUUGAAGAAAGAGAAGGAAGACAUGAAGAAGAGGAUGUCAUUUAGGUGAAGGUGAUGGAUACAGAAUCUGAGUCUGAGGGGAGCCUGGUUGACAGAGAGACAAAAAAAGAAAUUUUUUUUUUCUGACUAAAAAAAAAAAGGAAAUUUUGUUAACAAAAUCAAGAAUUUAAAAAAAAUGCUGUGAGAGCUGAUCUAUGCA
Sequence (MODOMICS CODE ENCODING)	GUCUGGCGUCAUCUAGGUCGCUGCUCAGGGAAAUGCGGAGGCCAGUAGGCUUACGUGUUUACCGCGUAGGGCAAAGCCUUGCCAAAUUCCCGGCCAGCGGAGCGGCGAGGGUGGGGACUCACGGGAAGUUAAACAGCCUCGUCGGCGUCCUCGAGGCUCCAAAACCAGGCUCUAGGCGGGGACGACUGCAGCCGUUAUGGAGGCCACCGCGGCUACGGCCGCGGCUGAGGCCUCCCCAGGUGGAGCGGUGGCCUGGAGGGGAAUCUUGAUCCUGGGCCAGCCACCUGUCAAGAGGAGGCGGAGCGUCAUGCCUCUGGAAGACUGGAUGAAUAUUCUCCAGGAGCCUGACGAAGGCGUGAGUAAUAGGGACGUGCGCCGCCUUGUUGGUGUUGAUCAGUCCACCAAGGAGAAGCAGCUGGUCGCAGUGGCCGUACCUGUAAUCCCAGCGCUUUGGGAGGCCGCGGCGGGAGGAUCGCUUGAGCCCGGGAGUUCGAGACCAGCCUGGGCAACAUAGUGAGAAACCCGUCUCUACCAAAAAGAAAAAAAAAAAAAAAGGAAAAAAAUUAGUGCGGUGUGGUGGCACGCACCUGUAGUCCCAGCUACUCGGGAGGCUGAAGCGGGAGGGUCCCCUAAGUCUAGGAGGUCGAGGCUUCAGUGAGCGGUGAUUGUGCCACUGCACUCCAGCCUGGGCGACAGAGCAAGACCCUGCUUUCCCCUCUUGUCCUCCACUACCCUCAGGAAACCAAGAAAGACCAGCGUGGAGAGUUGGUCGCCCAUCUGCUCUAAGCUGCUGUGUAUUCCCCUGUAAUGUAAACAUCGUGAAGGUGGAGACCCAGUUAACCUUUUAGGUGGAAGGCCAGAUGACAGAGGGCGGCAUCUGACCCGGAAGGCCCUCUGCAACCAGGCCAAAUACAUCUACAGGGAACCAAUGGGAAACAUCUGGGGAGGACAACCCAAAUAAGUAUCAUGCGAGCAAGGGAUGGUUUGAGAACUUUAAAAAUCGCUGCUGUUUUGCAACAUACGAAGUUGAUGGGGAGGAAGGACCCUUAAAUCCUGAGUGGGUAUCGAGUAUUCCAAGCAACUGGAGAGAGGCUUUGUGCCUCAACAGGUCUUCAACGCCAAGGAGAUGACCCAUCUUUUGCAGUGCAUGCCUUCCUACUUUUGGGGCAAAAGACAAAAAUCUGGAAAGCUUAGAGGAAGCUAAGG2000000006ACAGGAUUUCCCUCAUUUUUUUGUGGCAGUGCCUCAGGUGACAAAAUGAUAAAACCACUGCUGCUUUACAAAG2000000006ACUCUAACACCCCACUUGUCUUUUAGAGAUAAACGCCUUCCUGUUUUCUUGUAAUCACACCCAGAAUCACCACUGCCACUUUUUGGAUUAGUUUUACAAUUUUUUUAUCCAUCAAAUCCGAAGUCAUUUAACAAAAAAAAUCUGGAAAUCAGAAUGUUGCUA2000000006ACUGUGG2000000006ACAGAGGUCCCAAUCACCCAGAUUCAUUAUUCUUUGUUCAUUCUAAUGUUGAUACUGUGUUUCUCCCUCAGGAAGGCCCUAGCUUUCUUCAGCCCUUGGGUCAGGGUAUAACUGAAGCAUUUGAACAUAAUCAAGCAUAUGUUUGACCACUUUGCUG2000000006ACUGUAUUGAAAAAACCCUCACCUUACUCUGAAAGAAGCAUGGCAACAGUACAAUAUUGCCGAUGCUUUGGUAGUGAUAAAAGAGGUGAUGGGUGAUAUAAAAUCAGCCACUCUUAAGCUUGCUGGAA2000000006ACUGUGGGAGGAUGUGUGAAUGAUGCAUAUUUCCCUAGAGCUAAUGAAGAAGUUAAAAAAAAUCUUAGUGUCUGCAAAACAGGUGGGUUUAAGAUUUAUUGAUAUUAGGGAAAGUGAAAUUAAUGAGCUACUCAAGUUUCUGUCUUUGGUCAUCACUGAGAGUCUAUUUCCAUAGGAAGAAGUCUUUGCAGAGGAAAUUGAAUGCUGUCUGAUGCUACAAUUCAUAUGGAUCCUUUCCUGGAUUGAAGCCUG2000000006ACUUUUAAAAAAGGUUUCAAUAAAUUGCUUAUACCUAUGAAGAGAUGCAAAAGAACCUUCAAAAUAAAGCAAAGGACUUGAAGAAAGAGAAGGAAGACAUGAAGAAGAGGAUGUCAUUUAGGUGAAGGUGAUGGAUACAGAAUCUGAGUCUGAGGGGAGCCUGGUUGACAGAGAGACAAAAAAAGAAAUUUUUUUUUUCUGACUAAAAAAAAAAAGGAAAUUUUGUUAACAAAAUCAAGAAUUUAAAAAAAAUGCUGUGAGAGCUGAUCUAUGCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1207	1280	1442	1449	1606	1734	1986
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	9:120844291:+	9:120844364:+	9:120844526:+	9:120844533:+	9:120844690:+	9:120844818:+	9:120845070:+
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	Lny8GcCeVGc9 UKen6WEino9G	VL7zkHvkfkoB WdHxkJGRmFxn KTLz8piFYdwC Lny8GcCeVGc9 UKen6WEino9G	6UuHp6YApVKv VL7zkHvkfkoB WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 Lny8GcCeVGc9	6UuHp6YApVKv VL7zkHvkfkoB WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi	8cMbzB4aD5Se 93arJtwJmuS9 Lny8GcCeVGc9 UKen6WEino9G	6UuHp6YApVKv jNkxUQNx8GRd VL7zkHvkfkoB WdHxkJGRmFxn Lny8GcCeVGc9	BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi XUkp6ghERQML