General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000373826
Gene ID:	ENSG00000188060
Gene Name:	RAB42
Sequence (UNICHARACTER ENCODING)	AAGAAAUGAGUGAGGUGGAUGCUUCAGCGCUGUUAGUCUCCUCCCCAUGCCCCUCCUCACUUCAUCUAGUUUAGUCCCUUUAUCCUGUGAAGUAGGGGUCAUCAUUAGCCCCCUUUUACAGAGGAGAGAAUUGAGGCUUCGAGAGAGAGAAACUUGGCCAGGAGUUUCCACUCGGUCCGACGCCCUCGGUGCCCCGCCGGGUGCAUCACCAGGUCCUUUUACCGGAAUGUGGUGGGUGUCCUGCUGGUCUUUGAUGUGACAAACAGGAAGUCCUUUGAACACAUCCAAGACUGGCACCAGGAGGUCAUGGCCACUCAGGGCCCGGACAAGGUCAUCUUCCUGCUGGUUGGCCACAAGAGUGACCUGCAGAGCACCCGCUGUGUCUCAGCCCAGGAGGCCGAGGAGCUAGCUGCCUCCCUGGGCAUGGCCUUCGUGGAGACCUCGGUUAAAAACAACUGCAAUGUGGЖCCUGGCCUUUGACACCCUCGCUGAUGCUAUCCAGCAGGCCCUGCAGCAGGGGGACAUCAAGCUAGAAGAGGGCUGGGGGGGUGUCCGGCUCAUCCACAAGACCCAAAUCCCCAGGUCCCCCAGCAGGAAGCAGCACUCAGGCCCAUGCCAGUGUUGЖCUCUAGGAGAGAAAGGGUUAAAGCAGUCCCAGCCUUAGCCCACCUGGUGGGAUGGGGAGUGUUAAUAUCUCUCUGGAGGЖCAAAUGACAGAAGGGUUCAUAUAAACAGUAUCCUGACACAGUCAUGCUUCCUGGAUUUUGGAGUCGAGGCUUUCUACAGAAAAGAAAGUUCUGAUGGCCAGGCAUGGUGGCUCACGCCUGUAAUCCUAGCAUUUUUGGAGGCCAAGGЖCAGUGGAUCACCUGAGGUCAGGGGUUCGAGACCAGCCUGGCCAACAUGGUGAAACCCUGUCUCUACUAAAAAUACAAAAAUUAGCCAGGCGUGGUGGUGCAUGCCUGUAAUCCCAGUUACUCCAGAGGCUAAGGCAGGAGAAUUGCUUGAACCUGGGAGGCAGAGAUUGCAGUGAGCCAAGACUGCGCCACUGCACUCCAGCCUGGGCAACAGAGUGAGACUCUGUUUCAAAAAAAAAAAAGAAAAGAAAAGAAAGGCCUGAGAGACCAGAUGUGCAACUUCCUGUCCUUGAGCCUCAGUGUCCCUAUCUAUCGAUGGGGCUCAUAAAAGAUCCCACCUUGAAGGGAGGUGGUGACCACAAAUGAGЖCAGUGGЖCAGGAUGUGCUCACCCAGAGCCUGCCGCGCUGUGAAUUGAAUGACAAAAGCUCUCAUUCCCACUCCCUUUUUCUUGGCUGCGAUGUGGCCACUCUGGCAGCAUUCCUGGGCUCAGACACUGAGAAGCCAGCGUCAGGAAGCUGAUGCAUGGGCAAAGGCAGGUGCGGGGAAUUCCAGGGGGAGCUUGGCUUGGAGGCUUCUUAUGUCCUCAGGCUAAAAUGЖUUCUGGGCAUGGGAUUAAUAUGUGACGUCAAACCCAGGGUUGCUGGCCAAUGCCCCCCCGACCAGGCCCAGGGGCUGAAAAAUGGЖUGUUGGAGGCUGGGAUGAЖCAUGAAUGUGUAGCAACUAUGUUGGGCACACAGUGGCCACUGUGAUGAGCCACCAAGAUCCCCCUUUCUGGCUGGGGAACCCAUCAACCCUCUCCCCAGCUGCUGGAGUGCCACUGGAUGAUGGЖCUUCAGCUUGCCCCACUCUCUGGGAAAGGCCCUCCCUUCAGGGCAGCUUGUAUCCAAAGUUCAUCUCCUGGGGGGCCUUAAAGGЖCUCCCUCUUGCCCCAGCUCUGGЖCAACUCUGAAAGUCAAAACCAACUUUAUCAGUCUCUGUGGGCUUCAUUGAGGЖCACUGUUGUGACAUCAUAGCCAAGUUAUCCCCUUGCCCAAUCCUGCUUCCUUUUCUUCCCCAAACAGGUAUCCAUUUCAAGAAUAUCCCCUAAUAAACAUCUGCACACUCA
Sequence (SHORT NAMES ENCODING)	AAGAAAUGAGUGAGGUGGAUGCUUCAGCGCUGUUAGUCUCCUCCCCAUGCCCCUCCUCACUUCAUCUAGUUUAGUCCCUUUAUCCUGUGAAGUAGGGGUCAUCAUUAGCCCCCUUUUACAGAGGAGAGAAUUGAGGCUUCGAGAGAGAGAAACUUGGCCAGGAGUUUCCACUCGGUCCGACGCCCUCGGUGCCCCGCCGGGUGCAUCACCAGGUCCUUUUACCGGAAUGUGGUGGGUGUCCUGCUGGUCUUUGAUGUGACAAACAGGAAGUCCUUUGAACACAUCCAAGACUGGCACCAGGAGGUCAUGGCCACUCAGGGCCCGGACAAGGUCAUCUUCCUGCUGGUUGGCCACAAGAGUGACCUGCAGAGCACCCGCUGUGUCUCAGCCCAGGAGGCCGAGGAGCUAGCUGCCUCCCUGGGCAUGGCCUUCGUGGAGACCUCGGUUAAAAACAACUGCAAUGUGGm6ACCUGGCCUUUGACACCCUCGCUGAUGCUAUCCAGCAGGCCCUGCAGCAGGGGGACAUCAAGCUAGAAGAGGGCUGGGGGGGUGUCCGGCUCAUCCACAAGACCCAAAUCCCCAGGUCCCCCAGCAGGAAGCAGCACUCAGGCCCAUGCCAGUGUUGm6ACUCUAGGAGAGAAAGGGUUAAAGCAGUCCCAGCCUUAGCCCACCUGGUGGGAUGGGGAGUGUUAAUAUCUCUCUGGAGGm6ACAAAUGACAGAAGGGUUCAUAUAAACAGUAUCCUGACACAGUCAUGCUUCCUGGAUUUUGGAGUCGAGGCUUUCUACAGAAAAGAAAGUUCUGAUGGCCAGGCAUGGUGGCUCACGCCUGUAAUCCUAGCAUUUUUGGAGGCCAAGGm6ACAGUGGAUCACCUGAGGUCAGGGGUUCGAGACCAGCCUGGCCAACAUGGUGAAACCCUGUCUCUACUAAAAAUACAAAAAUUAGCCAGGCGUGGUGGUGCAUGCCUGUAAUCCCAGUUACUCCAGAGGCUAAGGCAGGAGAAUUGCUUGAACCUGGGAGGCAGAGAUUGCAGUGAGCCAAGACUGCGCCACUGCACUCCAGCCUGGGCAACAGAGUGAGACUCUGUUUCAAAAAAAAAAAAGAAAAGAAAAGAAAGGCCUGAGAGACCAGAUGUGCAACUUCCUGUCCUUGAGCCUCAGUGUCCCUAUCUAUCGAUGGGGCUCAUAAAAGAUCCCACCUUGAAGGGAGGUGGUGACCACAAAUGAGm6ACAGUGGm6ACAGGAUGUGCUCACCCAGAGCCUGCCGCGCUGUGAAUUGAAUGACAAAAGCUCUCAUUCCCACUCCCUUUUUCUUGGCUGCGAUGUGGCCACUCUGGCAGCAUUCCUGGGCUCAGACACUGAGAAGCCAGCGUCAGGAAGCUGAUGCAUGGGCAAAGGCAGGUGCGGGGAAUUCCAGGGGGAGCUUGGCUUGGAGGCUUCUUAUGUCCUCAGGCUAAAAUGm6AUUCUGGGCAUGGGAUUAAUAUGUGACGUCAAACCCAGGGUUGCUGGCCAAUGCCCCCCCGACCAGGCCCAGGGGCUGAAAAAUGGm6AUGUUGGAGGCUGGGAUGAm6ACAUGAAUGUGUAGCAACUAUGUUGGGCACACAGUGGCCACUGUGAUGAGCCACCAAGAUCCCCCUUUCUGGCUGGGGAACCCAUCAACCCUCUCCCCAGCUGCUGGAGUGCCACUGGAUGAUGGm6ACUUCAGCUUGCCCCACUCUCUGGGAAAGGCCCUCCCUUCAGGGCAGCUUGUAUCCAAAGUUCAUCUCCUGGGGGGCCUUAAAGGm6ACUCCCUCUUGCCCCAGCUCUGGm6ACAACUCUGAAAGUCAAAACCAACUUUAUCAGUCUCUGUGGGCUUCAUUGAGGm6ACACUGUUGUGACAUCAUAGCCAAGUUAUCCCCUUGCCCAAUCCUGCUUCCUUUUCUUCCCCAAACAGGUAUCCAUUUCAAGAAUAUCCCCUAAUAAACAUCUGCACACUCA
Sequence (MODOMICS CODE ENCODING)	AAGAAAUGAGUGAGGUGGAUGCUUCAGCGCUGUUAGUCUCCUCCCCAUGCCCCUCCUCACUUCAUCUAGUUUAGUCCCUUUAUCCUGUGAAGUAGGGGUCAUCAUUAGCCCCCUUUUACAGAGGAGAGAAUUGAGGCUUCGAGAGAGAGAAACUUGGCCAGGAGUUUCCACUCGGUCCGACGCCCUCGGUGCCCCGCCGGGUGCAUCACCAGGUCCUUUUACCGGAAUGUGGUGGGUGUCCUGCUGGUCUUUGAUGUGACAAACAGGAAGUCCUUUGAACACAUCCAAGACUGGCACCAGGAGGUCAUGGCCACUCAGGGCCCGGACAAGGUCAUCUUCCUGCUGGUUGGCCACAAGAGUGACCUGCAGAGCACCCGCUGUGUCUCAGCCCAGGAGGCCGAGGAGCUAGCUGCCUCCCUGGGCAUGGCCUUCGUGGAGACCUCGGUUAAAAACAACUGCAAUGUGG2000000006ACCUGGCCUUUGACACCCUCGCUGAUGCUAUCCAGCAGGCCCUGCAGCAGGGGGACAUCAAGCUAGAAGAGGGCUGGGGGGGUGUCCGGCUCAUCCACAAGACCCAAAUCCCCAGGUCCCCCAGCAGGAAGCAGCACUCAGGCCCAUGCCAGUGUUG2000000006ACUCUAGGAGAGAAAGGGUUAAAGCAGUCCCAGCCUUAGCCCACCUGGUGGGAUGGGGAGUGUUAAUAUCUCUCUGGAGG2000000006ACAAAUGACAGAAGGGUUCAUAUAAACAGUAUCCUGACACAGUCAUGCUUCCUGGAUUUUGGAGUCGAGGCUUUCUACAGAAAAGAAAGUUCUGAUGGCCAGGCAUGGUGGCUCACGCCUGUAAUCCUAGCAUUUUUGGAGGCCAAGG2000000006ACAGUGGAUCACCUGAGGUCAGGGGUUCGAGACCAGCCUGGCCAACAUGGUGAAACCCUGUCUCUACUAAAAAUACAAAAAUUAGCCAGGCGUGGUGGUGCAUGCCUGUAAUCCCAGUUACUCCAGAGGCUAAGGCAGGAGAAUUGCUUGAACCUGGGAGGCAGAGAUUGCAGUGAGCCAAGACUGCGCCACUGCACUCCAGCCUGGGCAACAGAGUGAGACUCUGUUUCAAAAAAAAAAAAGAAAAGAAAAGAAAGGCCUGAGAGACCAGAUGUGCAACUUCCUGUCCUUGAGCCUCAGUGUCCCUAUCUAUCGAUGGGGCUCAUAAAAGAUCCCACCUUGAAGGGAGGUGGUGACCACAAAUGAG2000000006ACAGUGG2000000006ACAGGAUGUGCUCACCCAGAGCCUGCCGCGCUGUGAAUUGAAUGACAAAAGCUCUCAUUCCCACUCCCUUUUUCUUGGCUGCGAUGUGGCCACUCUGGCAGCAUUCCUGGGCUCAGACACUGAGAAGCCAGCGUCAGGAAGCUGAUGCAUGGGCAAAGGCAGGUGCGGGGAAUUCCAGGGGGAGCUUGGCUUGGAGGCUUCUUAUGUCCUCAGGCUAAAAUG2000000006AUUCUGGGCAUGGGAUUAAUAUGUGACGUCAAACCCAGGGUUGCUGGCCAAUGCCCCCCCGACCAGGCCCAGGGGCUGAAAAAUGG2000000006AUGUUGGAGGCUGGGAUGA2000000006ACAUGAAUGUGUAGCAACUAUGUUGGGCACACAGUGGCCACUGUGAUGAGCCACCAAGAUCCCCCUUUCUGGCUGGGGAACCCAUCAACCCUCUCCCCAGCUGCUGGAGUGCCACUGGAUGAUGG2000000006ACUUCAGCUUGCCCCACUCUCUGGGAAAGGCCCUCCCUUCAGGGCAGCUUGUAUCCAAAGUUCAUCUCCUGGGGGGCCUUAAAGG2000000006ACUCCCUCUUGCCCCAGCUCUGG2000000006ACAACUCUGAAAGUCAAAACCAACUUUAUCAGUCUCUGUGGGCUUCAUUGAGG2000000006ACACUGUUGUGACAUCAUAGCCAAGUUAUCCCCUUGCCCAAUCCUGCUUCCUUUUCUUCCCCAAACAGGUAUCCAUUUCAAGAAUAUCCCCUAAUAAACAUCUGCACACUCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	467	624	704	852	1219	1226	1448	1534	1553	1678	1763	1786	1839
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	1:28593960:+	1:28594117:+	1:28594197:+	1:28594345:+	1:28594712:+	1:28594719:+	1:28594941:+	1:28595027:+	1:28595046:+	1:28595171:+	1:28595256:+	1:28595279:+	1:28595332:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn aJksAshEgQ8U Lny8GcCeVGc9	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn	6UuHp6YApVKv jNkxUQNx8GRd nGifePrmgHfe QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn Lny8GcCeVGc9	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	3TeAZFYFxgvp 6UuHp6YApVKv Ap2q43bQLNek jNkxUQNx8GRd nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek jNkxUQNx8GRd NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn Lny8GcCeVGc9	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn Lny8GcCeVGc9	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn KENzb7mwdBd9 Lny8GcCeVGc9 UKen6WEino9G	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn KENzb7mwdBd9 Lny8GcCeVGc9