General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000476905
Gene ID:	ENSG00000117155
Gene Name:	SSX2IP
Sequence (UNICHARACTER ENCODING)	AACAGGUGCCGCAGCCGCAGCUGCGCCCGCAGCGCGCGCGGACCGCAGGGAUAAGGUCUUCUUUUUCUCCGGGUUUUUUUGGAGAUGAGGAAAGUGAGGCCCAAAGAAGAUUUAUGUUCAGGACCAUUUAGUCUGAGAUGCCUACAUAGAAGAGUGACAGCAGCUAGACUAAAUGUUUAACUGCUGAACUAGUUCCUCAGGUAUCCUGGCUCUAGAGAUUGCUAUGGGAGAUUGGAUGACUGUUACAGAUCCAGAAAGCAAAACUAUCUCUCAAUAUACCUCAGAAACAAAGAUGUCUCCAUCAAGUUUAUACUCACAGCAAGUGCUAUGUUCUUCAAUACCUUUAUCGAAAAAUGUGCACAGUUUUUUCAGUGCCUUCUGCACAGAAGAUAAUAUUGAACAGAGUAUCUCAUAUCUUGAUCAGGAAUUGACUACUUUUGGUUUUCCUUCAUUAUAUGAAGAAUCCAAAGGUAAAGAGACAAAGAGAGAGUUAAAUAUAGUAGCUGUACUAAAUUGUAUGAAUGAGCUGCUUGUGCUUCAGCGGAAGAACCUUCUAGCUCAGGAAAAUGUGGAGACACAGAAUUUGAAGCUGGGAAGUGAUAUGGACCAUCUACAGAGCUGCUACUCAAAACUUAAGGAACAACUGGAAACCUCCAGGAGGGAAAUGAUUGGGCUUCAGGAAAGAGACAGACAGUUACAAUGUAAGAACAGGAAUUUGCAUCAGCUACUAAAGAAUGAGAAAGAUGAGGUGCAAAAAUUACAAAAUAUCAUUGCAAGUCGAGCUACUCAGUAUAAUCAUGAUAUGAAGAGAAAAGAGCGUGAAUAUAAUAAACUGAAGGAACGUCUACAUCAACUUGUUAUGAACAAGAAAGAUAAGAAAAUAGCUAUGGACAUUUUGAAUUAUGUCGGGAGAGCUGAUGGAAAAAGAGGCUCCUGGAGGACUGGUAAAACUGAAGCCAGGAAUGAAGAUGAAAUGUAUAAAAUUCUCUUGAAUGAUUAUGAAUAUCGUCAGAAACAAAUCCUAAUGGAAAAUGCAGAACUUAAGAAGGUUCUUCAACAAAUGAAAAAGGAAAUGAUUUCUCUUCUUUCUCCCCAAAAGAAGAAACCUAGAGAAAGAGUAGAUGAUAGUACAGGAACUGUUAUUUCCGAUGUUGAAGAAGAUGCCGGGGAACUAAGCAGAGAGAGUAUGUGGGACCUUUCCUGUGAAACUGUGAGAGAGCAGCUUACAAACAGCAUCAGAAAACAGUGGAGAAUUUUGAAAAGUCAUGUAGAAAAGCUUGAUAACCAAGUUUCAAAGGUACACCUGGAAGGUUUUAAUGAUGAAGAUGUAAUCUCACGACAAGACCAUGAACAAGAAACUGAAAAACUCGAGUUAGAAAUUCAGCAGUGUAAAGAAAUGAUUAAAACUCAGCAACAGCUUUUACAGCAGCAGCUCGCUACUGCAUAUGAUGAUGAUACCACUUCACUAUUACGAGACUGUUAUUUGUUGGAAGAAAAGGAACGUCUCAAAGAAGAAUGGUCCCUUUUUAAAGAGCAGAAAAAGAAUUUUGAGAGGGAGAGACGAAGCUPUACAGAAGCCGCUAUUCGCCUGGGAUUGGAGAUUGGCUUUCUCCUGCUAAGUGUUUUACACAAGAAAUCUCUUUUGGGUAUCCAUCAUUCAUCCACGGUCAGUAGGUGUGGUGUCAGAAGACAGUGCAACCAAGACUAUAUUUGCUGUUUAAAAAAGAAAGGCAUUUGAAGAAGAAAGAGCCAGUUGGUUAAAGCAGCAGUUUCUAAAUAUGACUACCUUUGACCACCAGAACUCAGAAAAUGUGAAACUUUUCAGUGCCUUCUCAGGAAGUUCUGAUUGGGACAAUCUUAUAGUGCACUCGAGGCAGCCGCAAAAGAAGCCUCACAGUGUGUCUAAUGGGUCUCCAGUUUGCAUGUCUAAACUUACUAAAUCUCUUCCUGCUUCACCUUCCACUUCAGACUUUUGCCAGACACGUUCCUGCAUAUCUGAACAUAGUUCAAUCAAUGUACUGAAUAUAACUGCUGAAGAAAUUAAЖCCAAAUCAGGUUGGAGGAGAAUGUACAAAUCAAAAAUGGAGUGUGGCAUCAAGACCUGGAUCACAGGAAGGUUGCUAUAGUGGAUGCUCCUUGAGCUACACAAAUUCUCAUGUAGAAAAAGAUGACUUACCUUAGACAUGUGGЖCUGGAAUUUUUUUCAUUAAUGUGUUCAUCAAGUUUCACAUCUAAGUUGAAACAGGGUGUGUCAUAAAGUCAGUUAUCUCUAAU
Sequence (SHORT NAMES ENCODING)	AACAGGUGCCGCAGCCGCAGCUGCGCCCGCAGCGCGCGCGGACCGCAGGGAUAAGGUCUUCUUUUUCUCCGGGUUUUUUUGGAGAUGAGGAAAGUGAGGCCCAAAGAAGAUUUAUGUUCAGGACCAUUUAGUCUGAGAUGCCUACAUAGAAGAGUGACAGCAGCUAGACUAAAUGUUUAACUGCUGAACUAGUUCCUCAGGUAUCCUGGCUCUAGAGAUUGCUAUGGGAGAUUGGAUGACUGUUACAGAUCCAGAAAGCAAAACUAUCUCUCAAUAUACCUCAGAAACAAAGAUGUCUCCAUCAAGUUUAUACUCACAGCAAGUGCUAUGUUCUUCAAUACCUUUAUCGAAAAAUGUGCACAGUUUUUUCAGUGCCUUCUGCACAGAAGAUAAUAUUGAACAGAGUAUCUCAUAUCUUGAUCAGGAAUUGACUACUUUUGGUUUUCCUUCAUUAUAUGAAGAAUCCAAAGGUAAAGAGACAAAGAGAGAGUUAAAUAUAGUAGCUGUACUAAAUUGUAUGAAUGAGCUGCUUGUGCUUCAGCGGAAGAACCUUCUAGCUCAGGAAAAUGUGGAGACACAGAAUUUGAAGCUGGGAAGUGAUAUGGACCAUCUACAGAGCUGCUACUCAAAACUUAAGGAACAACUGGAAACCUCCAGGAGGGAAAUGAUUGGGCUUCAGGAAAGAGACAGACAGUUACAAUGUAAGAACAGGAAUUUGCAUCAGCUACUAAAGAAUGAGAAAGAUGAGGUGCAAAAAUUACAAAAUAUCAUUGCAAGUCGAGCUACUCAGUAUAAUCAUGAUAUGAAGAGAAAAGAGCGUGAAUAUAAUAAACUGAAGGAACGUCUACAUCAACUUGUUAUGAACAAGAAAGAUAAGAAAAUAGCUAUGGACAUUUUGAAUUAUGUCGGGAGAGCUGAUGGAAAAAGAGGCUCCUGGAGGACUGGUAAAACUGAAGCCAGGAAUGAAGAUGAAAUGUAUAAAAUUCUCUUGAAUGAUUAUGAAUAUCGUCAGAAACAAAUCCUAAUGGAAAAUGCAGAACUUAAGAAGGUUCUUCAACAAAUGAAAAAGGAAAUGAUUUCUCUUCUUUCUCCCCAAAAGAAGAAACCUAGAGAAAGAGUAGAUGAUAGUACAGGAACUGUUAUUUCCGAUGUUGAAGAAGAUGCCGGGGAACUAAGCAGAGAGAGUAUGUGGGACCUUUCCUGUGAAACUGUGAGAGAGCAGCUUACAAACAGCAUCAGAAAACAGUGGAGAAUUUUGAAAAGUCAUGUAGAAAAGCUUGAUAACCAAGUUUCAAAGGUACACCUGGAAGGUUUUAAUGAUGAAGAUGUAAUCUCACGACAAGACCAUGAACAAGAAACUGAAAAACUCGAGUUAGAAAUUCAGCAGUGUAAAGAAAUGAUUAAAACUCAGCAACAGCUUUUACAGCAGCAGCUCGCUACUGCAUAUGAUGAUGAUACCACUUCACUAUUACGAGACUGUUAUUUGUUGGAAGAAAAGGAACGUCUCAAAGAAGAAUGGUCCCUUUUUAAAGAGCAGAAAAAGAAUUUUGAGAGGGAGAGACGAAGCUYUACAGAAGCCGCUAUUCGCCUGGGAUUGGAGAUUGGCUUUCUCCUGCUAAGUGUUUUACACAAGAAAUCUCUUUUGGGUAUCCAUCAUUCAUCCACGGUCAGUAGGUGUGGUGUCAGAAGACAGUGCAACCAAGACUAUAUUUGCUGUUUAAAAAAGAAAGGCAUUUGAAGAAGAAAGAGCCAGUUGGUUAAAGCAGCAGUUUCUAAAUAUGACUACCUUUGACCACCAGAACUCAGAAAAUGUGAAACUUUUCAGUGCCUUCUCAGGAAGUUCUGAUUGGGACAAUCUUAUAGUGCACUCGAGGCAGCCGCAAAAGAAGCCUCACAGUGUGUCUAAUGGGUCUCCAGUUUGCAUGUCUAAACUUACUAAAUCUCUUCCUGCUUCACCUUCCACUUCAGACUUUUGCCAGACACGUUCCUGCAUAUCUGAACAUAGUUCAAUCAAUGUACUGAAUAUAACUGCUGAAGAAAUUAAm6ACCAAAUCAGGUUGGAGGAGAAUGUACAAAUCAAAAAUGGAGUGUGGCAUCAAGACCUGGAUCACAGGAAGGUUGCUAUAGUGGAUGCUCCUUGAGCUACACAAAUUCUCAUGUAGAAAAAGAUGACUUACCUUAGACAUGUGGm6ACUGGAAUUUUUUUCAUUAAUGUGUUCAUCAAGUUUCACAUCUAAGUUGAAACAGGGUGUGUCAUAAAGUCAGUUAUCUCUAAU
Sequence (MODOMICS CODE ENCODING)	AACAGGUGCCGCAGCCGCAGCUGCGCCCGCAGCGCGCGCGGACCGCAGGGAUAAGGUCUUCUUUUUCUCCGGGUUUUUUUGGAGAUGAGGAAAGUGAGGCCCAAAGAAGAUUUAUGUUCAGGACCAUUUAGUCUGAGAUGCCUACAUAGAAGAGUGACAGCAGCUAGACUAAAUGUUUAACUGCUGAACUAGUUCCUCAGGUAUCCUGGCUCUAGAGAUUGCUAUGGGAGAUUGGAUGACUGUUACAGAUCCAGAAAGCAAAACUAUCUCUCAAUAUACCUCAGAAACAAAGAUGUCUCCAUCAAGUUUAUACUCACAGCAAGUGCUAUGUUCUUCAAUACCUUUAUCGAAAAAUGUGCACAGUUUUUUCAGUGCCUUCUGCACAGAAGAUAAUAUUGAACAGAGUAUCUCAUAUCUUGAUCAGGAAUUGACUACUUUUGGUUUUCCUUCAUUAUAUGAAGAAUCCAAAGGUAAAGAGACAAAGAGAGAGUUAAAUAUAGUAGCUGUACUAAAUUGUAUGAAUGAGCUGCUUGUGCUUCAGCGGAAGAACCUUCUAGCUCAGGAAAAUGUGGAGACACAGAAUUUGAAGCUGGGAAGUGAUAUGGACCAUCUACAGAGCUGCUACUCAAAACUUAAGGAACAACUGGAAACCUCCAGGAGGGAAAUGAUUGGGCUUCAGGAAAGAGACAGACAGUUACAAUGUAAGAACAGGAAUUUGCAUCAGCUACUAAAGAAUGAGAAAGAUGAGGUGCAAAAAUUACAAAAUAUCAUUGCAAGUCGAGCUACUCAGUAUAAUCAUGAUAUGAAGAGAAAAGAGCGUGAAUAUAAUAAACUGAAGGAACGUCUACAUCAACUUGUUAUGAACAAGAAAGAUAAGAAAAUAGCUAUGGACAUUUUGAAUUAUGUCGGGAGAGCUGAUGGAAAAAGAGGCUCCUGGAGGACUGGUAAAACUGAAGCCAGGAAUGAAGAUGAAAUGUAUAAAAUUCUCUUGAAUGAUUAUGAAUAUCGUCAGAAACAAAUCCUAAUGGAAAAUGCAGAACUUAAGAAGGUUCUUCAACAAAUGAAAAAGGAAAUGAUUUCUCUUCUUUCUCCCCAAAAGAAGAAACCUAGAGAAAGAGUAGAUGAUAGUACAGGAACUGUUAUUUCCGAUGUUGAAGAAGAUGCCGGGGAACUAAGCAGAGAGAGUAUGUGGGACCUUUCCUGUGAAACUGUGAGAGAGCAGCUUACAAACAGCAUCAGAAAACAGUGGAGAAUUUUGAAAAGUCAUGUAGAAAAGCUUGAUAACCAAGUUUCAAAGGUACACCUGGAAGGUUUUAAUGAUGAAGAUGUAAUCUCACGACAAGACCAUGAACAAGAAACUGAAAAACUCGAGUUAGAAAUUCAGCAGUGUAAAGAAAUGAUUAAAACUCAGCAACAGCUUUUACAGCAGCAGCUCGCUACUGCAUAUGAUGAUGAUACCACUUCACUAUUACGAGACUGUUAUUUGUUGGAAGAAAAGGAACGUCUCAAAGAAGAAUGGUCCCUUUUUAAAGAGCAGAAAAAGAAUUUUGAGAGGGAGAGACGAAGCU2000000009UUACAGAAGCCGCUAUUCGCCUGGGAUUGGAGAUUGGCUUUCUCCUGCUAAGUGUUUUACACAAGAAAUCUCUUUUGGGUAUCCAUCAUUCAUCCACGGUCAGUAGGUGUGGUGUCAGAAGACAGUGCAACCAAGACUAUAUUUGCUGUUUAAAAAAGAAAGGCAUUUGAAGAAGAAAGAGCCAGUUGGUUAAAGCAGCAGUUUCUAAAUAUGACUACCUUUGACCACCAGAACUCAGAAAAUGUGAAACUUUUCAGUGCCUUCUCAGGAAGUUCUGAUUGGGACAAUCUUAUAGUGCACUCGAGGCAGCCGCAAAAGAAGCCUCACAGUGUGUCUAAUGGGUCUCCAGUUUGCAUGUCUAAACUUACUAAAUCUCUUCCUGCUUCACCUUCCACUUCAGACUUUUGCCAGACACGUUCCUGCAUAUCUGAACAUAGUUCAAUCAAUGUACUGAAUAUAACUGCUGAAGAAAUUAA2000000006ACCAAAUCAGGUUGGAGGAGAAUGUACAAAUCAAAAAUGGAGUGUGGCAUCAAGACCUGGAUCACAGGAAGGUUGCUAUAGUGGAUGCUCCUUGAGCUACACAAAUUCUCAUGUAGAAAAAGAUGACUUACCUUAGACAUGUGG2000000006ACUGGAAUUUUUUUCAUUAAUGUGUUCAUCAAGUUUCACAUCUAAGUUGAAACAGGGUGUGUCAUAAAGUCAGUUAUCUCUAAU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1569	2045	2189
Modification Positions	Y	m6A	m6A
Genomic Coordinates	1:84655863:-	1:84647568:-	1:84647424:-
Level of Experimental Evidence	3	3	3
Level of Experimental Reliability	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq dknfVe6BK8aP	BtsJQJ3DteUq dknfVe6BK8aP Mk6ShCGm6RBJ	4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BkoLW2CBToyL BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP Mk6ShCGm6RBJ JkWoGWVwjNda