General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000689916
Gene ID:	ENSG00000233621
Gene Name:	ZC3H12A-DT
Sequence (UNICHARACTER ENCODING)	AAGCGGGGGUCGGAGCCUCAAGGCUGCGGCGGCGACGAGCUCCGAGCGGGACACUGAACGGCCCGUAUGCGCAAGAUAAGCACGGЖCUGAAUCAGGGUGAGAACCUACUUCUUCAUAAAGAGAAUUUGGAGGGAGCUUUUUGUUCUGCGGGGACAACAUCUGGAUUUGAAUACAUCCAUGCUCAAAAGGAGAUUUCUCAUAAUGGЖCCCAACUGAAAGCACUCAGAGUACAAGGЖCCGGUGAGCUUUCAAAAGGAGACACUUCGGGAGACUCGCCAGGGGCCCUCGUAUCCCCGGCAGCGCGAGUUUUGGAGGUCAGUGGAGGGCUCUCGCAUCAUGCAUGUAЖCUUUCAUACUCAAAAЖCUUACCUUCAUCCUGCAUCCCUCACCCCCCUGCAGAAЖCUUGGGGCUUGAAUUCAUUUAAAAЖCAUUUGCGGUUUCAGAAGCCUUCUUUUUAUUAUGAAGCUGCCAAGGAGAUCUUAGAAUGAAAGGCAUUUUUAGAGAUGAGAAAGAAGGAAGCCAGGCCAAGGCUGGGCCGGCUCUCAGCCGUGGGUCUGUAAAGGUGЖCACGUGGGЖCAUGGCCACCUGCAGACCCUGCAGGCGGCUGGGCAGAGGCACCCACAGGGЖCCUGGGUUUGAAUCCCUGCUCUGCCAGUCAUUUCCACAGCGAUCUUGGGGGAAGUUGUGUAACCUCUGGGCCCUGCGACGCCCUUUCCUGGAGCCUGGAGCUGGAACGAAGCCCCUUGGAGCCCUGACAUCAGAGGUGACGUUAGUCUUCGCAGGCAAUGЖCUCGGCGGAAUGUGAUGCCACUCCCUAACCCGUGUCCGGЖCUGGCAGAGUGUGUGCCGCCUCCCACCAGGUGGUCUGGCUGCUUUGAUGGAUCUCCUAACUUCUCUGCACCCCAGAGCCCUCAGUGCUGGCCAGACCUUCACUCACUCCUGGGUGACAACCCCGUUCUCAGAUAGUGGGUCCCACAGGCUGGCCUGUGGCGCCCCCUGCUGGUGЖCUGCAGGGAGAAGGAUGCCCUAAGCCAAAGGAAGUCCUUCCUGGGGUCUAAUCUCUACCUUUUGCAUGAUGAGGCAGCUGAGGUGGCUCGCUUUCUCCUCCACCCCAGAAAAUAAAGUCAUAUGGAGUCCAA
Sequence (SHORT NAMES ENCODING)	AAGCGGGGGUCGGAGCCUCAAGGCUGCGGCGGCGACGAGCUCCGAGCGGGACACUGAACGGCCCGUAUGCGCAAGAUAAGCACGGm6ACUGAAUCAGGGUGAGAACCUACUUCUUCAUAAAGAGAAUUUGGAGGGAGCUUUUUGUUCUGCGGGGACAACAUCUGGAUUUGAAUACAUCCAUGCUCAAAAGGAGAUUUCUCAUAAUGGm6ACCCAACUGAAAGCACUCAGAGUACAAGGm6ACCGGUGAGCUUUCAAAAGGAGACACUUCGGGAGACUCGCCAGGGGCCCUCGUAUCCCCGGCAGCGCGAGUUUUGGAGGUCAGUGGAGGGCUCUCGCAUCAUGCAUGUAm6ACUUUCAUACUCAAAAm6ACUUACCUUCAUCCUGCAUCCCUCACCCCCCUGCAGAAm6ACUUGGGGCUUGAAUUCAUUUAAAAm6ACAUUUGCGGUUUCAGAAGCCUUCUUUUUAUUAUGAAGCUGCCAAGGAGAUCUUAGAAUGAAAGGCAUUUUUAGAGAUGAGAAAGAAGGAAGCCAGGCCAAGGCUGGGCCGGCUCUCAGCCGUGGGUCUGUAAAGGUGm6ACACGUGGGm6ACAUGGCCACCUGCAGACCCUGCAGGCGGCUGGGCAGAGGCACCCACAGGGm6ACCUGGGUUUGAAUCCCUGCUCUGCCAGUCAUUUCCACAGCGAUCUUGGGGGAAGUUGUGUAACCUCUGGGCCCUGCGACGCCCUUUCCUGGAGCCUGGAGCUGGAACGAAGCCCCUUGGAGCCCUGACAUCAGAGGUGACGUUAGUCUUCGCAGGCAAUGm6ACUCGGCGGAAUGUGAUGCCACUCCCUAACCCGUGUCCGGm6ACUGGCAGAGUGUGUGCCGCCUCCCACCAGGUGGUCUGGCUGCUUUGAUGGAUCUCCUAACUUCUCUGCACCCCAGAGCCCUCAGUGCUGGCCAGACCUUCACUCACUCCUGGGUGACAACCCCGUUCUCAGAUAGUGGGUCCCACAGGCUGGCCUGUGGCGCCCCCUGCUGGUGm6ACUGCAGGGAGAAGGAUGCCCUAAGCCAAAGGAAGUCCUUCCUGGGGUCUAAUCUCUACCUUUUGCAUGAUGAGGCAGCUGAGGUGGCUCGCUUUCUCCUCCACCCCAGAAAAUAAAGUCAUAUGGAGUCCAA
Sequence (MODOMICS CODE ENCODING)	AAGCGGGGGUCGGAGCCUCAAGGCUGCGGCGGCGACGAGCUCCGAGCGGGACACUGAACGGCCCGUAUGCGCAAGAUAAGCACGG2000000006ACUGAAUCAGGGUGAGAACCUACUUCUUCAUAAAGAGAAUUUGGAGGGAGCUUUUUGUUCUGCGGGGACAACAUCUGGAUUUGAAUACAUCCAUGCUCAAAAGGAGAUUUCUCAUAAUGG2000000006ACCCAACUGAAAGCACUCAGAGUACAAGG2000000006ACCGGUGAGCUUUCAAAAGGAGACACUUCGGGAGACUCGCCAGGGGCCCUCGUAUCCCCGGCAGCGCGAGUUUUGGAGGUCAGUGGAGGGCUCUCGCAUCAUGCAUGUA2000000006ACUUUCAUACUCAAAA2000000006ACUUACCUUCAUCCUGCAUCCCUCACCCCCCUGCAGAA2000000006ACUUGGGGCUUGAAUUCAUUUAAAA2000000006ACAUUUGCGGUUUCAGAAGCCUUCUUUUUAUUAUGAAGCUGCCAAGGAGAUCUUAGAAUGAAAGGCAUUUUUAGAGAUGAGAAAGAAGGAAGCCAGGCCAAGGCUGGGCCGGCUCUCAGCCGUGGGUCUGUAAAGGUG2000000006ACACGUGGG2000000006ACAUGGCCACCUGCAGACCCUGCAGGCGGCUGGGCAGAGGCACCCACAGGG2000000006ACCUGGGUUUGAAUCCCUGCUCUGCCAGUCAUUUCCACAGCGAUCUUGGGGGAAGUUGUGUAACCUCUGGGCCCUGCGACGCCCUUUCCUGGAGCCUGGAGCUGGAACGAAGCCCCUUGGAGCCCUGACAUCAGAGGUGACGUUAGUCUUCGCAGGCAAUG2000000006ACUCGGCGGAAUGUGAUGCCACUCCCUAACCCGUGUCCGG2000000006ACUGGCAGAGUGUGUGCCGCCUCCCACCAGGUGGUCUGGCUGCUUUGAUGGAUCUCCUAACUUCUCUGCACCCCAGAGCCCUCAGUGCUGGCCAGACCUUCACUCACUCCUGGGUGACAACCCCGUUCUCAGAUAGUGGGUCCCACAGGCUGGCCUGUGGCGCCCCCUGCUGGUG2000000006ACUGCAGGGAGAAGGAUGCCCUAAGCCAAAGGAAGUCCUUCCUGGGGUCUAAUCUCUACCUUUUGCAUGAUGAGGCAGCUGAGGUGGCUCGCUUUCUCCUCCACCCCAGAAAAUAAAGUCAUAUGGAGUCCAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	86	206	235	344	360	398	423	561	570	621	782	822	997
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	1:37474301:-	1:37455802:-	1:37455773:-	1:37455664:-	1:37455648:-	1:37455610:-	1:37455585:-	1:37455447:-	1:37455438:-	1:37455387:-	1:37455226:-	1:37455186:-	1:37455011:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	aivdrAsbdKEU Ap2q43bQLNek QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn	aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn	6AyXsheySjfx aivdrAsbdKEU gZuvgwMuBfgh QmcpiJ88DBDn QpiKdbVikVz2 WdHxkJGRmFxn	6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB WdHxkJGRmFxn Lny8GcCeVGc9	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh KRfQJWH4K5KH nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn Lny8GcCeVGc9	5FhTyQVy2tKW WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn	5FhTyQVy2tKW 6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh KRfQJWH4K5KH nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn	5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh KRfQJWH4K5KH nGifePrmgHfe NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn	3TeAZFYFxgvp aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn Lny8GcCeVGc9	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn Lny8GcCeVGc9	6AyXsheySjfx aivdrAsbdKEU gZuvgwMuBfgh QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn