DNAmoreDB - A Database of Deoxyribozymes

DNAzyme description

 Reaction  Reacting groups  Substrates Product  Metal ion Linkage  Seq description
RNA cleavage Group 1 - 2'-OH of rA

Group 2 - vicinal phosphate

S: CTCTATCTATrAGGAAGTACCGCCGC
specific cleavage at desired position Na+
RNA phosphodiester N *
 Buffer conditions
*
 Yield (%) kcat/ kobs
>80 kobs = 0.1 min-1
 Catalytic region of the DNAzyme
GCGGCGGTACCAGGTCAAAGGTGGGTGAGGGGACGCCAAGAGTCCCCGCGGTTAGATAGAG
Notes
Truncated DNAzymes derived from NaA43 (trans-cleaving)

 Reported in...

Year of Publication First Author Laboratory Title PubMed ID DOI Reaction
2015 S-F Torabi Y Lu In vitro selection of a sodium-specific DNAzyme and its application in intracellular sensing None 10.1073/pnas.1420361112 RNA cleavage

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