General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000369124
Gene ID:	ENSG00000023902
Gene Name:	PLEKHO1
Sequence (UNICHARACTER ENCODING)	ACAGCGCACCGGGCCGGGGGAGCGGCCGCGCUGGGCCGGGCGGGCGGGUGGCGGGGGUGCGCUCGGGGACCCGGGCCGCGUGGGCGCCGGGAUGGAGGGCGCCAAGGGGCGGGGAGCGGGCGUGCGUGUGUGUGCGAGUGCGAAUGCGAGGGAGGCCGGCCUUGAGUGAAACCGGAGCUACAAAGAAGGGGAGAGUCCGGGAGCGGGAGGGCGCGAGGGAGGAGCGGCGGCGCCGGGGCAGCUCCGACGCCCUCCCGCGGGGAAGGAGCCCCCGCGGUGCCGCCGAGGCCCCGACGCGGGGCCGCCCCUCGGCUCGCCGCCCCGCGCCCGCGCCCGCUGGGAAUGAUGAAGAAGAACAAUUCCGCCAAGCGGGGACCUCAGGAUGGAAACCAGCAGCCUGCACCGCCCGAGAAGGUCGGCUGGGUCCGGAAAUUCUGCGGGAAAGGGAUUUUCAGGGAGAUUUGGAAAAACCGCUAUGUGGUGCUGAAAGGGGACCAGCUCUACAUCUCUGAGAAGGAGGUAAAAGAUGAGAAAAAUAUUCAAGAGGUAUUUGACCUGAGUGACUAUGAGAAGUGUGAAGAGCUCCGGAAGUCCAAGAGCAGGAGCAAGAAAAAUCAUAGCAAGUUUACUCUUGCCCACUCCAAACAGCCCGGUAACACGGCACCCAACCUGAUCUUCCUGGCAGUGAGUCCAGAAGAGAAGGAAUCGUGGAUCAAUGCCCUCAACUCUGCCAUCACCCGAGCCAAGAACCGUAUCUUGGAUGAGGUCACCGUUGAGGAGGACAGCUAUCUUGCCCAPCCCACUCGAGЖCAGGGCAAAAAUCCAGCACUCCCGCCGCCCCCCAACAAGGGGACACCUAAUGGCUGUGGCUUCCACCUCUACCUCGGAUGGGAUGCUGACCUUGGACUUGAUCCAAGAGGAAGЖCCCUUCCCCUGAGGAACCAACCUCUUGUGCUGAGAGCUUUCGGGUUGACCUGGЖCAAGUCUGUGGCCCAGCUGGCAGGGAGCCGGCGGAGAGCGGЖCUCAGACCGCAUCCAGCCCPCCGCAGACCGGGCAAGCAGUCUCUCCCGACCUUGGGAAAAAЖCAGACAAAGGGGCCACCUACACCCCCCAGGCACCCAAGAAGUUGACGCCCACAGAGAAAGGCCGCUGCGCCUCCCUGGAGGAGAUCCUAUCUCAGCGGGAUGCUGCCUCUGCCCGCACCCPCCAGCUGCGGGCUGAGGAACCCCCAACCCCUGCCCUCCCCAACCCGGGGCAGCUGUCCCGGAUCCAGGЖCCUGGUAGCAAGGAAACUGGAGGAGЖCUCAGGAGCUUCUGGCAGAGGUUCAGGGЖCUGGGAGAUGGGAAGCGAAAGGCCAAGGACCCCCCUCGGUCUCCGCCGGAUUCUGAGUCAGAGCAGCUGCUGCUGGAGACGGAACGGCUGCUGGGAGAGGCAUCAUCGAAUUGGAGCCAGGCAAAGAGGGUGCUGCAGGAGGUCAGGGAGCUGAGAGЖCCUGUACAGACAGAUGGЖCCUGCAGACCCCGGЖCUCCCACCUCAGACAGACCACCCCGCACAGUCAGUACCGGAAGAGCCUGAUGUGAGGGCAGGGUGGGGUCUGGAЖCUUGUCGGGUUGGЖCAGЖCUCUUAUCUCCGUGUUGCUGGAUAAAGCUUUUUUAUUUACCUCAAUCAAAAAAAGAAAACAAAAAUGAACUCAUUGCUCUUGCUGAUGCCUGACCCCACUACAACCCUUAUUGCCCCACCUACUUUCCAUAUGCCCCUCGUAUGCCCCUCAGGUUUGAGGAAGUGACCCCGCAGCAGUAGCAGGAAGUUUUUACCCAGCCAGAGAGAGAGAAGGCACGGUAAAGACACAGUCUGACCACUCCACACACCGCCCGCCCCCAAGACGGCACAGGGAGUCCACUGCUGCUCCCAAGGAUACAGUGGGCUUCUAAGCUUAGAGCGGGAGGGGGAUGAGGAUGUUUUCUGUUAUGUCCCACCCCAGGCCUUCAGUUUGAGGGUGAAGUUUCAGCUGCCCAACUCUAGUUGUAGGGAUGUGGAGGCCAGUGUCACCUGUCCGUGCACAUGGAAGUGAAAUUUAUCCCAGCCCUGAGGAGGAUUUGUGGAAUUAAAAUCUCCCCAGCCAGA
Sequence (SHORT NAMES ENCODING)	ACAGCGCACCGGGCCGGGGGAGCGGCCGCGCUGGGCCGGGCGGGCGGGUGGCGGGGGUGCGCUCGGGGACCCGGGCCGCGUGGGCGCCGGGAUGGAGGGCGCCAAGGGGCGGGGAGCGGGCGUGCGUGUGUGUGCGAGUGCGAAUGCGAGGGAGGCCGGCCUUGAGUGAAACCGGAGCUACAAAGAAGGGGAGAGUCCGGGAGCGGGAGGGCGCGAGGGAGGAGCGGCGGCGCCGGGGCAGCUCCGACGCCCUCCCGCGGGGAAGGAGCCCCCGCGGUGCCGCCGAGGCCCCGACGCGGGGCCGCCCCUCGGCUCGCCGCCCCGCGCCCGCGCCCGCUGGGAAUGAUGAAGAAGAACAAUUCCGCCAAGCGGGGACCUCAGGAUGGAAACCAGCAGCCUGCACCGCCCGAGAAGGUCGGCUGGGUCCGGAAAUUCUGCGGGAAAGGGAUUUUCAGGGAGAUUUGGAAAAACCGCUAUGUGGUGCUGAAAGGGGACCAGCUCUACAUCUCUGAGAAGGAGGUAAAAGAUGAGAAAAAUAUUCAAGAGGUAUUUGACCUGAGUGACUAUGAGAAGUGUGAAGAGCUCCGGAAGUCCAAGAGCAGGAGCAAGAAAAAUCAUAGCAAGUUUACUCUUGCCCACUCCAAACAGCCCGGUAACACGGCACCCAACCUGAUCUUCCUGGCAGUGAGUCCAGAAGAGAAGGAAUCGUGGAUCAAUGCCCUCAACUCUGCCAUCACCCGAGCCAAGAACCGUAUCUUGGAUGAGGUCACCGUUGAGGAGGACAGCUAUCUUGCCCAYCCCACUCGAGm6ACAGGGCAAAAAUCCAGCACUCCCGCCGCCCCCCAACAAGGGGACACCUAAUGGCUGUGGCUUCCACCUCUACCUCGGAUGGGAUGCUGACCUUGGACUUGAUCCAAGAGGAAGm6ACCCUUCCCCUGAGGAACCAACCUCUUGUGCUGAGAGCUUUCGGGUUGACCUGGm6ACAAGUCUGUGGCCCAGCUGGCAGGGAGCCGGCGGAGAGCGGm6ACUCAGACCGCAUCCAGCCCYCCGCAGACCGGGCAAGCAGUCUCUCCCGACCUUGGGAAAAAm6ACAGACAAAGGGGCCACCUACACCCCCCAGGCACCCAAGAAGUUGACGCCCACAGAGAAAGGCCGCUGCGCCUCCCUGGAGGAGAUCCUAUCUCAGCGGGAUGCUGCCUCUGCCCGCACCCYCCAGCUGCGGGCUGAGGAACCCCCAACCCCUGCCCUCCCCAACCCGGGGCAGCUGUCCCGGAUCCAGGm6ACCUGGUAGCAAGGAAACUGGAGGAGm6ACUCAGGAGCUUCUGGCAGAGGUUCAGGGm6ACUGGGAGAUGGGAAGCGAAAGGCCAAGGACCCCCCUCGGUCUCCGCCGGAUUCUGAGUCAGAGCAGCUGCUGCUGGAGACGGAACGGCUGCUGGGAGAGGCAUCAUCGAAUUGGAGCCAGGCAAAGAGGGUGCUGCAGGAGGUCAGGGAGCUGAGAGm6ACCUGUACAGACAGAUGGm6ACCUGCAGACCCCGGm6ACUCCCACCUCAGACAGACCACCCCGCACAGUCAGUACCGGAAGAGCCUGAUGUGAGGGCAGGGUGGGGUCUGGAm6ACUUGUCGGGUUGGm6ACAGm6ACUCUUAUCUCCGUGUUGCUGGAUAAAGCUUUUUUAUUUACCUCAAUCAAAAAAAGAAAACAAAAAUGAACUCAUUGCUCUUGCUGAUGCCUGACCCCACUACAACCCUUAUUGCCCCACCUACUUUCCAUAUGCCCCUCGUAUGCCCCUCAGGUUUGAGGAAGUGACCCCGCAGCAGUAGCAGGAAGUUUUUACCCAGCCAGAGAGAGAGAAGGCACGGUAAAGACACAGUCUGACCACUCCACACACCGCCCGCCCCCAAGACGGCACAGGGAGUCCACUGCUGCUCCCAAGGAUACAGUGGGCUUCUAAGCUUAGAGCGGGAGGGGGAUGAGGAUGUUUUCUGUUAUGUCCCACCCCAGGCCUUCAGUUUGAGGGUGAAGUUUCAGCUGCCCAACUCUAGUUGUAGGGAUGUGGAGGCCAGUGUCACCUGUCCGUGCACAUGGAAGUGAAAUUUAUCCCAGCCCUGAGGAGGAUUUGUGGAAUUAAAAUCUCCCCAGCCAGA
Sequence (MODOMICS CODE ENCODING)	ACAGCGCACCGGGCCGGGGGAGCGGCCGCGCUGGGCCGGGCGGGCGGGUGGCGGGGGUGCGCUCGGGGACCCGGGCCGCGUGGGCGCCGGGAUGGAGGGCGCCAAGGGGCGGGGAGCGGGCGUGCGUGUGUGUGCGAGUGCGAAUGCGAGGGAGGCCGGCCUUGAGUGAAACCGGAGCUACAAAGAAGGGGAGAGUCCGGGAGCGGGAGGGCGCGAGGGAGGAGCGGCGGCGCCGGGGCAGCUCCGACGCCCUCCCGCGGGGAAGGAGCCCCCGCGGUGCCGCCGAGGCCCCGACGCGGGGCCGCCCCUCGGCUCGCCGCCCCGCGCCCGCGCCCGCUGGGAAUGAUGAAGAAGAACAAUUCCGCCAAGCGGGGACCUCAGGAUGGAAACCAGCAGCCUGCACCGCCCGAGAAGGUCGGCUGGGUCCGGAAAUUCUGCGGGAAAGGGAUUUUCAGGGAGAUUUGGAAAAACCGCUAUGUGGUGCUGAAAGGGGACCAGCUCUACAUCUCUGAGAAGGAGGUAAAAGAUGAGAAAAAUAUUCAAGAGGUAUUUGACCUGAGUGACUAUGAGAAGUGUGAAGAGCUCCGGAAGUCCAAGAGCAGGAGCAAGAAAAAUCAUAGCAAGUUUACUCUUGCCCACUCCAAACAGCCCGGUAACACGGCACCCAACCUGAUCUUCCUGGCAGUGAGUCCAGAAGAGAAGGAAUCGUGGAUCAAUGCCCUCAACUCUGCCAUCACCCGAGCCAAGAACCGUAUCUUGGAUGAGGUCACCGUUGAGGAGGACAGCUAUCUUGCCCA2000000009UCCCACUCGAG2000000006ACAGGGCAAAAAUCCAGCACUCCCGCCGCCCCCCAACAAGGGGACACCUAAUGGCUGUGGCUUCCACCUCUACCUCGGAUGGGAUGCUGACCUUGGACUUGAUCCAAGAGGAAG2000000006ACCCUUCCCCUGAGGAACCAACCUCUUGUGCUGAGAGCUUUCGGGUUGACCUGG2000000006ACAAGUCUGUGGCCCAGCUGGCAGGGAGCCGGCGGAGAGCGG2000000006ACUCAGACCGCAUCCAGCCC2000000009UCCGCAGACCGGGCAAGCAGUCUCUCCCGACCUUGGGAAAAA2000000006ACAGACAAAGGGGCCACCUACACCCCCCAGGCACCCAAGAAGUUGACGCCCACAGAGAAAGGCCGCUGCGCCUCCCUGGAGGAGAUCCUAUCUCAGCGGGAUGCUGCCUCUGCCCGCACCC2000000009UCCAGCUGCGGGCUGAGGAACCCCCAACCCCUGCCCUCCCCAACCCGGGGCAGCUGUCCCGGAUCCAGG2000000006ACCUGGUAGCAAGGAAACUGGAGGAG2000000006ACUCAGGAGCUUCUGGCAGAGGUUCAGGG2000000006ACUGGGAGAUGGGAAGCGAAAGGCCAAGGACCCCCCUCGGUCUCCGCCGGAUUCUGAGUCAGAGCAGCUGCUGCUGGAGACGGAACGGCUGCUGGGAGAGGCAUCAUCGAAUUGGAGCCAGGCAAAGAGGGUGCUGCAGGAGGUCAGGGAGCUGAGAG2000000006ACCUGUACAGACAGAUGG2000000006ACCUGCAGACCCCGG2000000006ACUCCCACCUCAGACAGACCACCCCGCACAGUCAGUACCGGAAGAGCCUGAUGUGAGGGCAGGGUGGGGUCUGGA2000000006ACUUGUCGGGUUGG2000000006ACAG2000000006ACUCUUAUCUCCGUGUUGCUGGAUAAAGCUUUUUUAUUUACCUCAAUCAAAAAAAGAAAACAAAAAUGAACUCAUUGCUCUUGCUGAUGCCUGACCCCACUACAACCCUUAUUGCCCCACCUACUUUCCAUAUGCCCCUCGUAUGCCCCUCAGGUUUGAGGAAGUGACCCCGCAGCAGUAGCAGGAAGUUUUUACCCAGCCAGAGAGAGAGAAGGCACGGUAAAGACACAGUCUGACCACUCCACACACCGCCCGCCCCCAAGACGGCACAGGGAGUCCACUGCUGCUCCCAAGGAUACAGUGGGCUUCUAAGCUUAGAGCGGGAGGGGGAUGAGGAUGUUUUCUGUUAUGUCCCACCCCAGGCCUUCAGUUUGAGGGUGAAGUUUCAGCUGCCCAACUCUAGUUGUAGGGAUGUGGAGGCCAGUGUCACCUGUCCGUGCACAUGGAAGUGAAAUUUAUCCCAGCCCUGAGGAGGAUUUGUGGAAUUAAAAUCUCCCCAGCCAGA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	798	809	923	977	1019	1039	1081	1202	1271	1297	1326	1484	1502	1517	1592	1606	1610
Modification Positions	Y	m6A	m6A	m6A	m6A	Y	m6A	Y	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	1:150157417:+	1:150157428:+	1:150158874:+	1:150158928:+	1:150158970:+	1:150158990:+	1:150159032:+	1:150159153:+	1:150159222:+	1:150159248:+	1:150159277:+	1:150159435:+	1:150159453:+	1:150159468:+	1:150159543:+	1:150159557:+	1:150159561:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	8cMbzB4aD5Se ArijeGVTwYBw BkoLW2CBToyL KTLz8piFYdwC BtsJQJ3DteUq iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq kx7BHU7ZycYE iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	5aTkEfEpX8Xm msuJfBpJvM5H VyCX26p5UBRL 8cMbzB4aD5Se KTLz8piFYdwC BtsJQJ3DteUq kx7BHU7ZycYE iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	5Nnepx5V7yHo aHkqKEJkRYyb gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL 8cMbzB4aD5Se WiQcrNTGZHPT BtsJQJ3DteUq kx7BHU7ZycYE iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq kx7BHU7ZycYE iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq kx7BHU7ZycYE iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq kx7BHU7ZycYE iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	5Nnepx5V7yHo gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL ArijeGVTwYBw BkoLW2CBToyL WiQcrNTGZHPT BtsJQJ3DteUq kx7BHU7ZycYE iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	5Nnepx5V7yHo Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq kx7BHU7ZycYE iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	5Nnepx5V7yHo aHkqKEJkRYyb gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq kx7BHU7ZycYE iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq kx7BHU7ZycYE XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	5Nnepx5V7yHo Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq kx7BHU7ZycYE XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	5Nnepx5V7yHo aHkqKEJkRYyb Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq kx7BHU7ZycYE XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	5Nnepx5V7yHo aHkqKEJkRYyb gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq kx7BHU7ZycYE XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	5Nnepx5V7yHo aHkqKEJkRYyb gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL 8cMbzB4aD5Se KTLz8piFYdwC Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq kx7BHU7ZycYE XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	5Nnepx5V7yHo aHkqKEJkRYyb gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL 8cMbzB4aD5Se BkoLW2CBToyL WiQcrNTGZHPT Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq kx7BHU7ZycYE XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8