General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000374879
Gene ID:	ENSG00000241697
Gene Name:	TMEFF1
Sequence (UNICHARACTER ENCODING)	GUCUUUGUGACGCGGUGGCAACGGCCACGGACACAAAGGGAAGGCGAGGAGGCGAGCAAGAGGCUGGGCCUGCCUCCGGCCCGCGACCCCCGCCCGCCGCGCGCGCGCCCGCCCGCUCCCCUCGCCGCGGUGUCCCCCACGCCGGCUCGCACCCUCGCGCGCACCCUUGCGCGCCCGCGACCCUCGCACGCGCCCGGACCCGCCGACUCCGUCCCGAGCGCCGCGGGCCCGGGCCUGGCGGACGCUGCGGGUGGGGCGGGGAUGCUGACGGGCUGCUCCCCGGCUCAGCGGCGCGGCUGCUAGGAGGCACCGAGGCAGCGGCGGGGCUCUGGGCGCGCGGCUGGAUGCCCCCGGCCUGCGGCUCCCUGCGCUUCCCGCCGUCCAGGGGCACCAGUCAUGGGCGCCGCAGCCGCUGAGGCGCCGCUCCGGCUGCCUGCCGCGCCUCCGCUCGCCUUCUGCUGCUACACGUCGGUGCUUCUGCUCUUCGCCUUCUCUCUGCCCGGGAGCCGCGCGUCCAACCAGCCCCCGGGUGGUGGCGGCGGCAGCGGCGGGGACUGUCCCGGCGGCAAAGGCAAGAGCAUCAACUGCUCAGAAUUAAAUGUGAGGGAGUCUGACGUAAGAGUUUGUGAUGAGUCAUCAUGUAAAUAUGGAGGAGUCUGUAAAGAAGAUGGAGAUGGUUUGAAAUGUGCAUGCCAAUUUCAGUGCCAUACAAAUUAUAUUCCUGUCUGUGGAUCAAAUGGGGACACUUAUCAAAAUGAAUGCUUUCUCAGAAGGGCUGCUUGUAAGCACCAGAAAGAGAUAACAGUAAUAGCAAGAGGACCAUGCUACUCUGAUAAUGGAUCUGGAUCUGGAGAAGGAGAAGAGGAAGGGUCAGGGGCAGAAGUUCACAGAAAACACUCCAAGUGUGGACCCUGCAAAUAUAAAGCUGAGUGUGAUGAAGAUGCAGAAAAUGUUGGGUGUGUAUGUAAUAUAGAUUGCAGUGGAUACAGUUUUAAUCCUGUGUGUGCUUCUGAUGGGAGUUCCUAUAACAAUCCCUGUUUUGUUCGAGAAGCAUCUUGUAUAAAGCAAGAACAAAUUGAUAUAAGGCAUCUUGGUCAUUGCACAGAUACAGAUGACACUAGUUUGUUGGGAAAGAAAGAUGAUGGACUACAAUAUCGACCAGAUGUGAAAGAUGCUAGUGAUCAAAGAGAAGAUGUUUAUAUUGGAAACCACAUGCCUUGCCCUGAAAACCUCAAUGGUUACUGCAUCCAUGGAAAAUGUGAAUUCAUCUAUUCUACUCAGAAGGCUUCUUGUAGAUGUGAAUCUGGCUACACUGGACAGCACUGUGAAAAGACAGACUPUAGUAUUCUCUAUGUAGUGCCAAGUAGGCAAAAGCUCACUCAUGUUCUUAUUGCAGCAAUUAUUGGAGCUGUACAGAUUGCCAUCAUAGUAGCAAUUGUAAUGUGCAUAACAAGAAAAUGCCCCAAAAACAAUAGAGGACGUCGACAGAAGCAAAACCUAGGUCAUUUUACUUCAGAUACGUCAPCCAGAAUGGUUUAAACUGAUGACUUUUAUAUGUACACUGACCAUGUGAUGUACAUUUAUUAUGUCUUUUUUUAAAGAAUGGAAAUAUUUAUUUCAGAGGCCUUAUUUUUGGЖCAUUUUUAGUGUAGUACUGUUGGCUCGUAUUUAGAAUAUUCAGCUACGACAGUUUUGGЖCUGUUUAGUAGUCUUUGUUUUAUGUUUUUAAAUACAGAAAUUGCUUUCACAAAUUUGUACCACAUGGUAAUUCUAAGACUUGUUCUPUACCCAUGGAAUGUAAUAUUUUUGCAAAGAUGGЖCUACUUCACAAAUGGUUAUAAAGUCAUAUCCACUUCUUCCACAAUGACCACAGCAAAUGACCAAGCAUGAACUAAAGGUAAAGAUGUUUACAGAUUACUUUUCUUACAAAAAAAAUCUAGAAGACACUGUGUUUAAAUAGAUAUUUAAAUGUUUUUGAGAUUUAGUAACUGAUUUUUUAGACACUGCCUAUCGCAUGAACUGUAAAGCUGUGUGUAUUAGGUGUAAAAUAUUUAUAAGAUAUAUGGЖCUGGGGAAUUUGAUUAUUCCUCCCUUUGAAAAAAUAGUCCUAAUAAUUUGAACAAAUAUGUUAGUAAUGAUGGAЖCAGAUCAAUGAAAAGUAGAUAUAGAUAUUGUGAAAAUAGGCUGUUUAACAAACAGAUUGGAAUAAAGCCUAUUCUACCAGUUAAACUACUPUAAUACACAUUCAUUUUUAAAGAAAAUGUUUGUUUUAACAUAAAUAAACAAAUCGUAUCAGUGUUUGUGAAUAAAAUACAAAAAUGAUUGUUAAUGAUUGGUGCUCUUAAAGUGAGCUUAAAAUUUAUCCAAGACGUAUAUCCAAAUUUGUCCUGUAGUAAUAGAUUAAUAUUCAUAGAUUGUUGGUGUUUAAAGAUCUGAAGUGUGAGUAGAAUGUAUUCAGCUGUUUAACAUGUAGUUUAGAUAUUCAAAAGUAUGCAUGUAGAAUUUAAAGAAUAUGUUAAAAAUUAUUAAUUUUAAUAUUUUGUUUGGAAAAGCAUGUUAUAAUAUAAUGUUUUCACUAUA
Sequence (SHORT NAMES ENCODING)	GUCUUUGUGACGCGGUGGCAACGGCCACGGACACAAAGGGAAGGCGAGGAGGCGAGCAAGAGGCUGGGCCUGCCUCCGGCCCGCGACCCCCGCCCGCCGCGCGCGCGCCCGCCCGCUCCCCUCGCCGCGGUGUCCCCCACGCCGGCUCGCACCCUCGCGCGCACCCUUGCGCGCCCGCGACCCUCGCACGCGCCCGGACCCGCCGACUCCGUCCCGAGCGCCGCGGGCCCGGGCCUGGCGGACGCUGCGGGUGGGGCGGGGAUGCUGACGGGCUGCUCCCCGGCUCAGCGGCGCGGCUGCUAGGAGGCACCGAGGCAGCGGCGGGGCUCUGGGCGCGCGGCUGGAUGCCCCCGGCCUGCGGCUCCCUGCGCUUCCCGCCGUCCAGGGGCACCAGUCAUGGGCGCCGCAGCCGCUGAGGCGCCGCUCCGGCUGCCUGCCGCGCCUCCGCUCGCCUUCUGCUGCUACACGUCGGUGCUUCUGCUCUUCGCCUUCUCUCUGCCCGGGAGCCGCGCGUCCAACCAGCCCCCGGGUGGUGGCGGCGGCAGCGGCGGGGACUGUCCCGGCGGCAAAGGCAAGAGCAUCAACUGCUCAGAAUUAAAUGUGAGGGAGUCUGACGUAAGAGUUUGUGAUGAGUCAUCAUGUAAAUAUGGAGGAGUCUGUAAAGAAGAUGGAGAUGGUUUGAAAUGUGCAUGCCAAUUUCAGUGCCAUACAAAUUAUAUUCCUGUCUGUGGAUCAAAUGGGGACACUUAUCAAAAUGAAUGCUUUCUCAGAAGGGCUGCUUGUAAGCACCAGAAAGAGAUAACAGUAAUAGCAAGAGGACCAUGCUACUCUGAUAAUGGAUCUGGAUCUGGAGAAGGAGAAGAGGAAGGGUCAGGGGCAGAAGUUCACAGAAAACACUCCAAGUGUGGACCCUGCAAAUAUAAAGCUGAGUGUGAUGAAGAUGCAGAAAAUGUUGGGUGUGUAUGUAAUAUAGAUUGCAGUGGAUACAGUUUUAAUCCUGUGUGUGCUUCUGAUGGGAGUUCCUAUAACAAUCCCUGUUUUGUUCGAGAAGCAUCUUGUAUAAAGCAAGAACAAAUUGAUAUAAGGCAUCUUGGUCAUUGCACAGAUACAGAUGACACUAGUUUGUUGGGAAAGAAAGAUGAUGGACUACAAUAUCGACCAGAUGUGAAAGAUGCUAGUGAUCAAAGAGAAGAUGUUUAUAUUGGAAACCACAUGCCUUGCCCUGAAAACCUCAAUGGUUACUGCAUCCAUGGAAAAUGUGAAUUCAUCUAUUCUACUCAGAAGGCUUCUUGUAGAUGUGAAUCUGGCUACACUGGACAGCACUGUGAAAAGACAGACUYUAGUAUUCUCUAUGUAGUGCCAAGUAGGCAAAAGCUCACUCAUGUUCUUAUUGCAGCAAUUAUUGGAGCUGUACAGAUUGCCAUCAUAGUAGCAAUUGUAAUGUGCAUAACAAGAAAAUGCCCCAAAAACAAUAGAGGACGUCGACAGAAGCAAAACCUAGGUCAUUUUACUUCAGAUACGUCAYCCAGAAUGGUUUAAACUGAUGACUUUUAUAUGUACACUGACCAUGUGAUGUACAUUUAUUAUGUCUUUUUUUAAAGAAUGGAAAUAUUUAUUUCAGAGGCCUUAUUUUUGGm6ACAUUUUUAGUGUAGUACUGUUGGCUCGUAUUUAGAAUAUUCAGCUACGACAGUUUUGGm6ACUGUUUAGUAGUCUUUGUUUUAUGUUUUUAAAUACAGAAAUUGCUUUCACAAAUUUGUACCACAUGGUAAUUCUAAGACUUGUUCUYUACCCAUGGAAUGUAAUAUUUUUGCAAAGAUGGm6ACUACUUCACAAAUGGUUAUAAAGUCAUAUCCACUUCUUCCACAAUGACCACAGCAAAUGACCAAGCAUGAACUAAAGGUAAAGAUGUUUACAGAUUACUUUUCUUACAAAAAAAAUCUAGAAGACACUGUGUUUAAAUAGAUAUUUAAAUGUUUUUGAGAUUUAGUAACUGAUUUUUUAGACACUGCCUAUCGCAUGAACUGUAAAGCUGUGUGUAUUAGGUGUAAAAUAUUUAUAAGAUAUAUGGm6ACUGGGGAAUUUGAUUAUUCCUCCCUUUGAAAAAAUAGUCCUAAUAAUUUGAACAAAUAUGUUAGUAAUGAUGGAm6ACAGAUCAAUGAAAAGUAGAUAUAGAUAUUGUGAAAAUAGGCUGUUUAACAAACAGAUUGGAAUAAAGCCUAUUCUACCAGUUAAACUACUYUAAUACACAUUCAUUUUUAAAGAAAAUGUUUGUUUUAACAUAAAUAAACAAAUCGUAUCAGUGUUUGUGAAUAAAAUACAAAAAUGAUUGUUAAUGAUUGGUGCUCUUAAAGUGAGCUUAAAAUUUAUCCAAGACGUAUAUCCAAAUUUGUCCUGUAGUAAUAGAUUAAUAUUCAUAGAUUGUUGGUGUUUAAAGAUCUGAAGUGUGAGUAGAAUGUAUUCAGCUGUUUAACAUGUAGUUUAGAUAUUCAAAAGUAUGCAUGUAGAAUUUAAAGAAUAUGUUAAAAAUUAUUAAUUUUAAUAUUUUGUUUGGAAAAGCAUGUUAUAAUAUAAUGUUUUCACUAUA
Sequence (MODOMICS CODE ENCODING)	GUCUUUGUGACGCGGUGGCAACGGCCACGGACACAAAGGGAAGGCGAGGAGGCGAGCAAGAGGCUGGGCCUGCCUCCGGCCCGCGACCCCCGCCCGCCGCGCGCGCGCCCGCCCGCUCCCCUCGCCGCGGUGUCCCCCACGCCGGCUCGCACCCUCGCGCGCACCCUUGCGCGCCCGCGACCCUCGCACGCGCCCGGACCCGCCGACUCCGUCCCGAGCGCCGCGGGCCCGGGCCUGGCGGACGCUGCGGGUGGGGCGGGGAUGCUGACGGGCUGCUCCCCGGCUCAGCGGCGCGGCUGCUAGGAGGCACCGAGGCAGCGGCGGGGCUCUGGGCGCGCGGCUGGAUGCCCCCGGCCUGCGGCUCCCUGCGCUUCCCGCCGUCCAGGGGCACCAGUCAUGGGCGCCGCAGCCGCUGAGGCGCCGCUCCGGCUGCCUGCCGCGCCUCCGCUCGCCUUCUGCUGCUACACGUCGGUGCUUCUGCUCUUCGCCUUCUCUCUGCCCGGGAGCCGCGCGUCCAACCAGCCCCCGGGUGGUGGCGGCGGCAGCGGCGGGGACUGUCCCGGCGGCAAAGGCAAGAGCAUCAACUGCUCAGAAUUAAAUGUGAGGGAGUCUGACGUAAGAGUUUGUGAUGAGUCAUCAUGUAAAUAUGGAGGAGUCUGUAAAGAAGAUGGAGAUGGUUUGAAAUGUGCAUGCCAAUUUCAGUGCCAUACAAAUUAUAUUCCUGUCUGUGGAUCAAAUGGGGACACUUAUCAAAAUGAAUGCUUUCUCAGAAGGGCUGCUUGUAAGCACCAGAAAGAGAUAACAGUAAUAGCAAGAGGACCAUGCUACUCUGAUAAUGGAUCUGGAUCUGGAGAAGGAGAAGAGGAAGGGUCAGGGGCAGAAGUUCACAGAAAACACUCCAAGUGUGGACCCUGCAAAUAUAAAGCUGAGUGUGAUGAAGAUGCAGAAAAUGUUGGGUGUGUAUGUAAUAUAGAUUGCAGUGGAUACAGUUUUAAUCCUGUGUGUGCUUCUGAUGGGAGUUCCUAUAACAAUCCCUGUUUUGUUCGAGAAGCAUCUUGUAUAAAGCAAGAACAAAUUGAUAUAAGGCAUCUUGGUCAUUGCACAGAUACAGAUGACACUAGUUUGUUGGGAAAGAAAGAUGAUGGACUACAAUAUCGACCAGAUGUGAAAGAUGCUAGUGAUCAAAGAGAAGAUGUUUAUAUUGGAAACCACAUGCCUUGCCCUGAAAACCUCAAUGGUUACUGCAUCCAUGGAAAAUGUGAAUUCAUCUAUUCUACUCAGAAGGCUUCUUGUAGAUGUGAAUCUGGCUACACUGGACAGCACUGUGAAAAGACAGACU2000000009UUAGUAUUCUCUAUGUAGUGCCAAGUAGGCAAAAGCUCACUCAUGUUCUUAUUGCAGCAAUUAUUGGAGCUGUACAGAUUGCCAUCAUAGUAGCAAUUGUAAUGUGCAUAACAAGAAAAUGCCCCAAAAACAAUAGAGGACGUCGACAGAAGCAAAACCUAGGUCAUUUUACUUCAGAUACGUCA2000000009UCCAGAAUGGUUUAAACUGAUGACUUUUAUAUGUACACUGACCAUGUGAUGUACAUUUAUUAUGUCUUUUUUUAAAGAAUGGAAAUAUUUAUUUCAGAGGCCUUAUUUUUGG2000000006ACAUUUUUAGUGUAGUACUGUUGGCUCGUAUUUAGAAUAUUCAGCUACGACAGUUUUGG2000000006ACUGUUUAGUAGUCUUUGUUUUAUGUUUUUAAAUACAGAAAUUGCUUUCACAAAUUUGUACCACAUGGUAAUUCUAAGACUUGUUCU2000000009UUACCCAUGGAAUGUAAUAUUUUUGCAAAGAUGG2000000006ACUACUUCACAAAUGGUUAUAAAGUCAUAUCCACUUCUUCCACAAUGACCACAGCAAAUGACCAAGCAUGAACUAAAGGUAAAGAUGUUUACAGAUUACUUUUCUUACAAAAAAAAUCUAGAAGACACUGUGUUUAAAUAGAUAUUUAAAUGUUUUUGAGAUUUAGUAACUGAUUUUUUAGACACUGCCUAUCGCAUGAACUGUAAAGCUGUGUGUAUUAGGUGUAAAAUAUUUAUAAGAUAUAUGG2000000006ACUGGGGAAUUUGAUUAUUCCUCCCUUUGAAAAAAUAGUCCUAAUAAUUUGAACAAAUAUGUUAGUAAUGAUGGA2000000006ACAGAUCAAUGAAAAGUAGAUAUAGAUAUUGUGAAAAUAGGCUGUUUAACAAACAGAUUGGAAUAAAGCCUAUUCUACCAGUUAAACUACU2000000009UUAAUACACAUUCAUUUUUAAAGAAAAUGUUUGUUUUAACAUAAAUAAACAAAUCGUAUCAGUGUUUGUGAAUAAAAUACAAAAAUGAUUGUUAAUGAUUGGUGCUCUUAAAGUGAGCUUAAAAUUUAUCCAAGACGUAUAUCCAAAUUUGUCCUGUAGUAAUAGAUUAAUAUUCAUAGAUUGUUGGUGUUUAAAGAUCUGAAGUGUGAGUAGAAUGUAUUCAGCUGUUUAACAUGUAGUUUAGAUAUUCAAAAGUAUGCAUGUAGAAUUUAAAGAAUAUGUUAAAAAUUAUUAAUUUUAAUAUUUUGUUUGGAAAAGCAUGUUAUAAUAUAAUGUUUUCACUAUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1340	1525	1637	1696	1783	1817	2064	2139	2230
Modification Positions	Y	Y	m6A	m6A	Y	m6A	m6A	m6A	Y
Genomic Coordinates	9:100572562:+	9:100576586:+	9:100576698:+	9:100576757:+	9:100576844:+	9:100576878:+	9:100577125:+	9:100577200:+	9:100577291:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq eGNFqdoGxzRm	BtsJQJ3DteUq eGNFqdoGxzRm	5aTkEfEpX8Xm msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq eGNFqdoGxzRm	Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL KENzb7mwdBd9 Lny8GcCeVGc9 BtsJQJ3DteUq eGNFqdoGxzRm	BtsJQJ3DteUq eGNFqdoGxzRm	msuJfBpJvM5H BkoLW2CBToyL Lny8GcCeVGc9 BtsJQJ3DteUq eGNFqdoGxzRm	4HMi5ykupT9V 5aTkEfEpX8Xm msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq eGNFqdoGxzRm kx7BHU7ZycYE iezFbUdmY3A6 JkWoGWVwjNda	BtsJQJ3DteUq eGNFqdoGxzRm kx7BHU7ZycYE iezFbUdmY3A6 JkWoGWVwjNda	BtsJQJ3DteUq eGNFqdoGxzRm kx7BHU7ZycYE iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp